-
1
-
-
0242500968
-
Informatics for unveiling hidden genome signatures
-
Abe, T., Kanaya, S., Kinouchbi, M., Ichiba, Y., Kozuki, T., and Ikemura, T. (2003) Informatics for unveiling hidden genome signatures. Genome Res 13: 693-705.
-
(2003)
Genome Res
, vol.13
, pp. 693-705
-
-
Abe, T.1
Kanaya, S.2
Kinouchbi, M.3
Ichiba, Y.4
Kozuki, T.5
Ikemura, T.6
-
2
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann, R.I., Ludwig, W., and Schleifer, K.H. (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59: 143-169.
-
(1995)
Microbiol Rev
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
3
-
-
0034554741
-
Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage
-
Béjà, O., Suzuki, M.T., Koonin, E.V., Aravind, L., Hadd, A., Nguyen, L.P., et al. (2000a) Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage. Environ Microbiol 2: 516-529.
-
(2000)
Environ Microbiol
, vol.2
, pp. 516-529
-
-
Béjà, O.1
Suzuki, M.T.2
Koonin, E.V.3
Aravind, L.4
Hadd, A.5
Nguyen, L.P.6
-
4
-
-
0034665853
-
Bacterial rhodopsin: Evidence for a new type of phototrophy in the sea
-
Béjà, O., Aravind, L., Koonin, E.V., Suzuki, M.T., Hadd, A., Nguyen, L.P. et al. (2000b) Bacterial rhodopsin: evidence for a new type of phototrophy in the sea. Science 289: 1902-1906.
-
(2000)
Science
, vol.289
, pp. 1902-1906
-
-
Béjà, O.1
Aravind, L.2
Koonin, E.V.3
Suzuki, M.T.4
Hadd, A.5
Nguyen, L.P.6
-
5
-
-
0035859080
-
Proteorhodopsin phototrophy in the ocean
-
Béjà, O., Spudich, E.N., Spudich, J.L., Leclerc, M., and DeLong, E.F. (2001) Proteorhodopsin phototrophy in the ocean. Nature 411: 786-789.
-
(2001)
Nature
, vol.411
, pp. 786-789
-
-
Béjà, O.1
Spudich, E.N.2
Spudich, J.L.3
Leclerc, M.4
DeLong, E.F.5
-
6
-
-
18844481026
-
A marine microbial consortium apparently mediating anaerobic oxidation of methane
-
Boetius, A., Ravenschlag, K., Schubert, C.J., Rickert, D., Widdel, F., Gieseke, A., et al. (2000) A marine microbial consortium apparently mediating anaerobic oxidation of methane. Nature 407: 623-626.
-
(2000)
Nature
, vol.407
, pp. 623-626
-
-
Boetius, A.1
Ravenschlag, K.2
Schubert, C.J.3
Rickert, D.4
Widdel, F.5
Gieseke, A.6
-
7
-
-
0036677450
-
Estimating prokaryotic diversity and its limits
-
Curtis, T.P., Sloan, W.T., and Scannell, J.W. (2002) Estimating prokaryotic diversity and its limits. Proc Natl Acad Sci USA 99: 10494-10499.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 10494-10499
-
-
Curtis, T.P.1
Sloan, W.T.2
Scannell, J.W.3
-
8
-
-
0036790017
-
Microbial population genomics and ecology
-
DeLong, E.F. (2002) Microbial population genomics and ecology. Curr Opin Microbiol 5: 520-524.
-
(2002)
Curr Opin Microbiol
, vol.5
, pp. 520-524
-
-
DeLong, E.F.1
-
9
-
-
0032823783
-
Genomic signature: Characterization and classification of species assessed by chaos game representation of sequences
-
Deschavanne, P.J., Giron, A., Vilain, J., Fagot, G., and Fertil, B. (1999) Genomic signature: characterization and classification of species assessed by chaos game representation of sequences. Mol Biol Evol 16: 1391-1399.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 1391-1399
-
-
Deschavanne, P.J.1
Giron, A.2
Vilain, J.3
Fagot, G.4
Fertil, B.5
-
10
-
-
0035049521
-
Genome-scale compositional comparisons in eukaryotes
-
Gentles, A.J., and Karlin, S. (2001) Genome-scale compositional comparisons in eukaryotes. Genome Res 11: 540-546.
-
(2001)
Genome Res
, vol.11
, pp. 540-546
-
-
Gentles, A.J.1
Karlin, S.2
-
11
-
-
0037478650
-
Complete genome sequence of the marine planctomycete Pirellula sp. strain 1
-
Glöckner, F.O., Kube, M., Bauer, M., Teeling, H., Lombardot, T., Ludwig, W., et al. (2003) Complete genome sequence of the marine planctomycete Pirellula sp. strain 1. Proc Natl Acad Sci USA 100: 8298-82303.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 8298-82303
-
-
Glöckner, F.O.1
Kube, M.2
Bauer, M.3
Teeling, H.4
Lombardot, T.5
Ludwig, W.6
-
12
-
-
0027300694
-
Nucleotide, dinucleotide and trinucleotide frequencies explain patterns observed in chaos game representations of DNA sequences
-
Goldman, N. (1993) Nucleotide, dinucleotide and trinucleotide frequencies explain patterns observed in chaos game representations of DNA sequences. Nucleic Acids Res 21: 2487-2491.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 2487-2491
-
-
Goldman, N.1
-
13
-
-
0032173634
-
Global dinucleotide signatures and analysis of genomic heterogeneity
-
Karlin, S. (1998) Global dinucleotide signatures and analysis of genomic heterogeneity. Curr Opin Microbiol 1: 598-610.
-
(1998)
Curr Opin Microbiol
, vol.1
, pp. 598-610
-
-
Karlin, S.1
-
14
-
-
0028606501
-
Comparisons of eukaryotic genomic sequences
-
Karlin, S., and Ladunga, I. (1994) Comparisons of eukaryotic genomic sequences. Proc Natl Acad Sci USA 91: 12832-12836.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 12832-12836
-
-
Karlin, S.1
Ladunga, I.2
-
15
-
-
0029060923
-
Dinucleotide relative abundance extremes: A genomic signature
-
Karlin, S., and Burge, C. (1995) Dinucleotide relative abundance extremes: a genomic signature. Trends Genet 11: 283-290.
-
(1995)
Trends Genet
, vol.11
, pp. 283-290
-
-
Karlin, S.1
Burge, C.2
-
16
-
-
0033816775
-
Predicted highly expressed genes of diverse prokaryotic genomes
-
Karlin, S., and Mrázek, J. (2000) Predicted highly expressed genes of diverse prokaryotic genomes. J Bacteriol 182: 5238-5250.
-
(2000)
J Bacteriol
, vol.182
, pp. 5238-5250
-
-
Karlin, S.1
Mrázek, J.2
-
17
-
-
0028568008
-
Heterogeneity of genomes: Measures and values
-
Karlin, S., Ladunga, I., and Blaisdell, B.E. (1994) Heterogeneity of genomes: measures and values. Proc Natl Acad Sci USA 91: 12837-12841.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 12837-12841
-
-
Karlin, S.1
Ladunga, I.2
Blaisdell, B.E.3
-
18
-
-
0032426005
-
Comparative DNA analysis across diverse genomes
-
Karlin, S., Campbell, A.M., and Mrázek, J. (1998) Comparative DNA analysis across diverse genomes. Annu Rev Genet 32: 185-225.
-
(1998)
Annu Rev Genet
, vol.32
, pp. 185-225
-
-
Karlin, S.1
Campbell, A.M.2
Mrázek, J.3
-
19
-
-
0037047625
-
Microbial reefs in the black sea fueled by anaerobic oxidation of methane
-
Michaelis, W., Seifert, R., Nauhaus, K., Treude, T., Thiel, V., Blumenberg, M., et al. (2002) Microbial reefs in the black sea fueled by anaerobic oxidation of methane. Science 297: 1013-1015.
-
(2002)
Science
, vol.297
, pp. 1013-1015
-
-
Michaelis, W.1
Seifert, R.2
Nauhaus, K.3
Treude, T.4
Thiel, V.5
Blumenberg, M.6
-
20
-
-
0032582395
-
Genes from nine genomes are separated into their organisms in the dinucleotide composition space
-
Nakashima, H., Ota, M., Nishikawa, K., and Ooi, T. (1998) Genes from nine genomes are separated into their organisms in the dinucleotide composition space. DNA Res 5: 251-259.
-
(1998)
DNA Res
, vol.5
, pp. 251-259
-
-
Nakashima, H.1
Ota, M.2
Nishikawa, K.3
Ooi, T.4
-
21
-
-
0037315735
-
Evolutionary implications of microbial genome tetranucleotide frequency biases
-
Pride, D.T., Meinersmann, R.J., Wassenaar, T.M., and Blaser, M.J. (2003) Evolutionary implications of microbial genome tetranucleotide frequency biases. Genome Res 13: 145-158.
-
(2003)
Genome Res
, vol.13
, pp. 145-158
-
-
Pride, D.T.1
Meinersmann, R.J.2
Wassenaar, T.M.3
Blaser, M.J.4
-
22
-
-
18844481269
-
Cloning the soil metagenome: A strategy for accessing the genetic and functional diversity of uncultured microorgansims
-
Rondon, M.R., August, P.R., Bettermann, A.D., Bradly, S.F., Grossman, T.H., Liles, M.R., et al. (2000) Cloning the soil metagenome: a strategy for accessing the genetic and functional diversity of uncultured microorgansims. Appl Environ Microbiol 66: 2541-2547.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 2541-2547
-
-
Rondon, M.R.1
August, P.R.2
Bettermann, A.D.3
Bradly, S.F.4
Grossman, T.H.5
Liles, M.R.6
-
23
-
-
0034887748
-
Capturing whole-genome characteristics in short sequences using a naïve Bayesian classifier
-
Sandberg, R., Winberg, G., Bränden, C.I., Kaske, A., Ernberg, I., and Cöster, J. (2001) Capturing whole-genome characteristics in short sequences using a naïve Bayesian classifier. Genome Res 11: 1404-1409.
-
(2001)
Genome Res
, vol.11
, pp. 1404-1409
-
-
Sandberg, R.1
Winberg, G.2
Bränden, C.I.3
Kaske, A.4
Ernberg, I.5
Cöster, J.6
-
24
-
-
0029365207
-
Exceptional motifs in different Markov chain models for a statistical analysis of DNA sequences
-
Schbath, S., Prum, B., and de Turckheim. E. (1995) Exceptional motifs in different Markov chain models for a statistical analysis of DNA sequences. J Comput Biol 2: 417-437.
-
(1995)
J Comput Biol
, vol.2
, pp. 417-437
-
-
Schbath, S.1
Prum, B.2
De Turckheim, E.3
-
25
-
-
0037805644
-
Biotechnological prospects from metagenomics
-
Schloss, P.D., and Handelsman, J. (2003) Biotechnological prospects from metagenomics. Curr Opin Biotechnol 14: 303-310.
-
(2003)
Curr Opin Biotechnol
, vol.14
, pp. 303-310
-
-
Schloss, P.D.1
Handelsman, J.2
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