-
1
-
-
0017078219
-
Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C on cornavirus RNA molecules
-
Bender,W. and Davidson,N. (1976) Mapping of poly(A) sequences in the electron microscope reveals unusual structure of type C on cornavirus RNA molecules. Cell, 7, 595-607.
-
(1976)
Cell
, vol.7
, pp. 595-607
-
-
Bender, W.1
Davidson, N.2
-
2
-
-
0017169814
-
RD-114, baboon, and woolly monkey viral RNA's compared in size and structure
-
Kung,H.J., Hu,S., Bender,W., Bailey,J.M., Davidson,N., Nicolson,M.O. and McAllister,R.M. (1976) RD-114, baboon, and woolly monkey viral RNA's compared in size and structure. Cell, 7, 609-620.
-
(1976)
Cell
, vol.7
, pp. 609-620
-
-
Kung, H.J.1
Hu, S.2
Bender, W.3
Bailey, J.M.4
Davidson, N.5
Nicolson, M.O.6
McAllister, R.M.7
-
3
-
-
0032408484
-
Retroviral. RNA dimer linkage
-
Greatorex,J. and Lever,A. (1998) Retroviral. RNA dimer linkage. J. Gen. Virol., 79, 2877-2882.
-
(1998)
J. Gen. Virol.
, vol.79
, pp. 2877-2882
-
-
Greatorex, J.1
Lever, A.2
-
4
-
-
0033885963
-
In the beginning: Genome recognition, RNA encapsidation and the initiation of complex retrovirus assembly
-
Jewell,N.A. and Mansky,L.M. (2000) In the beginning: genome recognition, RNA encapsidation and the initiation of complex retrovirus assembly. J. Gen. Virol., 81, 1889-1899.
-
(2000)
J. Gen. Virol.
, vol.81
, pp. 1889-1899
-
-
Jewell, N.A.1
Mansky, L.M.2
-
5
-
-
0025598002
-
Cis elements and trans-acting factors involved in the RNA dimerization of the human immunodeficiency virus HIV-1
-
Darlix,J.L., Gabus,C., Nugeyre,M.T., Clavel,F. and Barre-Sinoussi,F. (1990) Cis elements and trans-acting factors involved in the RNA dimerization of the human immunodeficiency virus HIV-1. J. Mol. Biol., 216, 689-699.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 689-699
-
-
Darlix, J.L.1
Gabus, C.2
Nugeyre, M.T.3
Clavel, F.4
Barre-Sinoussi, F.5
-
6
-
-
0028027708
-
A 19-nucleotide sequence upstream of the 5′ major splice donor is part of the dimerization domain of human immunodeficiency virus 1 genomic RNA
-
Laughrea,M. and Jette,L. (1994) A 19-nucleotide sequence upstream of the 5′ major splice donor is part of the dimerization domain of human immunodeficiency virus 1 genomic RNA. Biochemistry, 33, 13464-13474.
-
(1994)
Biochemistry
, vol.33
, pp. 13464-13474
-
-
Laughrea, M.1
Jette, L.2
-
7
-
-
0028239204
-
Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro
-
Skripkin,E., Paillart,J.C., Marquet,R., Ehresmann,B. and Ehresmann,C. (1994) Identification of the primary site of the human immunodeficiency virus type 1 RNA dimerization in vitro. Proc. Natl Acad. Sci. USA, 91, 4945-4949.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 4945-4949
-
-
Skripkin, E.1
Paillart, J.C.2
Marquet, R.3
Ehresmann, B.4
Ehresmann, C.5
-
8
-
-
9244219568
-
The human immunodeficiency virus type 1 encapsidation site is a multipartite RNA element composed of functional hairpin structures
-
McBride,M.S. and Panganiban,A.T. (1996) The human immunodeficiency virus type 1 encapsidation site is a multipartite RNA element composed of functional hairpin structures. J. Virol., 70, 2963-2973.
-
(1996)
J. Virol.
, vol.70
, pp. 2963-2973
-
-
McBride, M.S.1
Panganiban, A.T.2
-
9
-
-
0029972930
-
A loop-loop 'kissing' complex is the essential part of the dimer linkage of genomic HIV-1 RNA
-
Paillart,J.C., Skripkin,E., Ehresmann,B., Ehresmann,C. and Marquet,R. (1996) A loop-loop 'kissing' complex is the essential part of the dimer linkage of genomic HIV-1 RNA. Proc. Natl Acad. Sci. USA, 93, 5572-5577.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 5572-5577
-
-
Paillart, J.C.1
Skripkin, E.2
Ehresmann, B.3
Ehresmann, C.4
Marquet, R.5
-
10
-
-
0029868164
-
A kissing complex together with a stable dimer is involved in the HIV-1 Lai RNA dimerization process in vitro
-
Muriaux,D., Fosse,P. and Paoletti,J. (1996) A kissing complex together with a stable dimer is involved in the HIV-1 Lai RNA dimerization process in vitro. Biochemistry, 35, 5075-5082.
-
(1996)
Biochemistry
, vol.35
, pp. 5075-5082
-
-
Muriaux, D.1
Fosse, P.2
Paoletti, J.3
-
11
-
-
0030019828
-
Kissing-loop model of HIV-1 genome dimerization: HIV-1 RNAs can assume alternative dimeric forms, and all sequences upstream or downstream of hairpin 248-271 are dispensable for dimer formation
-
Laughrea,M. and Jette,L. (1996) Kissing-loop model of HIV-1 genome dimerization: HIV-1 RNAs can assume alternative dimeric forms, and all sequences upstream or downstream of hairpin 248-271 are dispensable for dimer formation. Biochemistry, 35, 1589-1598.
-
(1996)
Biochemistry
, vol.35
, pp. 1589-1598
-
-
Laughrea, M.1
Jette, L.2
-
12
-
-
0029900161
-
Evidence that a kissing loop structure facilitates genomic RNA dimerisation in HIV-1
-
Haddrick,M., Lear,A.L., Cann,A.J. and Heaphy,S. (1996) Evidence that a kissing loop structure facilitates genomic RNA dimerisation in HIV-1. J. Mol. Biol., 259, 58-68.
-
(1996)
J. Mol. Biol.
, vol.259
, pp. 58-68
-
-
Haddrick, M.1
Lear, A.L.2
Cann, A.J.3
Heaphy, S.4
-
13
-
-
9444271764
-
Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA
-
Clever,J.L., Wong,M.L. and Parslow,T.G. (1996) Requirements for kissing-loop-mediated dimerization of human immunodeficiency virus RNA. J. Virol., 70, 5902-5908.
-
(1996)
J. Virol.
, vol.70
, pp. 5902-5908
-
-
Clever, J.L.1
Wong, M.L.2
Parslow, T.G.3
-
14
-
-
0033520120
-
Monomer-dimer equilibrium constants of RNA in the dimer initiation site of human immunodeficiency virus type 1
-
Shubsda,M.F., McPike,M.P., Goodisman,J. and Dabrowiak,J.C. (1999) Monomer-dimer equilibrium constants of RNA in the dimer initiation site of human immunodeficiency virus type 1. Biochemistry, 38, 10147-10157.
-
(1999)
Biochemistry
, vol.38
, pp. 10147-10157
-
-
Shubsda, M.F.1
McPike, M.P.2
Goodisman, J.3
Dabrowiak, J.C.4
-
15
-
-
0035937142
-
Identification of the in vitro HIV-2/SIV RNA dimerization site reveals striking differences with HIV-1
-
Jossinet,F., Lodmell,J.S., Ehresmann,C., Ehresmann,B. and Marquet,R. (2001) Identification of the in vitro HIV-2/SIV RNA dimerization site reveals striking differences with HIV-1. J. Biol. Chem., 276, 5598-5604.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 5598-5604
-
-
Jossinet, F.1
Lodmell, J.S.2
Ehresmann, C.3
Ehresmann, B.4
Marquet, R.5
-
16
-
-
0036301440
-
Alternate usage of two dimerization initiation sites in HIV-2 viral RNA in vitro
-
Lanchy,J.M. and Lodmell,J.S. (2002) Alternate usage of two dimerization initiation sites in HIV-2 viral RNA in vitro. J. Mol. Biol., 319, 637-648.
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 637-648
-
-
Lanchy, J.M.1
Lodmell, J.S.2
-
17
-
-
0037096843
-
Regulated HIV-2 RNA dimerization by means of alternative RNA conformations
-
Dirac,A.M., Huthoff,H., Kjems,J. and Berkhout,B. (2002) Regulated HIV-2 RNA dimerization by means of alternative RNA conformations. Nucleic Acids Res., 30, 2647-2655.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 2647-2655
-
-
Dirac, A.M.1
Huthoff, H.2
Kjems, J.3
Berkhout, B.4
-
18
-
-
0035943708
-
The dimer initiation site hairpin mediates dimerization of the human immunodeficiency virus, type 2 RNA genome
-
Dirac,A.M., Huthoff,H., Kjems,J. and Berkhout,B. (2001) The dimer initiation site hairpin mediates dimerization of the human immunodeficiency virus, type 2 RNA genome. J. Biol. Chem., 276, 32345-32352.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 32345-32352
-
-
Dirac, A.M.1
Huthoff, H.2
Kjems, J.3
Berkhout, B.4
-
19
-
-
0037432329
-
Elements located upstream and downstream of the major splice donor site influence the ability of HIV-2 leader RNA to dimerize in vitro
-
Lanchy,J.M., Rentz,C.A., Ivanovitch,J.D. and Lodmell,J.S. (2003) Elements located upstream and downstream of the major splice donor site influence the ability of HIV-2 leader RNA to dimerize in vitro. Biochemistry, 42, 2634-2642.
-
(2003)
Biochemistry
, vol.42
, pp. 2634-2642
-
-
Lanchy, J.M.1
Rentz, C.A.2
Ivanovitch, J.D.3
Lodmell, J.S.4
-
20
-
-
0035194356
-
The major human immunodeficiency virus type 2 (HIV-2) packaging signal is present on all HIV-2 RNA species: Cotranslational RNA encapsidation and limitation of Gag protein confer specificity
-
Griffin,S.D., Allen,J.F. and Lever,A.M. (2001) The major human immunodeficiency virus type 2 (HIV-2) packaging signal is present on all HIV-2 RNA species: cotranslational RNA encapsidation and limitation of Gag protein confer specificity. J. Virol., 75, 12058-12069.
-
(2001)
J. Virol.
, vol.75
, pp. 12058-12069
-
-
Griffin, S.D.1
Allen, J.F.2
Lever, A.M.3
-
21
-
-
0742289613
-
RNA interactions in the 5′ region of the HIV-1 genome
-
Damgaard,C.K., Andersen,E.S., Knudsen,B., Gorodkin,J. and Kjems,J. (2004) RNA interactions in the 5′ region of the HIV-1 genome. J. Mol. Biol., 336, 369-379.
-
(2004)
J. Mol. Biol.
, vol.336
, pp. 369-379
-
-
Damgaard, C.K.1
Andersen, E.S.2
Knudsen, B.3
Gorodkin, J.4
Kjems, J.5
-
22
-
-
0024991802
-
Simian immunodeficiency virus displays complex patterns of RNA splicing
-
Viglianti,G.A., Sharma,P.L. and Mullins,J.I. (1990) Simian immunodeficiency virus displays complex patterns of RNA splicing. J. Virol., 64, 4207-4216.
-
(1990)
J. Virol.
, vol.64
, pp. 4207-4216
-
-
Viglianti, G.A.1
Sharma, P.L.2
Mullins, J.I.3
-
23
-
-
0027151978
-
Human immunodeficiency virus type 2 multiply spliced transcripts
-
Chatterjee,P., Garzino-Demo,A., Swinney,P. and Arya,S.K. (1993) Human immunodeficiency virus type 2 multiply spliced transcripts. AIDS Res. Hum. Retroviruses, 9, 331-335.
-
(1993)
AIDS Res. Hum. Retroviruses
, vol.9
, pp. 331-335
-
-
Chatterjee, P.1
Garzino-Demo, A.2
Swinney, P.3
Arya, S.K.4
-
24
-
-
0023657622
-
Genome organization and transactivation of the human immunodeficiency virus type 2
-
Guyader,M., Emerman,M., Sonigo,P., Clavel,F., Montagnier,L. and Alizon,M. (1987) Genome organization and transactivation of the human immunodeficiency virus type 2. Nature, 326, 662-669.
-
(1987)
Nature
, vol.326
, pp. 662-669
-
-
Guyader, M.1
Emerman, M.2
Sonigo, P.3
Clavel, F.4
Montagnier, L.5
Alizon, M.6
-
25
-
-
0030273508
-
RNA splice site utilization by simian immunodeficiency viruses derived from sooty mangabey monkeys
-
Reinhart,T.A., Rogan,M.J. and Haase,A.T. (1996) RNA splice site utilization by simian immunodeficiency viruses derived from sooty mangabey monkeys. Virology, 224, 338-344.
-
(1996)
Virology
, vol.224
, pp. 338-344
-
-
Reinhart, T.A.1
Rogan, M.J.2
Haase, A.T.3
-
26
-
-
0004040205
-
-
Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, NM
-
Kuiken,C., Foley,B., Hahn,B., Marx,P., McCutchan,F., Mellors,J., Wolinsky,S. and Korber,B. (2001) HIV Sequence Compendium 2001. Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, NM.
-
(2001)
HIV Sequence Compendium 2001
-
-
Kuiken, C.1
Foley, B.2
Hahn, B.3
Marx, P.4
McCutchan, F.5
Mellors, J.6
Wolinsky, S.7
Korber, B.8
-
27
-
-
0028333978
-
Dimerization of human immunodeficiency virus type 1 RNA involves sequences located upstream of the splice donor site
-
Marquet,R., Paillart,J.C., Skripkin,E., Ehresmann,C. and Ehresmann,B. (1994) Dimerization of human immunodeficiency virus type 1 RNA involves sequences located upstream of the splice donor site. Nucleic Acids Res., 22, 145-151.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 145-151
-
-
Marquet, R.1
Paillart, J.C.2
Skripkin, E.3
Ehresmann, C.4
Ehresmann, B.5
-
28
-
-
0042307264
-
A structural linkage between the dimerization and encapsidation signals in HIV-2 leader RNA
-
Lanchy,J.M., Ivanovitch,J.D. and Lodmell,J.S. (2003) A structural linkage between the dimerization and encapsidation signals in HIV-2 leader RNA. RNA, 9, 1007-1018.
-
(2003)
RNA
, vol.9
, pp. 1007-1018
-
-
Lanchy, J.M.1
Ivanovitch, J.D.2
Lodmell, J.S.3
-
29
-
-
0026765461
-
Role of TAR RNA splicing in translational regulation of simian immunodeficiency virus from rhesus macaques
-
Viglianti,G.A., Rubinstein,E.P. and Graves,K.L. (1992) Role of TAR RNA splicing in translational regulation of simian immunodeficiency virus from rhesus macaques. J. Virol., 66, 4824-4833.
-
(1992)
J. Virol.
, vol.66
, pp. 4824-4833
-
-
Viglianti, G.A.1
Rubinstein, E.P.2
Graves, K.L.3
-
30
-
-
0025854096
-
Simian immunodeficiency virus (SIVmac) exhibits complex splicing for tat, rev, and env mRNA
-
Unger,R.E., Stout,M.W. and Luciw,P.A. (1991) Simian immunodeficiency virus (SIVmac) exhibits complex splicing for tat, rev, and env mRNA. Virology, 182, 177-185.
-
(1991)
Virology
, vol.182
, pp. 177-185
-
-
Unger, R.E.1
Stout, M.W.2
Luciw, P.A.3
-
31
-
-
0032502753
-
Multiply spliced env and nef transcripts of simian immunodeficiency virus from West African green monkey (SIVagm-sab)
-
Bibollet-Ruche,F., Cuny,G., Pourrut,X., Brengues,C., Galat-Luong,A., Galat,G. and Delaporte,E. (1998) Multiply spliced env and nef transcripts of simian immunodeficiency virus from West African green monkey (SIVagm-sab). AIDS Res. Hum. Retroviruses, 14, 515-519.0
-
(1998)
AIDS Res. Hum. Retroviruses
, vol.14
-
-
Bibollet-Ruche, F.1
Cuny, G.2
Pourrut, X.3
Brengues, C.4
Galat-Luong, A.5
Galat, G.6
Delaporte, E.7
-
32
-
-
0042353702
-
The packaging signal of simian immunodeficiency virus is upstream of the major splice donor at a distance from the RNA cap site similar to that of human immunodeficiency virus types 1 and 2
-
Strappe,P.M., Greatorex,J., Thomas,J., Biswas,P., McCann,E. and Lever,A.M. (2003) The packaging signal of simian immunodeficiency virus is upstream of the major splice donor at a distance from the RNA cap site similar to that of human immunodeficiency virus types 1 and 2. J. Gen. Virol., 84, 2423-2430.
-
(2003)
J. Gen. Virol.
, vol.84
, pp. 2423-2430
-
-
Strappe, P.M.1
Greatorex, J.2
Thomas, J.3
Biswas, P.4
McCann, E.5
Lever, A.M.6
-
33
-
-
0032975747
-
Human immunodeficiency virus types 1 and 2 differ in the predominant mechanism used for selection of genomic RNA for encapsidation
-
Kaye,J.F. and Lever,A.M. (1999) Human immunodeficiency virus types 1 and 2 differ in the predominant mechanism used for selection of genomic RNA for encapsidation. J. Virol., 73, 3023-3031.
-
(1999)
J. Virol.
, vol.73
, pp. 3023-3031
-
-
Kaye, J.F.1
Lever, A.M.2
-
34
-
-
0038703511
-
The simian immunodeficiency virus 5′ untranslated leader sequence plays a role in intracellular viral protein accumulation and in RNA packaging
-
Patel,J., Wang,S.W., Izmailova,E. and Aldovini,A. (2003) The simian immunodeficiency virus 5′ untranslated leader sequence plays a role in intracellular viral protein accumulation and in RNA packaging. J. Virol., 77, 6284-6292.
-
(2003)
J. Virol.
, vol.77
, pp. 6284-6292
-
-
Patel, J.1
Wang, S.W.2
Izmailova, E.3
Aldovini, A.4
|