Characterization and genetic diversity of sugarcane streak mosaic virus causing mosaic in sugarcane

Virus Genes

Volumn 36, Issue 3, 2008, Pages 553-564

  Viswanathan, R ^a   Balamuralikrishnan, M ^a   Karuppaiah, R ^a  

^a SUGARCANE BREEDING INSTITUTE   (India)

Author keywords

Classification; Genetic variability; Phylogenetic analysis; Potyviridae; Sugarcane; Sugarcane streak mosaic virus; Susmovirus

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; GENE LOCATION; GENE SEQUENCE; GENETIC VARIABILITY; LONGEVITY; MOLECULAR CLONING; MOLECULAR MODEL; MOSAIC VIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLANT LEAF; POTYVIRUS; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SUGARCANE; UNINDEXED SEQUENCE; VIRUS ISOLATION;

AMINO ACID SEQUENCE; BASE SEQUENCE; DNA, VIRAL; GENOME, VIRAL; MOLECULAR SEQUENCE DATA; OPEN READING FRAMES; PHYLOGENY; PLANT DISEASES; POTYVIRIDAE; SACCHARUM; SEQUENCE HOMOLOGY; VARIATION (GENETICS); VIRAL PROTEINS;

APHIDIDAE; IPOMOVIRUS; MELANAPHIS; POTYVIRIDAE; POTYVIRUS; RYMOVIRUS; SUGARCANE STREAK MOSAIC VIRUS; TRITIMOVIRUS;

EID: 43049114897     PISSN: 09208569     EISSN: 1572994X     Source Type: Journal    
DOI: 10.1007/s11262-008-0228-y     Document Type: Article

References (45)

1. C.A. Barber, Int. Sugar J 23, 12-19 (1921)
2. H. Koike, A.G. Gillespie, in Disease of Sugarcane-Major Diseases, ed. by C. Ricaud, B.T. Egan, A.G. Gillespie, C.G. Hughes (Elsevier, Amsterdam, 1989), pp. 301-322
3. D.D. Shukla, C.W. Ward, A.A. Brunt, The Potyviridae (CAB International, Cambridge University Press, Cambridge, 1994), p. 516
4. N.M. Mckern, D.D. Shukla, R.D. Toler, S.G. Jensen, M. Tosic, R.E. Ford, O. Leon, C.W. Ward, Phytopathology 81, 1025-1029 (1991)
5. D.D. Shukla, M. Tosic, J. Jilka, R.E. Ford, R.W. Taker, M.A.C. Langham, Phytopathology 79, 223-229 (1989)
6. D.L. Seifers, R. Salomon, V. Marie-Jeanne, B. Alliot, P. Signoret, S. Harber, A. Loboda, W. Ens, Y.M. She, K.G. Standing, Phytopathology 90, 505-513 (2000)
7. R. Gotz, E. Maiss, Arch. Virol. 147, 1573-1583 (2002)
8. Z. Fan, H. Chen, S. Cai, C. Deng, W. Wang, X. Liang, H. Li, Arch. Virol. 148, 1219-1224 (2003)
9. M.P. Grisham, in A Guide to Sugarcane Diseases, ed. by P. Rott, R.A. Bailey, J.C. Comstock, B.J. Croft, A.S. Saumtally (CIRAD-ISSCT, CIRAD Publication Services, Montepellier, France, 2000), pp. 249-254
10. D.D. Shukla, M.J. Frenkel, N.M. Mckern, C.W. Ward, J. Jilka, M. Tosic, R.E. Ford, Arch. Virol. [Suppl.] 5, 363-373 (1992)
11. E. Kondaiah, M.V. Nayudu, Curr. Sci. 53, 273-275 (1984)
12. E. Kondaiah, M.V. Nayudu, Sugar Cane 4, 11-14 (1985)
13. J.S. Hall, B. Adams, T.J. Parsons, R. French, L.C. Lane, S.G. Jensen, Mol. Phylogenet. Evol. 10, 323-332 (1998)
14. A.G. Gillaspie Jr., R.G. Mock, F.F. Smith, Proc. Int. Soc. Sugar Cane Technol. 16, 347-355 (1978)
15. M. Hema, J. Joseph, K. Gobinath, P. Sreenivasulu, H.S. Savithri, Arch. Virol. 144, 479-490 (1999)
16. M. Chatenet, C. Mazarin, J.C. Girard, E. Fernandez, D. Gargani, G.P. Rao, M. Royer, B. Lockhart, P. Rott, Sugarcane Int. 23, 12-15, 28 (2005)
17. R. Viswanathan, M. Balamuralikrishnan, R. Karuppaiah, Sugarcane Int. 25, 6-14 (2007)
18. D.J. Heinz, in Sugarcane Varietal Improvement, ed. by M.K. Naidu, T.V. Sreenivasan, M.N. Premachandran (The Director, Sugarcane Breeding Institute, Coimbatore, 1989), p. 364
19. J.D. Thompson, D.G. Higgins, T.J. Gibson, Nucleic Acid Res. 22, 4673-4680 (1994)
20. T.A. Hall, Nucl. Acids Symp. Ser. 41, 95-98 (1999)
21. C.W. Ward, G.F. Willer, D.D. Shukla, A. Gibbs, in Molecular Basis of Virus Evolution, ed. by A.J. Gibbs, C.H. Calisher, G. Arenal (Press Syndicate of the University of Cambridge, Cambridge, 1995), pp. 447-500
22. S. Kashiwazaki, Y. Minobe, T. Omura, H. Hibino, J. Gen. Virol. 71, 2781-2790 (1990)
23. E. Peerenboom, M. Prols, J. Schell, H.H. Steinbiss, A.D. Davidson, J. Gen. Virol. 73, 1303-1308 (1992)
24. D. Colinet, J. Krummert, P. Lepoivre, Arch. Virol. 141, 125-135 (1996)
25. D.C. Stenger, J.S. Hall, I.R. Choi, R. French, Phytopathology 88, 782-787 (1998)
26. J. Schubert, F. Rabenstein, E. Proll, Agronomie 15, 447-452 (1995)
27. S.N. Salm, M.E.C. Rey, N.L. Robertson, R. French, F. Rabenstein, J. Schubert, Arch. Virol. 141, 2115-2127 (1996)
28. S.N. Salm, M.E.C. Rey, E.P. Rybicki, Arch. Virol. 141, 2237-2242 (1996)
29. R. Gotz, E. Maiss, J. Gen. Virol. 76, 2035-2042 (1995)
30. K.D. Chenault, R.M. Hunger, J.L. Sherwood, Virus Genes 13, 187-188 (1996)
31. C.L. Niblett, K.R. Zagula, L.A. Calvert, T.L. Kendall, D.M. Stark, C.E. Smith, R.N. Beachy, S.A. Lommel, J. Gen. Virol. 72, 499-504 (1991)
32. C.M. Fauquet, M.A. Mayo, J. Maniloff, U. Desselberger, L.A. Ball (eds.), Virus Taxonomy. Classification and Nomenclature of Viruses (8th ICTV Report, Academic Press, Elsevier, 2005), p. 1217
33. R.K. Gaur, M. Singh, A. Singh, L.C. Mishra, G.P. Rao, Sugarcane Int. 24, 13-17 (2006)
34. M.P. Grisham, Y.P. Pan, Plant Dis. 91, 453-458 (2007)
35. M.F. Perera, M.P. Filippone, J. Ramallo, M.I. Cuenya, M.L. Garcia, A.P. Castagnaro, Proc. Int. Soc. Sugar Cane Technol. 26, 988-992 (2007)
36. F. Garcia-Arenal, A. Fraile, J.M. Malpica, Int. Microbiol. 6, 225-232 (2003)
37. J.W. Drake, J.J. Holland, Proc. Natl. Acad. Sci. USA 96, 13910-13913 (1999)
38. M. Hema, P. Sreenivasulu, H.S. Savithri, Arch. Virol. 147, 1997-2007 (2002)
39. D.D. Shukla, C.W. Ward, J. Gen. Virol. 69, 2703-2710 (1988)
40. C.W. Ward, N.M. Mckern, M.J. Frenkel, D.D. Shukla, Arch. Virol. [Suppl.] 5, 283-297 (1992)
41. M.H.V. Van Regenmortel, D.H.L. Bishop, C.M. Fauquet, M.A. Mayo, J. Maniloff, C.H. Calisher, Arch. Virol. 142, 1505-1518 (1997)
42. P.H. Berger, O.W. Barnett, A.A. Brunt, D. Colinet, J.R. Edwardson, J. Hammond, J.H. Hill, R.L. Jordon, W. Kashiwazaki, K. Makkouk, G. Morales, E.P. Rybicki, N. Spence, S.T. Ohki, I. Uyeda, A. van Zaayan, H.J. Vetten, in Virus Taxonomy: Seventh Report of the International Committee on Taxonomy of Viruses, ed. by M.H.V. van Regenmortel, C.M. Fauquet, D.H.L. Bishop, E.B. Carstens, M.K. Estes, S.M. Lemons, J. Maniloff, M.A. Mayo, C.R. Pringle, R.B. Wickner (Academic Press, New York, 2000)
43. D.A. Steinhauer, J.C. De la Torre, J.J. Holland, J. Virol. 63, 2063-2071 (1989)
44. D.A. Steinhauer, J.C. De la Torre, E. Meier, J.J. Holland, J. Virol. 63, 2072-2080 (1989)
45. P.F. Tennant, C. Gonsalves, K.S. Ling, M. Fitch, R. Manshardt, J.L. Slightom, D. Gonslaves, Phytopathology 84, 1359-1366 (1994)