메뉴 건너뛰기




Volumn 192, Issue 1, 2008, Pages 159-166

NMR bioreactor development for live in-situ microbial functional analysis

Author keywords

Bio based products; Bioenergy; Bioreactor; Ethanol fermentation; Eubacterium aggregans; In vivo metabolomics; Nuclear magnetic resonance (NMR) spectroscopy

Indexed keywords

BACTERIA; BIOREACTORS; ETHANOL; FERMENTATION; FRUCTOSE; FUNCTIONAL ANALYSIS; GLUCOSE; MICROBIOLOGY;

EID: 43049114501     PISSN: 10907807     EISSN: 10960856     Source Type: Journal    
DOI: 10.1016/j.jmr.2008.02.014     Document Type: Article
Times cited : (25)

References (40)
  • 2
    • 0344308452 scopus 로고    scopus 로고
    • NMR and microbiology: from physiology to metabolomics
    • Grivet J.P., Delort A.M., and Portais J.C. NMR and microbiology: from physiology to metabolomics. Biochimie 85 (2003) 823-840
    • (2003) Biochimie , vol.85 , pp. 823-840
    • Grivet, J.P.1    Delort, A.M.2    Portais, J.C.3
  • 3
    • 0035852624 scopus 로고    scopus 로고
    • modeling and control of bioprocesses during the last 20 years
    • Schugerl K., and monitoring P.i. modeling and control of bioprocesses during the last 20 years. J. Biotechnol. 85 (2001) 149-173
    • (2001) J. Biotechnol. , vol.85 , pp. 149-173
    • Schugerl, K.1    monitoring, P.i.2
  • 4
    • 0019305896 scopus 로고
    • Proton correlation nuclear magnetic resonance study of metabolic regulations and pyruvate transport in anaerobic Escherichia coli cells
    • Ogino T., Arata Y., and Fujiwara S. Proton correlation nuclear magnetic resonance study of metabolic regulations and pyruvate transport in anaerobic Escherichia coli cells. Biochemistry 19 (1980) 3684-3691
    • (1980) Biochemistry , vol.19 , pp. 3684-3691
    • Ogino, T.1    Arata, Y.2    Fujiwara, S.3
  • 5
    • 0024448182 scopus 로고
    • Anaerobic fermentation balance of Escherichia coli as observed by in vivo nuclear magnetic resonance spectroscopy
    • Alam K.Y., and Clark D.P. Anaerobic fermentation balance of Escherichia coli as observed by in vivo nuclear magnetic resonance spectroscopy. J. Bacteriol. 171 (1989) 6213-6217
    • (1989) J. Bacteriol. , vol.171 , pp. 6213-6217
    • Alam, K.Y.1    Clark, D.P.2
  • 6
    • 0034193560 scopus 로고    scopus 로고
    • Biotransformations monitored in situ by proton nuclear magnetic resonance spectroscopy
    • Brecker L., and Ribbons D.W. Biotransformations monitored in situ by proton nuclear magnetic resonance spectroscopy. Trends Biotechnol. 18 (2000) 197-202
    • (2000) Trends Biotechnol. , vol.18 , pp. 197-202
    • Brecker, L.1    Ribbons, D.W.2
  • 7
    • 0036311966 scopus 로고    scopus 로고
    • Monitoring of inorganic polyphosphate dynamics in Corynebacterium glutamicum using a novel oxygen sparger for real time P-31 in vivo NMR
    • Lambert C., Weuster-Botz D., Weichenhain R., Kreutz E.W., De Graaf A.A., and Schoberth S.M. Monitoring of inorganic polyphosphate dynamics in Corynebacterium glutamicum using a novel oxygen sparger for real time P-31 in vivo NMR. Acta Biotechnol. 22 (2002) 245-260
    • (2002) Acta Biotechnol. , vol.22 , pp. 245-260
    • Lambert, C.1    Weuster-Botz, D.2    Weichenhain, R.3    Kreutz, E.W.4    De Graaf, A.A.5    Schoberth, S.M.6
  • 8
    • 0027609359 scopus 로고
    • Observations of aerobic, growing Escherichia coli metabolism using an online nuclear magnetic resonance spectroscopy system
    • Chen R.Z., and Bailey J.E. Observations of aerobic, growing Escherichia coli metabolism using an online nuclear magnetic resonance spectroscopy system. Biotechnol. Bioeng. 42 (1993) 215-221
    • (1993) Biotechnol. Bioeng. , vol.42 , pp. 215-221
    • Chen, R.Z.1    Bailey, J.E.2
  • 11
  • 12
    • 0000943064 scopus 로고
    • Continuous-flow NMR bioreactor for invivo studies of microbial cell suspensions with low biomass concentrations
    • Degraaf A.A., Wittig R.M., Probst U., Strohhaecker J., Schoberth S.M., and Sahm H. Continuous-flow NMR bioreactor for invivo studies of microbial cell suspensions with low biomass concentrations. J. Magn. Reson. 98 (1992) 654-659
    • (1992) J. Magn. Reson. , vol.98 , pp. 654-659
    • Degraaf, A.A.1    Wittig, R.M.2    Probst, U.3    Strohhaecker, J.4    Schoberth, S.M.5    Sahm, H.6
  • 13
    • 9444269228 scopus 로고    scopus 로고
    • Development and application of a membrane cyclone reactor for in vivo NMR spectroscopy with high microbial cell densities
    • Hartbrich A., Schmitz G., WeusterBotz D., deGraaf A.A., and Wandrey C. Development and application of a membrane cyclone reactor for in vivo NMR spectroscopy with high microbial cell densities. Biotechnol. Bioeng. 51 (1996) 624-635
    • (1996) Biotechnol. Bioeng. , vol.51 , pp. 624-635
    • Hartbrich, A.1    Schmitz, G.2    WeusterBotz, D.3    deGraaf, A.A.4    Wandrey, C.5
  • 15
    • 0030088498 scopus 로고    scopus 로고
    • Influence of aeration on cytoplasmic pH of yeast in an NMR airlift bioreactor
    • Melvin B.K., and Shanks J.V. Influence of aeration on cytoplasmic pH of yeast in an NMR airlift bioreactor. Biotechnol. Prog. 12 (1996) 257-265
    • (1996) Biotechnol. Prog. , vol.12 , pp. 257-265
    • Melvin, B.K.1    Shanks, J.V.2
  • 16
    • 0029687542 scopus 로고    scopus 로고
    • Reaction engineering methods to study intracellular metabolite concentrations
    • Weuster-Botz D., and de Graaf A. Reaction engineering methods to study intracellular metabolite concentrations. Adv. Biochem. Eng. Biotechnol. 54 (1996) 75-108
    • (1996) Adv. Biochem. Eng. Biotechnol. , vol.54 , pp. 75-108
    • Weuster-Botz, D.1    de Graaf, A.2
  • 18
    • 0343673681 scopus 로고
    • A Continuous-flow culture apparatus: The cyclone column unit
    • Dawson P.S.S. A Continuous-flow culture apparatus: The cyclone column unit. Can. J. Microbiol. 9 (1963) 671-687
    • (1963) Can. J. Microbiol. , vol.9 , pp. 671-687
    • Dawson, P.S.S.1
  • 19
    • 0001167861 scopus 로고
    • Nuclear resonance in flowing liquids
    • Suryan G. Nuclear resonance in flowing liquids. Proc. Indian Acad. Sci. A33 (1951) 107-111
    • (1951) Proc. Indian Acad. Sci. , vol.A33 , pp. 107-111
    • Suryan, G.1
  • 20
    • 0027840016 scopus 로고
    • Understand cyclone design
    • Coker A.K. Understand cyclone design. Chem. Eng. Prog. 89 (1993) 51-55
    • (1993) Chem. Eng. Prog. , vol.89 , pp. 51-55
    • Coker, A.K.1
  • 21
    • 0036672179 scopus 로고    scopus 로고
    • Modeling classification in small-diameter hydrocyclones under variable rheological conditions
    • Tavares L.M., Souza L.L.G., Lima J.R.B., and Possa M.V. Modeling classification in small-diameter hydrocyclones under variable rheological conditions. Miner. Eng. 15 (2002) 613-622
    • (2002) Miner. Eng. , vol.15 , pp. 613-622
    • Tavares, L.M.1    Souza, L.L.G.2    Lima, J.R.B.3    Possa, M.V.4
  • 25
    • 0028387353 scopus 로고
    • Production of poly-beta-hydroxybutyrate in a cyclone bioreactor
    • Sheppard J.D., Marchessault P., and Whalen T. Production of poly-beta-hydroxybutyrate in a cyclone bioreactor. Trans. ASAE 37 (1994) 521-526
    • (1994) Trans. ASAE , vol.37 , pp. 521-526
    • Sheppard, J.D.1    Marchessault, P.2    Whalen, T.3
  • 26
    • 0032922829 scopus 로고    scopus 로고
    • High-cell-density cultivation of microorganisms
    • Riesenberg D., and Guthke R. High-cell-density cultivation of microorganisms. Appl. Microbiol. Biotechnol. 51 (1999) 422-430
    • (1999) Appl. Microbiol. Biotechnol. , vol.51 , pp. 422-430
    • Riesenberg, D.1    Guthke, R.2
  • 27
    • 0032987442 scopus 로고    scopus 로고
    • In vivo fluxes in the ammonium-assimilatory pathways in Corynebacterium glutaunicum studied by N-15 nuclear magnetic resonance
    • Tesch M., de Graaf A.A., and Sahm H. In vivo fluxes in the ammonium-assimilatory pathways in Corynebacterium glutaunicum studied by N-15 nuclear magnetic resonance. Appl. Environ. Microbiol. 65 (1999) 1099-1109
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 1099-1109
    • Tesch, M.1    de Graaf, A.A.2    Sahm, H.3
  • 28
    • 0033624811 scopus 로고    scopus 로고
    • Dynamic in vivo P-31 nuclear magnetic resonance study of Saccharomyces cerevisiae in glucose-limited chemostat culture during the aerobic-anaerobic shift
    • Gonzalez B., de Graaf A., Renaud M., and Sahm H. Dynamic in vivo P-31 nuclear magnetic resonance study of Saccharomyces cerevisiae in glucose-limited chemostat culture during the aerobic-anaerobic shift. Yeast 16 (2000) 483-497
    • (2000) Yeast , vol.16 , pp. 483-497
    • Gonzalez, B.1    de Graaf, A.2    Renaud, M.3    Sahm, H.4
  • 29
    • 0033916430 scopus 로고    scopus 로고
    • Energetics of syntrophic propionate oxidation in defined batch and chemostat cocultures
    • Scholten J.C.M., and Conrad R. Energetics of syntrophic propionate oxidation in defined batch and chemostat cocultures. Appl. Environ. Microbiol. 66 (2000) 2934-2942
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2934-2942
    • Scholten, J.C.M.1    Conrad, R.2
  • 30
    • 0027200329 scopus 로고
    • Automatic, localized invivo adjustment of all 1st-order and 2nd-order shim coils
    • Gruetter R. Automatic, localized invivo adjustment of all 1st-order and 2nd-order shim coils. Magn. Reson. Med. 29 (1993) 804-811
    • (1993) Magn. Reson. Med. , vol.29 , pp. 804-811
    • Gruetter, R.1
  • 31
    • 0001909564 scopus 로고    scopus 로고
    • Improved WATERGATE pulse sequences for solvent suppression in NMR spectroscopy
    • Liu M.L., Mao X.A., Ye C.H., Huang H., Nicholson J.K., and Lindon J.C. Improved WATERGATE pulse sequences for solvent suppression in NMR spectroscopy. J. Magn. Reson. 132 (1998) 125-129
    • (1998) J. Magn. Reson. , vol.132 , pp. 125-129
    • Liu, M.L.1    Mao, X.A.2    Ye, C.H.3    Huang, H.4    Nicholson, J.K.5    Lindon, J.C.6
  • 32
    • 36849111386 scopus 로고
    • Proton resonance shift of water in gas and liquid states
    • Hindman J.C. Proton resonance shift of water in gas and liquid states. J. Chem. Phys. 44 (1966) 4582-4592
    • (1966) J. Chem. Phys. , vol.44 , pp. 4582-4592
    • Hindman, J.C.1
  • 33
    • 0032321826 scopus 로고    scopus 로고
    • Eubacterium aggregans sp nov., a new homoacetogenic bacterium from olive mill wastewater treatment digestor
    • Mechichi T., Labat M., Woo T.H.S., Thomas P., Garcia J.L., and Patel B.K.C. Eubacterium aggregans sp nov., a new homoacetogenic bacterium from olive mill wastewater treatment digestor. Anaerobe 4 (1998) 283-291
    • (1998) Anaerobe , vol.4 , pp. 283-291
    • Mechichi, T.1    Labat, M.2    Woo, T.H.S.3    Thomas, P.4    Garcia, J.L.5    Patel, B.K.C.6
  • 34
    • 0027112229 scopus 로고
    • In search of a thermodynamic description of biomass yields for the chemotrophic growth of microorganisms
    • Heijnen J.J., and Vandijken J.P. In search of a thermodynamic description of biomass yields for the chemotrophic growth of microorganisms. Biotechnol. Bioeng. 39 (1992) 833-858
    • (1992) Biotechnol. Bioeng. , vol.39 , pp. 833-858
    • Heijnen, J.J.1    Vandijken, J.P.2
  • 35
    • 0026715777 scopus 로고
    • A method for the determination of changes of glycolytic metabolites in yeast on a subsecond time scale using extraction at neutral pH
    • Dekoning W., and Vandam K. A method for the determination of changes of glycolytic metabolites in yeast on a subsecond time scale using extraction at neutral pH. Anal. Biochem. 204 (1992) 118-123
    • (1992) Anal. Biochem. , vol.204 , pp. 118-123
    • Dekoning, W.1    Vandam, K.2
  • 36
    • 0343471961 scopus 로고    scopus 로고
    • In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae. 1. Experimental observations
    • Theobald U., Mailinger W., Baltes M., Rizzi M., and Reuss M. In vivo analysis of metabolic dynamics in Saccharomyces cerevisiae. 1. Experimental observations. Biotechnol. Bioeng. 55 (1997) 305-316
    • (1997) Biotechnol. Bioeng. , vol.55 , pp. 305-316
    • Theobald, U.1    Mailinger, W.2    Baltes, M.3    Rizzi, M.4    Reuss, M.5
  • 37
    • 33747169864 scopus 로고    scopus 로고
    • Control of ribosome turnover during growth of the haloalkaliphilic archaeon Natronococcus occultus
    • Nercessian D., and Conde R.D. Control of ribosome turnover during growth of the haloalkaliphilic archaeon Natronococcus occultus. Res. Microbiol. 157 (2006) 625-628
    • (2006) Res. Microbiol. , vol.157 , pp. 625-628
    • Nercessian, D.1    Conde, R.D.2
  • 39
    • 0037146827 scopus 로고    scopus 로고
    • New bioreactor-coupled rapid stopped-flow sampling technique for measurements of metabolite dynamics on a subsecond time scale
    • Buziol S., Bashir I., Baumeister A., Claa?en W., Noisommit-Rizzi N., Mailinger W., and Reuss M. New bioreactor-coupled rapid stopped-flow sampling technique for measurements of metabolite dynamics on a subsecond time scale. Biotechnol. Bioeng. 80 (2002) 632-636
    • (2002) Biotechnol. Bioeng. , vol.80 , pp. 632-636
    • Buziol, S.1    Bashir, I.2    Baumeister, A.3    Claassen, W.4    Noisommit-Rizzi, N.5    Mailinger, W.6    Reuss, M.7
  • 40
    • 33750070372 scopus 로고    scopus 로고
    • Integrated sampling procedure for metabolome analysis
    • Schaub J., Schiesling C., Reuss M., and Dauner M. Integrated sampling procedure for metabolome analysis. Biotechnol. Prog. 22 (2006) 1434-1442
    • (2006) Biotechnol. Prog. , vol.22 , pp. 1434-1442
    • Schaub, J.1    Schiesling, C.2    Reuss, M.3    Dauner, M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.