메뉴 건너뛰기




Volumn 59, Issue 2, 2008, Pages 297-301

One-step affinity purification of recombinant TATA binding proteins utilizing a modular protein interaction partner

Author keywords

Promoter; TAF1; TAND2; TBP; TBP associated factor; Transcription factor; Transcriptional activation domain; VP16

Indexed keywords

ARABIDOPSIS PROTEIN; FUNGAL PROTEIN; GLUTATHIONE TRANSFERASE; HYBRID PROTEIN; RECOMBINANT PROTEIN; TATA BINDING PROTEIN; TATA BINDING PROTEIN ASSOCIATED FACTOR; TRANSACTIVATOR PROTEIN;

EID: 42749091592     PISSN: 10465928     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pep.2008.02.011     Document Type: Article
Times cited : (3)

References (32)
  • 1
    • 0026741634 scopus 로고
    • The TATA-binding protein is required for transcription by all three nuclear RNA polymerases in yeast cells
    • Cormack B.P., and Struhl K. The TATA-binding protein is required for transcription by all three nuclear RNA polymerases in yeast cells. Cell 69 (1992) 685-696
    • (1992) Cell , vol.69 , pp. 685-696
    • Cormack, B.P.1    Struhl, K.2
  • 2
    • 0043269205 scopus 로고    scopus 로고
    • The RNA polymerase II core promoter
    • Smale S.T., and Kadonaga J.T. The RNA polymerase II core promoter. Annu. Rev. Biochem. 72 (2003) 449-479
    • (2003) Annu. Rev. Biochem. , vol.72 , pp. 449-479
    • Smale, S.T.1    Kadonaga, J.T.2
  • 3
    • 2542428546 scopus 로고    scopus 로고
    • Structure and mechanism of the RNA polymerase II transcription machinery
    • Hahn S. Structure and mechanism of the RNA polymerase II transcription machinery. Nat. Struct. Mol. Biol. 11 (2004) 394-403
    • (2004) Nat. Struct. Mol. Biol. , vol.11 , pp. 394-403
    • Hahn, S.1
  • 5
    • 0027250617 scopus 로고
    • Crystal structure of yeast TATA-binding protein and model for interaction with DNA
    • Chasman D.I., Flaherty K.M., Sharp P.A., and Kornberg R.D. Crystal structure of yeast TATA-binding protein and model for interaction with DNA. Proc. Natl. Acad. Sci. USA 90 (1993) 8174-8178
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 8174-8178
    • Chasman, D.I.1    Flaherty, K.M.2    Sharp, P.A.3    Kornberg, R.D.4
  • 6
    • 0041825432 scopus 로고    scopus 로고
    • Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes
    • Bleichenbacher M., Tan S., and Richmond T.J. Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes. J. Mol. Biol. 332 (2003) 783-793
    • (2003) J. Mol. Biol. , vol.332 , pp. 783-793
    • Bleichenbacher, M.1    Tan, S.2    Richmond, T.J.3
  • 7
    • 0027672685 scopus 로고
    • Purification of an active TATA-binding protein-containing factor using a monoclonal antibody that recognizes the human TATA-binding protein
    • Chatterjee P.K., Pruzan R., and Flint S.J. Purification of an active TATA-binding protein-containing factor using a monoclonal antibody that recognizes the human TATA-binding protein. Protein Expr. Purif. 4 (1993) 445-455
    • (1993) Protein Expr. Purif. , vol.4 , pp. 445-455
    • Chatterjee, P.K.1    Pruzan, R.2    Flint, S.J.3
  • 8
    • 3142533361 scopus 로고    scopus 로고
    • Antigen-binding properties of monoclonal antibodies reactive with human TATA-binding protein and use in immunoaffinity chromatography
    • Thompson N.E., Foley K.M., and Burgess R.R. Antigen-binding properties of monoclonal antibodies reactive with human TATA-binding protein and use in immunoaffinity chromatography. Protein Expr. Purif. 36 (2004) 186-197
    • (2004) Protein Expr. Purif. , vol.36 , pp. 186-197
    • Thompson, N.E.1    Foley, K.M.2    Burgess, R.R.3
  • 9
    • 0027566636 scopus 로고
    • Expression and purification of general transcription factors by FLAG epitope-tagging and peptide elution
    • Chiang C.M., and Roeder R.G. Expression and purification of general transcription factors by FLAG epitope-tagging and peptide elution. Pept. Res. 6 (1993) 62-64
    • (1993) Pept. Res. , vol.6 , pp. 62-64
    • Chiang, C.M.1    Roeder, R.G.2
  • 10
    • 0028223755 scopus 로고
    • Multimerization of the mouse TATA-binding protein (TBP) driven by its C-terminal conserved domain
    • Kato K., Makino Y., Kishimoto T., Yamauchi J., Kato S., Muramatsu M., and Tamura T. Multimerization of the mouse TATA-binding protein (TBP) driven by its C-terminal conserved domain. Nucleic Acids Res. 22 (1994) 1179-1185
    • (1994) Nucleic Acids Res. , vol.22 , pp. 1179-1185
    • Kato, K.1    Makino, Y.2    Kishimoto, T.3    Yamauchi, J.4    Kato, S.5    Muramatsu, M.6    Tamura, T.7
  • 11
    • 0029843541 scopus 로고    scopus 로고
    • Activator-dependent transcription by mammalian RNA polymerase II: in vitro reconstitution with general transcription factors and cofactors
    • Ge H., Martinez E., Chiang C.M., and Roeder R.G. Activator-dependent transcription by mammalian RNA polymerase II: in vitro reconstitution with general transcription factors and cofactors. Methods Enzymol. 274 (1996) 57-71
    • (1996) Methods Enzymol. , vol.274 , pp. 57-71
    • Ge, H.1    Martinez, E.2    Chiang, C.M.3    Roeder, R.G.4
  • 12
    • 0029806764 scopus 로고    scopus 로고
    • Purification of human RNA polymerase II and general transcription factors
    • Maldonado E., Drapkin R., and Reinberg D. Purification of human RNA polymerase II and general transcription factors. Methods Enzymol. 274 (1996) 72-100
    • (1996) Methods Enzymol. , vol.274 , pp. 72-100
    • Maldonado, E.1    Drapkin, R.2    Reinberg, D.3
  • 15
    • 0037405079 scopus 로고    scopus 로고
    • Structural and functional analysis of mutations along the crystallographic dimer interface of the yeast TATA binding protein
    • Kou H., Irvin J.D., Huisinga K.L., Mitra M., and Pugh B.F. Structural and functional analysis of mutations along the crystallographic dimer interface of the yeast TATA binding protein. Mol. Cell Biol. 23 (2003) 3186-3201
    • (2003) Mol. Cell Biol. , vol.23 , pp. 3186-3201
    • Kou, H.1    Irvin, J.D.2    Huisinga, K.L.3    Mitra, M.4    Pugh, B.F.5
  • 17
    • 0034602843 scopus 로고    scopus 로고
    • Structural basis of preinitiation complex assembly on human Pol II promoters
    • Tsai F.T.F., and Sigler P.B. Structural basis of preinitiation complex assembly on human Pol II promoters. EMBO J. 19 (2000) 25-36
    • (2000) EMBO J. , vol.19 , pp. 25-36
    • Tsai, F.T.F.1    Sigler, P.B.2
  • 18
    • 0027402497 scopus 로고
    • Pattern of aromatic and hydrophobic amino acids critical for one of two subdomains of the VP16 transcriptional activator
    • Regier J.L., Shen F., and Triezenberg S.J. Pattern of aromatic and hydrophobic amino acids critical for one of two subdomains of the VP16 transcriptional activator. Proc. Natl. Acad. Sci. USA 90 (1993) 883-887
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 883-887
    • Regier, J.L.1    Shen, F.2    Triezenberg, S.J.3
  • 19
    • 0023697252 scopus 로고
    • GAL4-VP16 is an unusually potent transcriptional activator
    • Sadowski I., Ma J., Triezenberg S., and Ptashne M. GAL4-VP16 is an unusually potent transcriptional activator. Nature 335 (1988) 563-564
    • (1988) Nature , vol.335 , pp. 563-564
    • Sadowski, I.1    Ma, J.2    Triezenberg, S.3    Ptashne, M.4
  • 20
    • 1842635751 scopus 로고    scopus 로고
    • Quantitative assessment of in vitro interactions implicates TATA-binding protein as a target of the VP16C transcriptional activation region
    • Nedialkov Y.A., and Triezenberg S.J. Quantitative assessment of in vitro interactions implicates TATA-binding protein as a target of the VP16C transcriptional activation region. Arch. Biochem. Biophys. 425 (2004) 77-86
    • (2004) Arch. Biochem. Biophys. , vol.425 , pp. 77-86
    • Nedialkov, Y.A.1    Triezenberg, S.J.2
  • 21
    • 0033963045 scopus 로고    scopus 로고
    • TFIIA-TAF regulatory interplay: NMR evidence for overlapping binding sites on TBP
    • Bagby S., Mal T.K., Liu D., Raddatz E., Nakatani Y., and Ikura M. TFIIA-TAF regulatory interplay: NMR evidence for overlapping binding sites on TBP. FEBS Lett. 468 (2000) 149-154
    • (2000) FEBS Lett. , vol.468 , pp. 149-154
    • Bagby, S.1    Mal, T.K.2    Liu, D.3    Raddatz, E.4    Nakatani, Y.5    Ikura, M.6
  • 22
    • 0031883573 scopus 로고    scopus 로고
    • The yeast TAF145 inhibitory domain and TFIIA competitively bind to TATA-binding protein
    • Kokubo T., Swanson M.J., Nishikawa J.I., Hinnebusch A.G., and Nakatani Y. The yeast TAF145 inhibitory domain and TFIIA competitively bind to TATA-binding protein. Mol. Cell Biol. 18 (1998) 1003-1012
    • (1998) Mol. Cell Biol. , vol.18 , pp. 1003-1012
    • Kokubo, T.1    Swanson, M.J.2    Nishikawa, J.I.3    Hinnebusch, A.G.4    Nakatani, Y.5
  • 23
    • 2542464899 scopus 로고    scopus 로고
    • Structural and functional characterization on the interaction of yeast TFIID subunit TAF1 with TATA-binding protein
    • Mal T.K., Masutomi Y., Zheng L., Nakata Y., Ohta H., Nakatani Y., Kokubo T., and Ikura M. Structural and functional characterization on the interaction of yeast TFIID subunit TAF1 with TATA-binding protein. J. Mol. Biol. 339 (2004) 681-693
    • (2004) J. Mol. Biol. , vol.339 , pp. 681-693
    • Mal, T.K.1    Masutomi, Y.2    Zheng, L.3    Nakata, Y.4    Ohta, H.5    Nakatani, Y.6    Kokubo, T.7    Ikura, M.8
  • 24
    • 0034691184 scopus 로고    scopus 로고
    • A role of transcriptional activators as antirepressors for the autoinhibitory activity of TATA box binding of transcription factor IID
    • Kotani T., Banno K., Ikura M., Hinnebusch A.G., Nakatani Y., Kawaichi M., and Kokubo T. A role of transcriptional activators as antirepressors for the autoinhibitory activity of TATA box binding of transcription factor IID. Proc. Natl. Acad. Sci. USA 97 (2000) 7178-7183
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 7178-7183
    • Kotani, T.1    Banno, K.2    Ikura, M.3    Hinnebusch, A.G.4    Nakatani, Y.5    Kawaichi, M.6    Kokubo, T.7
  • 25
    • 0348011822 scopus 로고    scopus 로고
    • Purification and protein interaction assays of the VP16C transcription activation domain
    • Nedialkov Y.A., Shooltz D.D., and Triezenberg S.J. Purification and protein interaction assays of the VP16C transcription activation domain. Methods Enzymol. 370 (2003) 522-535
    • (2003) Methods Enzymol. , vol.370 , pp. 522-535
    • Nedialkov, Y.A.1    Shooltz, D.D.2    Triezenberg, S.J.3
  • 26
    • 0026711087 scopus 로고
    • Biochemical and genetic characterization of a yeast TFIID mutant that alters transcription in vivo and DNA binding in vitro
    • Arndt K.M., Ricupero S.L., Eisenmann D.M., and Winston F. Biochemical and genetic characterization of a yeast TFIID mutant that alters transcription in vivo and DNA binding in vitro. Mol. Cell Biol. 12 (1992) 2372-2382
    • (1992) Mol. Cell Biol. , vol.12 , pp. 2372-2382
    • Arndt, K.M.1    Ricupero, S.L.2    Eisenmann, D.M.3    Winston, F.4
  • 28
    • 0021100690 scopus 로고
    • Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei
    • Dignam J.D., Lebovitz R.M., and Roeder R.G. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 11 (1983) 1475-1489
    • (1983) Nucleic Acids Res. , vol.11 , pp. 1475-1489
    • Dignam, J.D.1    Lebovitz, R.M.2    Roeder, R.G.3
  • 29
    • 0027275111 scopus 로고
    • RAP30/74 (transcription factor IIF) is required for promoter escape by RNA polymerase II
    • Chang C., Kostrub C.F., and Burton Z.F. RAP30/74 (transcription factor IIF) is required for promoter escape by RNA polymerase II. J. Biol. Chem. 268 (1993) 20482-20489
    • (1993) J. Biol. Chem. , vol.268 , pp. 20482-20489
    • Chang, C.1    Kostrub, C.F.2    Burton, Z.F.3
  • 30
    • 0027146573 scopus 로고
    • Altered promoter binding of the TATA box-binding factor induced by the transcriptional activation domain of VP16 and suppressed by TFIIA
    • Liljelund P., Ingles C.J., and Greenblatt J. Altered promoter binding of the TATA box-binding factor induced by the transcriptional activation domain of VP16 and suppressed by TFIIA. Mol. Gen. Genet. 241 (1993) 694-699
    • (1993) Mol. Gen. Genet. , vol.241 , pp. 694-699
    • Liljelund, P.1    Ingles, C.J.2    Greenblatt, J.3
  • 32
    • 0037087628 scopus 로고    scopus 로고
    • A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription
    • Tora L. A unified nomenclature for TATA box binding protein (TBP)-associated factors (TAFs) involved in RNA polymerase II transcription. Genes Dev. 16 (2002) 673-675
    • (2002) Genes Dev. , vol.16 , pp. 673-675
    • Tora, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.