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Volumn 86, Issue 3, 2008, Pages 240-247

Genetic diversity of Frankia strains in root nodules from Hippophaë rhamnoides L.

Author keywords

Frankia; Genetic diversity; Hippopha rhamnoides L.; nifD nifK intergenic spacer

Indexed keywords

GENETIC ENGINEERING; POLYMORPHISM; PRECIPITATION (CHEMICAL);

EID: 42449147373     PISSN: 19162804     EISSN: None     Source Type: Journal    
DOI: 10.1139/B07-133     Document Type: Article
Times cited : (2)

References (25)
  • 1
    • 0027191394 scopus 로고
    • Biology of Frankia strains, actinomycete symbionts of actinorhizal plants
    • PMID:8336669
    • Benson, D.R., and Silvester, W.B. 1993. Biology of Frankia strains, actinomycete symbionts of actinorhizal plants. Microbiol. Rev. 57: 293-319. PMID:8336669.
    • (1993) Microbiol. Rev , vol.57 , pp. 293-319
    • Benson, D.R.1    Silvester, W.B.2
  • 2
    • 0033494753 scopus 로고    scopus 로고
    • Dominance of Frankia strains of Alnus incana subsp. rugosa and Myrica pensylvanica
    • doi:10.1139/cjb-77-9-1203
    • Clawson, M.L., Gawronski, J., and Benson, D.R. 1999. Dominance of Frankia strains of Alnus incana subsp. rugosa and Myrica pensylvanica. Can. J. Bot. 77: 1203-1207. doi:10.1139/cjb-77-9-1203.
    • (1999) Can. J. Bot , vol.77 , pp. 1203-1207
    • Clawson, M.L.1    Gawronski, J.2    Benson, D.R.3
  • 3
    • 14644438618 scopus 로고    scopus 로고
    • Characterization of genetic diversity of Frankia strains in nodules of Alnus nepalensis (D. Don) from the Hengduan Mountains on the basis of PCR-RFLP analysis of the nifD-nifK IGS
    • doi:10.1007/s11104-005-5028-8
    • Dai, Y.M., He, X.Y., Zhang, C.G., and Zhang, Z.Z. 2004. Characterization of genetic diversity of Frankia strains in nodules of Alnus nepalensis (D. Don) from the Hengduan Mountains on the basis of PCR-RFLP analysis of the nifD-nifK IGS. Plant Soil, 267: 207-212. doi:10.1007/s11104-005-5028-8.
    • (2004) Plant Soil , vol.267 , pp. 207-212
    • Dai, Y.M.1    He, X.Y.2    Zhang, C.G.3    Zhang, Z.Z.4
  • 4
    • 42449163594 scopus 로고    scopus 로고
    • Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle, Wash
    • Felsenstein, J. 1993. PHYLIP (Phylogeny Inference Package) version 3.5c. Distributed by the author. Department of Genetics, University of Washington, Seattle, Wash.
  • 5
    • 0033006588 scopus 로고    scopus 로고
    • Assessing Frankia populations in plants and soil using molecular methods
    • doi:10.1111/j.1574-6941.1999.tb00613.x
    • Hahn, D., Nickel, A., and Dawson, J. 1999. Assessing Frankia populations in plants and soil using molecular methods. FEMS Microbiol. Ecol. 29: 215-227. doi:10.1111/j.1574-6941.1999.tb00613.x.
    • (1999) FEMS Microbiol. Ecol , vol.29 , pp. 215-227
    • Hahn, D.1    Nickel, A.2    Dawson, J.3
  • 6
    • 4344704150 scopus 로고    scopus 로고
    • Natural diversity of nodular microsymbionts of Myrica rubra
    • doi:10.1023/B:PLSO.0000037045.42440.1d
    • He, X.H., Chen, L.G., Hu, X.Q., and Asghar, S. 2004. Natural diversity of nodular microsymbionts of Myrica rubra. Plant Soil, 262: 229-239. doi:10.1023/B:PLSO.0000037045.42440.1d.
    • (2004) Plant Soil , vol.262 , pp. 229-239
    • He, X.H.1    Chen, L.G.2    Hu, X.Q.3    Asghar, S.4
  • 7
    • 0035350691 scopus 로고    scopus 로고
    • Diversity and specificity of Frankia strains in nodules of sympatric Myrica gale, Alnus incana, and Shepherdia canadensis determined by rrs gene polymorphism
    • PMID:11319089, doi:10.1128/AEM.67.5.2116-2122.2001
    • Huguet, V., McCray-Batzli, J., Zimpfer, J.F., Normand, P., Dawson, J.O., and Fernandez, M.P. 2001. Diversity and specificity of Frankia strains in nodules of sympatric Myrica gale, Alnus incana, and Shepherdia canadensis determined by rrs gene polymorphism. Appl. Environ. Microbiol. 67: 2116-2122. doi:10.1128/AEM.67.5.2116-2122.2001. PMID:11319089.
    • (2001) Appl. Environ. Microbiol , vol.67 , pp. 2116-2122
    • Huguet, V.1    McCray-Batzli, J.2    Zimpfer, J.F.3    Normand, P.4    Dawson, J.O.5    Fernandez, M.P.6
  • 8
    • 0033258297 scopus 로고    scopus 로고
    • Molecular phylogenies of plants and Frankia support multiple origins of actinorhizal symbioses
    • PMID:10620407, doi:10.1006/mpev.1999.0692
    • Jeong, S.C., Ritchie, N.J., and Myrold, D.D. 1999. Molecular phylogenies of plants and Frankia support multiple origins of actinorhizal symbioses. Mol. Phylogenet. Evol. 13: 493-503. doi:10.1006/mpev.1999.0692. PMID:10620407.
    • (1999) Mol. Phylogenet. Evol , vol.13 , pp. 493-503
    • Jeong, S.C.1    Ritchie, N.J.2    Myrold, D.D.3
  • 9
    • 0033495438 scopus 로고    scopus 로고
    • Polymerase chain reaction-restriction fragment size polymorphisms for assessing and increasing biodiversity of Frankia culture collections
    • doi:10.1139/cjb-77-9-1261
    • Lumini, E., and Bosco, M. 1999. Polymerase chain reaction-restriction fragment size polymorphisms for assessing and increasing biodiversity of Frankia culture collections. Can. J. Bot. 77: 1261-1269. doi:10.1139/cjb-77-9-1261.
    • (1999) Can. J. Bot , vol.77 , pp. 1261-1269
    • Lumini, E.1    Bosco, M.2
  • 10
    • 0030458988 scopus 로고    scopus 로고
    • PCR-RFLP and total DNA homology revealed three related genomic species among a broad host-range Frankia strains
    • doi:10.1111/j.1574-6941.1996.tb00127.x
    • Lumini, E., Bosco, M., and Fernandez, M.P. 1996. PCR-RFLP and total DNA homology revealed three related genomic species among a broad host-range Frankia strains. FEMS Microbiol. Ecol. 21: 303-311. doi:10.1111/j.1574-6941.1996.tb00127.x.
    • (1996) FEMS Microbiol. Ecol , vol.21 , pp. 303-311
    • Lumini, E.1    Bosco, M.2    Fernandez, M.P.3
  • 11
    • 0029347131 scopus 로고
    • Molecular structure of the Frankia spp. nifD-K intergenic spacer and design of Frankia genus compatible primer
    • PMID:8574444
    • Nalin, R., Domenach, A.-M., and Normand, P. 1995. Molecular structure of the Frankia spp. nifD-K intergenic spacer and design of Frankia genus compatible primer. Mol. Ecol. 4: 483-491. PMID:8574444.
    • (1995) Mol. Ecol , vol.4 , pp. 483-491
    • Nalin, R.1    Domenach, A.-M.2    Normand, P.3
  • 12
    • 0030904910 scopus 로고    scopus 로고
    • 2-fixing activity of Frankia strains in relation to soil depth
    • doi:10.1111/j.1399-3054.1997.tb05378. x
    • 2-fixing activity of Frankia strains in relation to soil depth. Physiol. Plant. 99: 732-738. doi:10.1111/j.1399-3054.1997.tb05378. x.
    • (1997) Physiol. Plant , vol.99 , pp. 732-738
    • Nalin, R.1    Normand, P.2    Domenach, A.-M.3
  • 13
    • 0033503628 scopus 로고    scopus 로고
    • Polymerase chain reaction and hybridization on DNA extracted from soil as a tool for Frankia spp. population distribution studies in soil
    • doi:10.1139/cjb-77-9-1239
    • Nalin, R., Normand, P., Simonet, P., and Domenach, A.-M. 1999. Polymerase chain reaction and hybridization on DNA extracted from soil as a tool for Frankia spp. population distribution studies in soil. Can. J. Bot. 77: 1239-1247. doi:10.1139/cjb-77-9-1239.
    • (1999) Can. J. Bot , vol.77 , pp. 1239-1247
    • Nalin, R.1    Normand, P.2    Simonet, P.3    Domenach, A.-M.4
  • 14
    • 0030907368 scopus 로고    scopus 로고
    • The nodular microsymbionts of Gymnostoma spp. are Elaeagnus-infective strains
    • PMID:9097456
    • Navarro, E., Nalin, R., Gauthier, D., and Normand, P. 1997. The nodular microsymbionts of Gymnostoma spp. are Elaeagnus-infective strains. Appl. Environ. Microbiol. 63: 1610-1616. PMID:9097456.
    • (1997) Appl. Environ. Microbiol , vol.63 , pp. 1610-1616
    • Navarro, E.1    Nalin, R.2    Gauthier, D.3    Normand, P.4
  • 15
    • 0033451417 scopus 로고    scopus 로고
    • Distribution of Gymnostoma spp. microsymbiotic Frankia strains in New Caledonia is related to soil type and to host-plant species
    • PMID:10620222, doi:10.1046/j.1365- 294x.1999.00742.x
    • Navarro, E., Jaffre, T., Gauthier, D., Gourbiere, F., Rinaudo, G., Simonet, P., and Normand, P. 1999. Distribution of Gymnostoma spp. microsymbiotic Frankia strains in New Caledonia is related to soil type and to host-plant species. Mol. Ecol. 8: 1781-1788. doi:10.1046/j.1365- 294x.1999.00742.x. PMID:10620222.
    • (1999) Mol. Ecol , vol.8 , pp. 1781-1788
    • Navarro, E.1    Jaffre, T.2    Gauthier, D.3    Gourbiere, F.4    Rinaudo, G.5    Simonet, P.6    Normand, P.7
  • 16
    • 0024065404 scopus 로고
    • Conservation of nif sequences in Frankia
    • PMID:3185502, doi:10.1007/BF00339587
    • Normand, P., Simonet, P., and Bardin, R. 1988. Conservation of nif sequences in Frankia. Mol. Gen. Genet. 213: 238-246. doi:10.1007/BF00339587. PMID:3185502.
    • (1988) Mol. Gen. Genet , vol.213 , pp. 238-246
    • Normand, P.1    Simonet, P.2    Bardin, R.3
  • 17
    • 0030203863 scopus 로고    scopus 로고
    • TREEVIEW: An application to display phylogenetic trees on personal computers
    • PMID:8902363
    • Page, R.D.M. 1996. TREEVIEW: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12: 357-358. PMID:8902363.
    • (1996) Comput. Appl. Biosci , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 18
    • 0033494754 scopus 로고    scopus 로고
    • Phylogenetic placement of uncultured Ceanothus microsymbionts using 16S rRNA gene sequences
    • doi:10.1139/cjb-77-9-1208
    • Ritchie, N.J., and Myrold, D.D. 1999a. Phylogenetic placement of uncultured Ceanothus microsymbionts using 16S rRNA gene sequences. Can. J. Bot. 77: 1208-1213. doi:10.1139/cjb-77-9-1208.
    • (1999) Can. J. Bot , vol.77 , pp. 1208-1213
    • Ritchie, N.J.1    Myrold, D.D.2
  • 19
    • 0032958204 scopus 로고    scopus 로고
    • Geographic distribution and genetic diversity of Ceanothus-infective Frankia strains
    • PMID:10103225
    • Ritchie, N.J., and Myrold, D.D. 1999b. Geographic distribution and genetic diversity of Ceanothus-infective Frankia strains. Appl. Environ. Microbiol. 65: 1378-1383. PMID:10103225.
    • (1999) Appl. Environ. Microbiol , vol.65 , pp. 1378-1383
    • Ritchie, N.J.1    Myrold, D.D.2
  • 20
    • 0030043863 scopus 로고    scopus 로고
    • Genetic diversity among Frankia strains nodulating members of the Family Casuarinaceae in Australia revealed by PCR and restriction fragment length polymorphism analysis with crushed root nodules
    • PMID:8975625
    • Rouvier, C., Prin, Y., Reddell, P., Normand, P., and Simonet, P. 1996. Genetic diversity among Frankia strains nodulating members of the Family Casuarinaceae in Australia revealed by PCR and restriction fragment length polymorphism analysis with crushed root nodules. Appl. Environ. Microbiol. 62: 979-985. PMID:8975625.
    • (1996) Appl. Environ. Microbiol , vol.62 , pp. 979-985
    • Rouvier, C.1    Prin, Y.2    Reddell, P.3    Normand, P.4    Simonet, P.5
  • 22
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • PMID:7984417, doi:10.1093/nar/22.22.4673
    • Thompson, J.D., Higgins, D.G., and Gibson, T.J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680. doi:10.1093/nar/22.22.4673. PMID:7984417.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 23
    • 42449098678 scopus 로고    scopus 로고
    • Root system of Hippophae rhamnoides and its founction I-differentiation and division
    • in Chinese
    • Wang, L., Zhang, X.M., Lin, M.Zh., and Zhang, J.K. 2005. Root system of Hippophae rhamnoides and its founction I-differentiation and division. Hippophae. 18: 13-19 [in Chinese.]
    • (2005) Hippophae , vol.18 , pp. 13-19
    • Wang, L.1    Zhang, X.M.2    Lin, M.Z.3    Zhang, J.K.4
  • 24
    • 23144465882 scopus 로고    scopus 로고
    • Growth and physiological responses to drought and elevated ultraviolet-B in two contrasting populations of Hippophae rhamnoides
    • doi:10.1111/j.1399-3054.2005.00517.x
    • Yang, Y.Q., Yao, Y.A., Xu, G., and Lia, Ch.Y. 2005. Growth and physiological responses to drought and elevated ultraviolet-B in two contrasting populations of Hippophae rhamnoides. Physiol. Plant. 124: 431-440. doi:10.1111/j.1399-3054.2005.00517.x.
    • (2005) Physiol. Plant , vol.124 , pp. 431-440
    • Yang, Y.Q.1    Yao, Y.A.2    Xu, G.3    Lia, C.Y.4
  • 25
    • 42449138472 scopus 로고    scopus 로고
    • Yeh, F.C., Yang, R.C., and Boyle, T. POPGENE version 1.32. 1999. Microsoft window base software for population genetic analysis: a quick user's guide. University of Alberta, Center for International Forestry Research, Alta.
    • Yeh, F.C., Yang, R.C., and Boyle, T. POPGENE version 1.32. 1999. Microsoft window base software for population genetic analysis: a quick user's guide. University of Alberta, Center for International Forestry Research, Alta.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.