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Volumn 38, Issue 2, 2008, Pages 145-153

Channel glass-based detection of human short insertion/deletion polymorphisms by tandem hybridization

Author keywords

Arrayed probes; Channel glass; Detection; Indels; Tandem hybridization

Indexed keywords

DNA; GENES; GLASS; NUCLEIC ACIDS; OLIGONUCLEOTIDES; ORGANIC ACIDS; TECHNOLOGY;

EID: 42449094693     PISSN: 10736085     EISSN: None     Source Type: Journal    
DOI: 10.1007/s12033-007-9004-9     Document Type: Article
Times cited : (2)

References (41)
  • 1
    • 0031963203 scopus 로고    scopus 로고
    • DNA chips: State-of-the art
    • G. Ramsay 1998 DNA chips: State-of-the art Nature Biotechnology 16 40 44
    • (1998) Nature Biotechnology , vol.16 , pp. 40-44
    • Ramsay, G.1
  • 7
    • 0035895527 scopus 로고    scopus 로고
    • The human genome
    • E. Pennisi 2001 The human genome Science 291 1177 1180
    • (2001) Science , vol.291 , pp. 1177-1180
    • Pennisi, E.1
  • 9
    • 0026508384 scopus 로고
    • Identification of clusters of bialleic polymorphic sequence-tagged sites (pSTSs) that generate highly informative and automatable markers for genetic linkage mapping
    • D. A. Nickerson C. Whitehurst C. Boysen P. Charmley R. Kaiser L. Hood 1992 Identification of clusters of bialleic polymorphic sequence-tagged sites (pSTSs) that generate highly informative and automatable markers for genetic linkage mapping Genomics 12 377 387
    • (1992) Genomics , vol.12 , pp. 377-387
    • Nickerson, D.A.1    Whitehurst, C.2    Boysen, C.3    Charmley, P.4    Kaiser, R.5    Hood, L.6
  • 10
    • 0030869377 scopus 로고    scopus 로고
    • What is significant in whole-genome linkage disequilibrium studies?
    • L. Kruglyak 1997 What is significant in whole-genome linkage disequilibrium studies? American Journal of Human Genetics 61 810 812
    • (1997) American Journal of Human Genetics , vol.61 , pp. 810-812
    • Kruglyak, L.1
  • 12
    • 0025744705 scopus 로고
    • Mechanisms of insertional mutagenesis in human genes causing genetic disease
    • D. N. Cooper M. Krawczak 1991 Mechanisms of insertional mutagenesis in human genes causing genetic disease Human Genetics 87 409 415
    • (1991) Human Genetics , vol.87 , pp. 409-415
    • Cooper, D.N.1    Krawczak, M.2
  • 13
    • 0028618275 scopus 로고
    • Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports
    • Z. Guo R. A. Guifoyle A. J. Thiel R. Wang L. M. Smith 1994 Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports Nucleic Acids Research 22 327 333
    • (1994) Nucleic Acids Research , vol.22 , pp. 327-333
    • Guo, Z.1    Guifoyle, R.A.2    Thiel, A.J.3    Wang, R.4    Smith, L.M.5
  • 14
    • 0032524107 scopus 로고    scopus 로고
    • Immobilization of DNA in polyacrylamide gel for the manufacture of DNA and DNA oligonucleotide microchips
    • D. Proudnikov E. Timofeev A. Mirzabekov 1998 Immobilization of DNA in polyacrylamide gel for the manufacture of DNA and DNA oligonucleotide microchips Analytical Biochemistry 259 34 41
    • (1998) Analytical Biochemistry , vol.259 , pp. 34-41
    • Proudnikov, D.1    Timofeev, E.2    Mirzabekov, A.3
  • 15
    • 0035356575 scopus 로고    scopus 로고
    • Evaluation of three-dimensional microchannel glass biochips for multiplex nucleic acid fluorescence hybridization assays
    • V. Benoit A. Steel M. Torres Y.-Y. Yu H. Yang J. Cooper 2001 Evaluation of three-dimensional microchannel glass biochips for multiplex nucleic acid fluorescence hybridization assays Analytical Chemistry 73 2412 2420
    • (2001) Analytical Chemistry , vol.73 , pp. 2412-2420
    • Benoit, V.1    Steel, A.2    Torres, M.3    Yu, Y.-Y.4    Yang, H.5    Cooper, J.6
  • 17
    • 0035894306 scopus 로고    scopus 로고
    • Chemiluminescence detection for hyrbidization assays on the flow-thru chip, a three-dimensional microchannel biochip
    • J. Cheek A. B. Steel M. P. Torres Y.-Y. Yu H. Yang 2001 Chemiluminescence detection for hyrbidization assays on the flow-thru chip, a three-dimensional microchannel biochip Analytical Chemistry 73 5777 5783
    • (2001) Analytical Chemistry , vol.73 , pp. 5777-5783
    • Cheek, J.1    Steel, A.B.2    Torres, M.P.3    Yu, Y.-Y.4    Yang, H.5
  • 20
    • 0037410070 scopus 로고    scopus 로고
    • DNA probe attachment on plastic surfaces and microfluidic hybridization array channel devices with sample oscillation
    • Y. Liu C. B. Rauch 2003 DNA probe attachment on plastic surfaces and microfluidic hybridization array channel devices with sample oscillation Analytical Biochemistry 317 76 84
    • (2003) Analytical Biochemistry , vol.317 , pp. 76-84
    • Liu, Y.1    Rauch, C.B.2
  • 24
    • 11344249894 scopus 로고    scopus 로고
    • Flow-through-type DNA array based on ideally ordered anodic porous alumina substrate
    • Published Online: 17 December. doi: 10.1002/adma.200400360
    • Matsumoto, F., Nishio, K., & Masuda, H. (2004). Flow-through-type DNA array based on ideally ordered anodic porous alumina substrate. Advanced Materials Published Online: 17 December. doi: 10.1002/adma.200400360.
    • (2004) Advanced Materials
    • Matsumoto, F.1    Nishio, K.2    Masuda, H.3
  • 26
    • 0035228515 scopus 로고    scopus 로고
    • Analysis of nucleic acids by tandem hybridization on oligonucleotide microarrays
    • Humana Press Totowa, NJ
    • Maldonado, R., & Beattie, K. L. (2001). Analysis of nucleic acids by tandem hybridization on oligonucleotide microarrays. In J. B. Rampal (Ed.), DNA arrays. Methods and protocols (pp. 157-171). Totowa, NJ: Humana Press.
    • (2001) DNA Arrays. Methods and Protocols , pp. 157-171
    • Maldonado, R.1    Beattie, K.L.2    Rampal, J.B.3
  • 30
    • 0035053268 scopus 로고    scopus 로고
    • Modification of an automated liquid-handling system for reagent-jet, nanoliter-level dispensing
    • J. S. Hicks B. W. Harker K. L. Beattie M. J. Doktycz 2001 Modification of an automated liquid-handling system for reagent-jet, nanoliter-level dispensing Biotechniques 30 878 885
    • (2001) Biotechniques , vol.30 , pp. 878-885
    • Hicks, J.S.1    Harker, B.W.2    Beattie, K.L.3    Doktycz, M.J.4
  • 31
    • 0024582686 scopus 로고
    • Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction
    • J. L. Weber P. E. May 1989 Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction American Journal of Human Genetics 44 388 396
    • (1989) American Journal of Human Genetics , vol.44 , pp. 388-396
    • Weber, J.L.1    May, P.E.2
  • 32
    • 38949145793 scopus 로고    scopus 로고
    • A comparison of hybridization efficiency between flat glass and channel glass solid supports
    • doi: 10.1007/s12033-007-9001-z
    • Betanzos-Cabrera, G., Harker, B. W., Doktycz, M. J., Weber, J. L., & Beattie, K. L. (2007). A comparison of hybridization efficiency between flat glass and channel glass solid supports. Molecular Biotechnology. doi: 10.1007/s12033-007-9001-z.
    • (2007) Molecular Biotechnology
    • Betanzos-Cabrera, G.1    Harker, B.W.2    Doktycz, M.J.3    Weber, J.L.4    Beattie, K.L.5
  • 34
    • 0037236218 scopus 로고    scopus 로고
    • Techniques patents for SNP genotyping
    • R. M. Twyman S. B. Primrose 2003 Techniques patents for SNP genotyping Pharmacogenomics 4 67 79
    • (2003) Pharmacogenomics , vol.4 , pp. 67-79
    • Twyman, R.M.1    Primrose, S.B.2
  • 35
    • 0036929340 scopus 로고    scopus 로고
    • Accuracy of genotyping for single nucleotide polymorphisms by a microarray-based single nucleotide polymorphism typing method involving hybridization of short allele-specific oligonucleotides
    • H. Iwasaki Y. Ezura R. Ishida M. Kajita M. Kodaira J. Knight S. Daniel M. Shi M. Emi 2002 Accuracy of genotyping for single nucleotide polymorphisms by a microarray-based single nucleotide polymorphism typing method involving hybridization of short allele-specific oligonucleotides DNA Research 30 59 62
    • (2002) DNA Research , vol.30 , pp. 59-62
    • Iwasaki, H.1    Ezura, Y.2    Ishida, R.3    Kajita, M.4    Kodaira, M.5    Knight, J.6    Daniel, S.7    Shi, M.8    Emi, M.9
  • 36
    • 23944506835 scopus 로고    scopus 로고
    • SNP microarray analysis for genome-wide detection of crossover regions
    • M. Wirtenberger K. Hemminki B. Chen B. Burwinkel 2005 SNP microarray analysis for genome-wide detection of crossover regions Human Genetics 117 389 397
    • (2005) Human Genetics , vol.117 , pp. 389-397
    • Wirtenberger, M.1    Hemminki, K.2    Chen, B.3    Burwinkel, B.4
  • 37
    • 0032581024 scopus 로고    scopus 로고
    • Nearest-neighbor thermodynamics of internal A-C mismatches in DNA. Sequence dependence and pH effects
    • H. T. Allawi J. SantaLucia 1998 Nearest-neighbor thermodynamics of internal A-C mismatches in DNA. Sequence dependence and pH effects Biochemistry 37 9435 9444
    • (1998) Biochemistry , vol.37 , pp. 9435-9444
    • Allawi, H.T.1    Santalucia, J.2
  • 38
    • 0028933039 scopus 로고
    • Optical melting of 128 octamer DNA duplexes. Effects of base pair location and nearest neighbors on thermal stability
    • M. J. Doktycz M. D. Morris S. J Dormady K. L. Beattie K. B. Jacobson 1995 Optical melting of 128 octamer DNA duplexes. Effects of base pair location and nearest neighbors on thermal stability The Journal of Biological Chemistry 270 8439 8445
    • (1995) The Journal of Biological Chemistry , vol.270 , pp. 8439-8445
    • Doktycz, M.J.1    Morris, M.D.2    Dormady, S.J.3    Beattie, K.L.4    Jacobson, K.B.5
  • 41
    • 0030744542 scopus 로고    scopus 로고
    • The thermodynamic advantage of DNA oligonucleotide "stacking hybridization" reactions: Energetics of a DNA nick
    • M. J. Lane T. Paner I. Kashin B. D. Faldasz B. Li F. J. Gallo A. S. Benight 1997 The thermodynamic advantage of DNA oligonucleotide "stacking hybridization" reactions: energetics of a DNA nick Nucleic Acids Research 25 611 616
    • (1997) Nucleic Acids Research , vol.25 , pp. 611-616
    • Lane, M.J.1    Paner, T.2    Kashin, I.3    Faldasz, B.D.4    Li, B.5    Gallo, F.J.6    Benight, A.S.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.