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Volumn 100, Issue 5, 2008, Pages 517-525

How multilocus genotypic pattern helps to understand the history of selfing populations: A case study in Medicago truncatula

Author keywords

Allozyme; Genetic diversity; Medicago truncatula; Microsatellite; Population structure; Selfing rate

Indexed keywords

MICROSATELLITE DNA;

EID: 42449090781     PISSN: 0018067X     EISSN: 13652540     Source Type: Journal    
DOI: 10.1038/hdy.2008.5     Document Type: Article
Times cited : (48)

References (52)
  • 1
    • 33645501337 scopus 로고    scopus 로고
    • Distribution of genetic variation within and among local populations of Arabidopsis thaliana over its species range
    • Bakker EG, Stahl EA, Toomajian C, Nordborg M, Kreitman M, Bergelson J (2006). Distribution of genetic variation within and among local populations of Arabidopsis thaliana over its species range. Mol Ecol 15: 1405-1418.
    • (2006) Mol Ecol , vol.15 , pp. 1405-1418
    • Bakker, E.G.1    Stahl, E.A.2    Toomajian, C.3    Nordborg, M.4    Kreitman, M.5    Bergelson, J.6
  • 2
    • 0041645262 scopus 로고    scopus 로고
    • Characterization of microsatellite loci in the diploid legume Medicago truncatula (barrel medic)
    • Baquerizot-Audiot E, Desplanques B, Prosperi JM, Santoni S (2001). Characterization of microsatellite loci in the diploid legume Medicago truncatula (barrel medic). Mol Ecol Notes 1: 1-3.
    • (2001) Mol Ecol Notes , vol.1 , pp. 1-3
    • Baquerizot-Audiot, E.1    Desplanques, B.2    Prosperi, J.M.3    Santoni, S.4
  • 4
  • 5
    • 84974619640 scopus 로고    scopus 로고
    • Evolutionary and ecological genetics of Medicago truncatula
    • Bataillon T, Ronfort J (2006). Evolutionary and ecological genetics of Medicago truncatula. The Medicago Handbook. http://www.noble.org/ MedicagoHandbook/pdf/EvolutionaryEcologicalGenetics.pdf
    • (2006) The Medicago Handbook
    • Bataillon, T.1    Ronfort, J.2
  • 7
    • 0031961197 scopus 로고    scopus 로고
    • Genetic variation within and among populations of Arabidopsis thaliana
    • Bergelson J, Stahl E, Dudek S, Kreitman M (1998). Genetic variation within and among populations of Arabidopsis thaliana. Genetics 148: 1311-1323.
    • (1998) Genetics , vol.148 , pp. 1311-1323
    • Bergelson, J.1    Stahl, E.2    Dudek, S.3    Kreitman, M.4
  • 8
    • 0029659440 scopus 로고    scopus 로고
    • High level of polymorphism and spatial structure in a selfing plant species, Medicago truncatula (Leguminosae), shown using RAPD markers
    • Bonnin I, Huguet T, Gherardi M, Prosperi JM, Olivieri I (1996). High level of polymorphism and spatial structure in a selfing plant species, Medicago truncatula (Leguminosae), shown using RAPD markers. Am J Bot 83: 843-855.
    • (1996) Am J Bot , vol.83 , pp. 843-855
    • Bonnin, I.1    Huguet, T.2    Gherardi, M.3    Prosperi, J.M.4    Olivieri, I.5
  • 9
    • 0034994675 scopus 로고    scopus 로고
    • Spatial effects and rare outcrossing events in Medicago truncatula (Fabaceae)
    • Bonnin I, Ronfort J, Wozniak F, Olivieri I (2001). Spatial effects and rare outcrossing events in Medicago truncatula (Fabaceae). Mol Ecol 10: 1371-1383.
    • (2001) Mol Ecol , vol.10 , pp. 1371-1383
    • Bonnin, I.1    Ronfort, J.2    Wozniak, F.3    Olivieri, I.4
  • 10
    • 13444266436 scopus 로고    scopus 로고
    • The influence of genetic factors and population dynamics on the mating system of the hermaphroditic freshwater snail Biomphalaria pfeifferi
    • Charbonnel N, Rasatavonjizay R, Sellin E, Brémond P, Jarne P (2005). The influence of genetic factors and population dynamics on the mating system of the hermaphroditic freshwater snail Biomphalaria pfeifferi. Oikos 108: 283-296.
    • (2005) Oikos , vol.108 , pp. 283-296
    • Charbonnel, N.1    Rasatavonjizay, R.2    Sellin, E.3    Brémond, P.4    Jarne, P.5
  • 11
    • 0027305597 scopus 로고
    • The effect of deleterious mutations on neutral molecular variation
    • Charlesworth B, Morgan MT, Charlesworth D (1993). The effect of deleterious mutations on neutral molecular variation. Genetics 134: 1289-1303.
    • (1993) Genetics , vol.134 , pp. 1289-1303
    • Charlesworth, B.1    Morgan, M.T.2    Charlesworth, D.3
  • 12
    • 0032191567 scopus 로고    scopus 로고
    • Allozyme diversity in Leavenworthia populations with different inbreeding levels
    • Charlesworth D, Yang Z (1998). Allozyme diversity in Leavenworthia populations with different inbreeding levels. Heredity 81: 453-461.
    • (1998) Heredity , vol.81 , pp. 453-461
    • Charlesworth, D.1    Yang, Z.2
  • 13
    • 2542454044 scopus 로고    scopus 로고
    • Past and current gene flow in the selfing, wind-dispersed species Mycelis muralis in western Europe
    • Chauvet S, van der Velde M, Imbert E, Guillemin ML, Mayol M, Riba M et al. (2004). Past and current gene flow in the selfing, wind-dispersed species Mycelis muralis in western Europe. Mol Ecol 13: 1391-1407.
    • (2004) Mol Ecol , vol.13 , pp. 1391-1407
    • Chauvet, S.1    van der Velde, M.2    Imbert, E.3    Guillemin, M.L.4    Mayol, M.5    Riba, M.6
  • 14
    • 0033180478 scopus 로고    scopus 로고
    • Medicago truncatula: A model in the making!
    • Cook DR (1999). Medicago truncatula: a model in the making!. Curr Opin Plant Biol 2: 301-304.
    • (1999) Curr Opin Plant Biol , vol.2 , pp. 301-304
    • Cook, D.R.1
  • 15
    • 0034533424 scopus 로고    scopus 로고
    • Inferring recent outcrossing rates using multilocus individual heterozygosity: Application to evolving wheat populations
    • Enjalbert J, David JL (2000). Inferring recent outcrossing rates using multilocus individual heterozygosity: application to evolving wheat populations. Genetics 156: 1973-1982.
    • (2000) Genetics , vol.156 , pp. 1973-1982
    • Enjalbert, J.1    David, J.L.2
  • 16
    • 0029034186 scopus 로고
    • Microsatellite variation in honey bee (Apis mellifera L.) populations: Hierarchical genetic structure and test of the infinite allele and stepwise mutation models
    • Estoup A, Garnery L, Solignac M, Cornuet JM (1995). Microsatellite variation in honey bee (Apis mellifera L.) populations: hierarchical genetic structure and test of the infinite allele and stepwise mutation models. Genetics 140: 679-695.
    • (1995) Genetics , vol.140 , pp. 679-695
    • Estoup, A.1    Garnery, L.2    Solignac, M.3    Cornuet, J.M.4
  • 18
    • 0035050333 scopus 로고    scopus 로고
    • Comparative allozyme and microsatellite population structure in a narrow endemic plant species, Centaurea corymbosa Pourret (Asteraceae)
    • Freville H, Justy F, Olivieri I (2001). Comparative allozyme and microsatellite population structure in a narrow endemic plant species, Centaurea corymbosa Pourret (Asteraceae). Mol Ecol 10: 879-889.
    • (2001) Mol Ecol , vol.10 , pp. 879-889
    • Freville, H.1    Justy, F.2    Olivieri, I.3
  • 20
    • 0035047638 scopus 로고    scopus 로고
    • Microsatellite analysis of the inbreeding weed Barren Brome (Anisantha sterilis) reveals genetic diversity at the within and between-farm scale
    • Green JM, Barker JHA, Marshall EJP, Froud-Williams RJ, Peters NCB, Arnold GM et al. (2001). Microsatellite analysis of the inbreeding weed Barren Brome (Anisantha sterilis) reveals genetic diversity at the within and between-farm scale. Mol Ecol 10: 1035-1045.
    • (2001) Mol Ecol , vol.10 , pp. 1035-1045
    • Green, J.M.1    Barker, J.H.A.2    Marshall, E.J.P.3    Froud-Williams, R.J.4    Peters, N.C.B.5    Arnold, G.M.6
  • 21
    • 0001983532 scopus 로고
    • Allozyme diversity in plant species
    • Brown AHD, Clegg MT, Kahter AL and Weir BS eds, Sinauer Associates Inc, Sunderland, MA
    • Hamrick JL, Godt MJW (1990). Allozyme diversity in plant species. In: Brown AHD, Clegg MT, Kahter AL and Weir BS (eds). Plant Population Genetics, Breeding and Genetic Resources. Sinauer Associates Inc.: Sunderland, MA.
    • (1990) Plant Population Genetics, Breeding and Genetic Resources
    • Hamrick, J.L.1    Godt, M.J.W.2
  • 22
    • 0030429397 scopus 로고    scopus 로고
    • Effect of life history traits on genetic diversity in plant species
    • Hamrick JL, Godt MJW (1996). Effect of life history traits on genetic diversity in plant species. Philos Trans R Soc Lond B 351: 1291-1298.
    • (1996) Philos Trans R Soc Lond B , vol.351 , pp. 1291-1298
    • Hamrick, J.L.1    Godt, M.J.W.2
  • 23
    • 0036899010 scopus 로고    scopus 로고
    • SPAGeDi: A versatile computer program to analyse spatial genetic structure at the individual or population levels
    • Hardy O, Vekemans X (2002). SPAGeDi: a versatile computer program to analyse spatial genetic structure at the individual or population levels. Mol Ecol Notes 2: 618-620.
    • (2002) Mol Ecol Notes , vol.2 , pp. 618-620
    • Hardy, O.1    Vekemans, X.2
  • 24
    • 0033179890 scopus 로고    scopus 로고
    • Isolation by distance in a continuous population: Reconciliation between spatial autocorrelation analysis and population genetics models
    • Hardy OJ, Vekemans X (1999). Isolation by distance in a continuous population: reconciliation between spatial autocorrelation analysis and population genetics models. Heredity 83: 145-154.
    • (1999) Heredity , vol.83 , pp. 145-154
    • Hardy, O.J.1    Vekemans, X.2
  • 25
    • 0043015531 scopus 로고    scopus 로고
    • Microsatellites, from molecules to populations and back
    • Jarne P, Lagoda P (1996). Microsatellites, from molecules to populations and back. Trends Ecol Evol 11: 424-429.
    • (1996) Trends Ecol Evol , vol.11 , pp. 424-429
    • Jarne, P.1    Lagoda, P.2
  • 26
    • 7244223509 scopus 로고    scopus 로고
    • Neutral genetic variation among wild North American populations of the weedy plant Arabidopsis thaliana is not geographically structured
    • Jorgensen S, Mauricio R (2004). Neutral genetic variation among wild North American populations of the weedy plant Arabidopsis thaliana is not geographically structured. Mol Ecol 13: 3403-3413.
    • (2004) Mol Ecol , vol.13 , pp. 3403-3413
    • Jorgensen, S.1    Mauricio, R.2
  • 27
    • 0036854309 scopus 로고    scopus 로고
    • Parallel patterns of sequence variation within and between populations at three loci of Arabidopsis thaliana
    • Kuittinen H, Salguero D, Aguade M (2002). Parallel patterns of sequence variation within and between populations at three loci of Arabidopsis thaliana. Mol Biol Evol 19: 2030-2034.
    • (2002) Mol Biol Evol , vol.19 , pp. 2030-2034
    • Kuittinen, H.1    Salguero, D.2    Aguade, M.3
  • 28
    • 42449140126 scopus 로고    scopus 로고
    • Lesins KA, Lesins I (1979). Genus Medicago (Leguminosae). A Taxogenetic study. Dr W Junk b.v. Publishers: The Hague (Netherlands).
    • Lesins KA, Lesins I (1979). Genus Medicago (Leguminosae). A Taxogenetic study. Dr W Junk b.v. Publishers: The Hague (Netherlands).
  • 29
    • 0029188083 scopus 로고
    • Spatial genetic structure of a tropical understory shrub, Psychotria officinalis (Rubiaceae)
    • Loiselle BA, Sork VL, Nason J, Graham C (1995). Spatial genetic structure of a tropical understory shrub, Psychotria officinalis (Rubiaceae). Am J Bot 82: 1420-1425.
    • (1995) Am J Bot , vol.82 , pp. 1420-1425
    • Loiselle, B.A.1    Sork, V.L.2    Nason, J.3    Graham, C.4
  • 30
    • 0016220238 scopus 로고
    • The hitch-hiking effect of a favourable gene
    • Maynard Smith J, Haigh J (1974). The hitch-hiking effect of a favourable gene. Genet Res 23: 23-35.
    • (1974) Genet Res , vol.23 , pp. 23-35
    • Maynard Smith, J.1    Haigh, J.2
  • 31
    • 4344670863 scopus 로고    scopus 로고
    • Small effective population sizes in a widespread selfing species, Lymnaea truncatula (Gastropoda: Pulmonata)
    • Meunier C, Hurtrez-Bousses S, Durand P, Rondelaud D, Renaud F (2004). Small effective population sizes in a widespread selfing species, Lymnaea truncatula (Gastropoda: Pulmonata). Mol Ecol 13: 2535-2543.
    • (2004) Mol Ecol , vol.13 , pp. 2535-2543
    • Meunier, C.1    Hurtrez-Bousses, S.2    Durand, P.3    Rondelaud, D.4    Renaud, F.5
  • 32
    • 42449113297 scopus 로고
    • Molecular Evolutionary Genetics
    • New York
    • Nei M (1987). Molecular Evolutionary Genetics. Columbia Univeristy Press: New York.
    • (1987) Columbia Univeristy Press
    • Nei, M.1
  • 33
    • 0033962299 scopus 로고    scopus 로고
    • Linkage disequilibrium, gene trees and selfing: An ancestral recombination graph with partial self-fertilization
    • Nordborg M (2000). Linkage disequilibrium, gene trees and selfing: an ancestral recombination graph with partial self-fertilization. Genetics 154: 923-929.
    • (2000) Genetics , vol.154 , pp. 923-929
    • Nordborg, M.1
  • 34
    • 0030822809 scopus 로고    scopus 로고
    • The coalescent process with selfing
    • Nordborg M, Donnelly P (1997). The coalescent process with selfing. Genetics 146: 1185-1195.
    • (1997) Genetics , vol.146 , pp. 1185-1195
    • Nordborg, M.1    Donnelly, P.2
  • 36
    • 0023427397 scopus 로고
    • On the theory of partially inbreeding finite populations. I. Partial selfing
    • Pollak E (1987). On the theory of partially inbreeding finite populations. I. Partial selfing. Genetics 117: 353-360.
    • (1987) Genetics , vol.117 , pp. 353-360
    • Pollak, E.1
  • 37
    • 33745500269 scopus 로고    scopus 로고
    • Ecological significance of microsatellite variation in western North American populations of Bromus tectorum
    • Ramakrishnan AP, Meyer SE, Fairbanks DJ, Coleman CE (2006). Ecological significance of microsatellite variation in western North American populations of Bromus tectorum. Plant Species Biol 21: 61-73.
    • (2006) Plant Species Biol , vol.21 , pp. 61-73
    • Ramakrishnan, A.P.1    Meyer, S.E.2    Fairbanks, D.J.3    Coleman, C.E.4
  • 38
    • 42449083240 scopus 로고    scopus 로고
    • Raymond M, Rousset F (1995, Genepop Version 1.2, population genetics software for exact tests and ecumenicism. J Hered 86: 248-249
    • Raymond M, Rousset F (1995). Genepop (Version 1.2): population genetics software for exact tests and ecumenicism. J Hered 86: 248-249.
  • 39
    • 0001776777 scopus 로고
    • Joint maximum likelihood estimation of genetic and mating structure using open-pollinated progenies
    • Ritland K (1986). Joint maximum likelihood estimation of genetic and mating structure using open-pollinated progenies. Biometrics 42: 25-43.
    • (1986) Biometrics , vol.42 , pp. 25-43
    • Ritland, K.1
  • 40
    • 85047683041 scopus 로고    scopus 로고
    • Extensions of models for the estimation of mating systems using n independent loci
    • Ritland K (2002). Extensions of models for the estimation of mating systems using n independent loci. Heredity 88: 221-228.
    • (2002) Heredity , vol.88 , pp. 221-228
    • Ritland, K.1
  • 41
    • 84966167686 scopus 로고
    • A model for the estimation of outcrossing rate and gene frequencies using n independent loci
    • Ritland K, Jain S (1981). A model for the estimation of outcrossing rate and gene frequencies using n independent loci. Heredity 47: 35-52.
    • (1981) Heredity , vol.47 , pp. 35-52
    • Ritland, K.1    Jain, S.2
  • 42
    • 33846564955 scopus 로고    scopus 로고
    • Microsatellite diversity and broad scale geographic structure in a model legume: Building a set of nested core collection for studying naturally occurring variation in Medicago truncatula
    • Ronfort J, Bataillon T, Santoni S, Delalande M, David JL, Prosperi JM (2006). Microsatellite diversity and broad scale geographic structure in a model legume: building a set of nested core collection for studying naturally occurring variation in Medicago truncatula. BMC Plant Biol 6: 28.
    • (2006) BMC Plant Biol , vol.6 , pp. 28
    • Ronfort, J.1    Bataillon, T.2    Santoni, S.3    Delalande, M.4    David, J.L.5    Prosperi, J.M.6
  • 43
    • 0025761269 scopus 로고
    • Intraspecific variation in population gene diversity and effective population size correlates with the mating system in plants
    • Schoen DJ, Brown AH (1991). Intraspecific variation in population gene diversity and effective population size correlates with the mating system in plants. Proc Natl Acad Sci USA 88: 4494-4497.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 4494-4497
    • Schoen, D.J.1    Brown, A.H.2
  • 44
    • 35448968970 scopus 로고    scopus 로고
    • Effective population size associated with self-fertilization: Lessons from temporal changes in allele frequencies in the selfing annual Medicago truncatula
    • Siol M, Bonnin I, Olivieri I, Prosperi JM, Ronfort J (2007). Effective population size associated with self-fertilization: lessons from temporal changes in allele frequencies in the selfing annual Medicago truncatula. J Evol Biol 20: 2349-2360.
    • (2007) J Evol Biol , vol.20 , pp. 2349-2360
    • Siol, M.1    Bonnin, I.2    Olivieri, I.3    Prosperi, J.M.4    Ronfort, J.5
  • 45
    • 0031597284 scopus 로고    scopus 로고
    • Within population genetic structure in Quercus robur L. & Quercus petraea (Matt.) Liebl. assessed with isozymes and microsatellites
    • Streiff R, Labbe T, Bacilieri R, Steinkellner H, Glössl J, Kremer A (1998). Within population genetic structure in Quercus robur L. & Quercus petraea (Matt.) Liebl. assessed with isozymes and microsatellites. Mol Ecol 7: 317-328.
    • (1998) Mol Ecol , vol.7 , pp. 317-328
    • Streiff, R.1    Labbe, T.2    Bacilieri, R.3    Steinkellner, H.4    Glössl, J.5    Kremer, A.6
  • 46
    • 51249171888 scopus 로고
    • A rapid and inexpensive method for isolation of total DNA from dehydrated plant tissue
    • Tai TH, Tanksley SD (1990). A rapid and inexpensive method for isolation of total DNA from dehydrated plant tissue. Plant Mol Biol Rep 8: 297-303.
    • (1990) Plant Mol Biol Rep , vol.8 , pp. 297-303
    • Tai, T.H.1    Tanksley, S.D.2
  • 47
    • 0036067336 scopus 로고    scopus 로고
    • Multilocus genetic structure at contrasted spatial scales of the endangered water fern Marsilea strigosa (Marsileaceae, Pteridophyta)
    • Vitalis R, Riba M, Colas B, Grillas P, Olivieri I (2002). Multilocus genetic structure at contrasted spatial scales of the endangered water fern Marsilea strigosa (Marsileaceae, Pteridophyta). Am J Bot 89: 1142-1155.
    • (2002) Am J Bot , vol.89 , pp. 1142-1155
    • Vitalis, R.1    Riba, M.2    Colas, B.3    Grillas, P.4    Olivieri, I.5
  • 48
    • 0033033618 scopus 로고    scopus 로고
    • Developments in predicting the effective size of subdivided populations
    • Wang J, Caballero A (1999). Developments in predicting the effective size of subdivided populations. Heredity 82: 212-226.
    • (1999) Heredity , vol.82 , pp. 212-226
    • Wang, J.1    Caballero, A.2
  • 49
    • 0021566877 scopus 로고
    • Estimating F-statistics for the analysis of population structure
    • Weir BS, Cockerham CC (1984). Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
    • (1984) Evolution , vol.38 , pp. 1358-1370
    • Weir, B.S.1    Cockerham, C.C.2
  • 51
    • 0001986842 scopus 로고
    • Visualization and interpretation of plant isozymes
    • Soltis DE and Soltis PS eds, Chapman and Hall: London
    • Wendel JF, Weeden NF (1989b). Visualization and interpretation of plant isozymes. In: Soltis DE and Soltis PS (eds). Isozymes in Plant Biology. Chapman and Hall: London.
    • (1989) Isozymes in Plant Biology
    • Wendel, J.F.1    Weeden, N.F.2


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