Fine mapping of Ekp-1, a locus associated with silkworm (Bombyx mori) proleg development

Heredity

Volumn 100, Issue 5, 2008, Pages 533-540

  Xiang, H ^a   Li, M ^a,b   Yang, F ^a   Guo, Q ^a   Zhan, S ^a   Lin, H ^a   Miao, X ^a   Huang, Y ^a  

^a INSTITUTE OF PLANT PHYSIOLOGY AND ECOLOGY   (China)

^b INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

BAC abd A; Cleaved amplified polymorphic sequence (CAPS); Ekp; Proleg; Simple sequence repeat (SSR)

Indexed keywords

INSECT PROTEIN; PRIMER DNA;

CHROMOSOME; GENETIC ANALYSIS; LARVAL DEVELOPMENT; MOLECULAR ANALYSIS; MOTH; MUTATION; POLYMERASE CHAIN REACTION; RECOMBINATION;

ANIMAL; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CHROMOSOME MAP; GENE; GENETIC MARKER; GENETICS; GROWTH, DEVELOPMENT AND AGING; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; SILKWORM;

ANIMALS; BASE SEQUENCE; BOMBYX; CHROMOSOME MAPPING; CHROMOSOMES, ARTIFICIAL, BACTERIAL; DNA PRIMERS; GENES, INSECT; GENETIC MARKERS; INSECT PROTEINS; POLYMERASE CHAIN REACTION;

BACTERIA (MICROORGANISMS); BOMBYX MORI; LEPIDOPTERA;

EID: 42449085913     PISSN: 0018067X     EISSN: 13652540     Source Type: Journal    
DOI: 10.1038/hdy.2008.10     Document Type: Article

References (41)

1. Akbari OS, Bousum A, Bae E, Drewell ER (2006). Unraveling cis-regulatory mechanisms at the abdominal-A and Abdominal-B genes in the Drosophila bithorax complex. Dev Biol 293: 294-304.
2. Averof M (2002). Arthropod Hox genes: insights on the evolutionary forces that shape gene functions. Curr Opin Gene Develop 12: 386-392.
3. Bender W, Akam M, Karch F, Beachy PA, Peifer M, Spierer P et al. (1983). Molecular genetics of the Bithorax complex in Drosophila melanogaster. Science 221: 23-29.
4. Chetelat RT, Meglic V, Cisneros P (2000). A genetic map of tomato based on BC(1) Lycopersicon esculentum x Solanum lycopersicoides reveals overall synteny but suppressed recombination between these homologous genomes. Genetics 154: 857-867.
5. Chopra VS, Mishra RK (2006). Miracles in Hox gene regulation. Bioessays 28: 445-448.
6. Drewell RA, Bae E, Burr J, Lewis EB (2002). Transcription defines the embryonic domains of cis-regulatory activity at the Drosophila bithorax complex. Proc Natl Acad Sci USA 99: 16853-16858.
7. Ganal MW, Tanksley SD (1996). Recombination around the Tm2a and Mi resistance genes in different crosses of Lycopersiconperuvianum. Theor Appl Genet 92: 101-108.
8. Goldsmith MR (1995). The genetics of the silkworm: revisiting an ancient model system. In: Goldsmith MR, Wilkins AS (eds). Molecular Model Systems in the Lepidoptera. Cambridge University Press: New York. pp 21-76.
9. Goldsmith MR, Shimada T, Abe H (2005). The genetics and genomics of the silkworm, Bombyx mori. Annu Rev Entomol 50: 71-100.
10. Haupt W, Fischer TC, Winderl S, Fransz P, Torres-Ruiz RA (2001). The CENTROMERE1 (CEN1) region of Arabidopsisthaliana: architecture and functional impact of chromatin. Plant J 27: 285-296.
11. Hughes CL, Kaufman TC (2002). Hox genes and the evolution of the arthropod body plan. Evol Dev 4: 459-499.
12. Itikawa N (1943). Genetic and embryological studies of a dominant mutant, 'new additional crescent', of the silkworm. Jap J Genet 19: 182-188.
13. Karch F, Weiffenbach B, Peifer M, Bender W, Duncan I, Celniker S et al. (1985). The abdominal region of the Bithorax complex. Cell 43: 81-96.
14. Li L, Garvin DF (2003). Molecular mapping of Or, a gene inducing beta-carotene accumulation in cauliflower (Brassica oleracea L. var. botrytis). Genome 46: 588-594.
15. Li MW, Guo QH, Hou CX, Miao XX, Xu AY, Guo XJ et al. (2006). Linkage and mapping analyses of the densonucleosis non-susceptible gene nsd-Z in the silkworm Bombyx mori using SSR markers. Genome 49: 397-402.
16. Miao XX, Xu SJ, Li MH, Li MW, Huang JH, Dai FY et al. (2005). Simple sequence repeat-based consensus linkage map of Bombyx mori. Proc Natl Acad Sci USA 102: 16303-16308.
17. Murakami A, Imai HT (1974). Cytological evidence for holocentric chromosomes of the silkworm, Bombyx mori and B. mandarina (Bombicidae, Lepidoptera). Chromosoma 80: 167-178.
18. Nagy LM, Grbic M (1999). Cell lineages in larval development and evolution of holometabolous insects. In: Hall BK, Wake MH (eds). The Origin and Evolution of Larval Forms. Academic Press: San Diego. pp 275-300.
19. Okazaki S, Tsuchida K, Maekawa H, Ishikawa H, Fujiwara H (1993). Identification of a pentanucleotide telomeric sequence, (TTAGG)n, in the silkworm Bombyx mori and in other insects. Mol Cell Biol 13: 1424-1432.
20. Ouweneel WJ (1976). Developmental genetics of homoeosis. Adv Genet 18: 179-248.
21. Panganiban G, Nagy L, Carroll SB (1994). The role of the Distal-less gene in the development and evolution of insect limbs. Curr Biol 4: 671-675.
22. Pimpinelli S, Goday C (1989). Unusual kinetochores and chromatin diminution in Parascaris. Trends Genet 5: 310-315.
23. Ronshaugen M, Biemar F, Piel J, Levine M, Lai MC (2005). The Drosophila microRNA iab-4 causes a dominant homeotic transformation of halteres to wings. Genes Dev 19: 2947-2952.
24. Sambrook J, Fritsch EF, Maniatis T (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory Press: New York. pp 2-50.
25. Sanchez-Herrero E (1991). Control of the expression of the bithorax complex genes abdominal-A and Abdominal-B by cis-regulatory regions in Drosophila embryos. Development 111: 437-449.
26. Suzuki Y, Palopoli MF (2001). Evolution of insect abdominal appendages: are prolegs homologous or convergent traits? Dev Genes Evol 211: 486-492.
27. Tazima Y (1964). E-group as a tool of developmental genetics. In: Tazima Y (ed). The Genetics of the Silkworm. Logos Press: London. pp 60-75.
28. Tong CZ, Jin YF, Zhang YZ (2006). Computational prediction of microRNA genes in silkworm genome. J Zhejiang Univ Sci B 7: 806-816.
29. Ueno K, Hui CC, Fukuta M, Suzuki Y (1992). Molecular analysis of the deletion mutants in the E homeotic complex of the silkworm Bombyx mori. Development 114: 555-563.
30. Ueno K, Suzuki Y (1997). p260/270 expressed in embryonic abdominal leg cells of Bombyx mori can transfer palmitate to peptides. J Biol Chem 272: 13519-13526.
31. Vachon G, Cohen B, Pfeifle C, McGuffin ME, Botas J, Cohen SM (1992). Homeotic genes of the bithorax complex repress limb development in the abdomen of the Drosophila embryo through the target gene Distal-less. Cell 71: 437-450.
32. Van Daelen RA, Gerbens F, van Ruissen F, Aarts J, Hontelez J, Zabel P (1993). Long-range physical maps of two loci (Aps-1 and GP79) flanking the root-knot nematode resistance gene (Mi) near the centromere of tomato chromosome 6. Plant Mol Biol 23: 185-192.
33. Wang ZX, Yano M, Yamanouchi U, Iwamoto M, Monna L, Hayasaka H et al. (1999). The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine rich repeat class of plant disease resistance genes. Plant J 19: 55-64.
34. Warren RW, Nagy L, Selegue J, Gates J, Carroll S (1994). Evolution of homeotic gene regulation and function in flies and butterflies. Nature 372: 458-461.
35. Wu C, Asakawa S, Shimizu N, Kawasaki S, Yasukochi Y (1999). Construction and characterization of bacterial artificial chromosome libraries from the silkworm, Bombyx mori. Mol Gen Genet 261: 698-706.
36. Xia Q, Zhou Z, Lu C, Cheng D, Dai F, Li B et al. (2004). A draft sequence for the genome of the domesticated silkworm (Bombyxmori). Science 306: 1937-1940.
37. Xiang H (2008). Preliminary study of the structure and function of the E-complex genes in the silkworm (Bombyx mori). Insect Gut Bacterial Community - Diversity Census and Functional Exploration. PhD thesis, Shanghai Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, The Chinese Academy of Sciences, Shanghai, P.R. China. pp 96-109.
38. Yasukochi Y, Ashakumary LA, Wu C, Yoshido A, Nohata J, Mita K et al. (2004). Organization of the Hox gene cluster of the silkworm, Bombyxmori: a split of the Hox cluster in a non-Drosophila insect. Dev Genes Evol 214: 606-614.
39. Yin JM, Guo WZ, Yang LM, Liu LW, Zhang TZ (2006). Physical mapping of the Rf1 fertility-restoring gene to a 100 kb region in cotton. Theor Appl Genet 112: 1318-1325.
40. Zeng L, Yin Z, Chen J, Leung H, Wang GL (2002). Fine genetic mapping and physical delimitation of the lesion mimic gene Spl11to a 160-kb DNA segment of the rice genome. Mol Genet Genomics 268: 253-261.
41. Zheng Z, Khoo A, Fambrough Jr D, Garza L, Booker R (1999). Homeotic gene expression in the wild-type and a homeotic mutant of the moth Manduca sexta. Dev Genes Evol 209: 460-472.