-
1
-
-
31144445851
-
rpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria with descriptions of Mycobacterium bolletii sp. nov., Mycobacterium phocaicum sp. nov. and Mycobacterium aubagnense sp. nov
-
Adékambi, T., P. Berger, D. Raoult, and M. Drancourt. 2006. rpoB gene sequence-based characterization of emerging non-tuberculous mycobacteria with descriptions of Mycobacterium bolletii sp. nov., Mycobacterium phocaicum sp. nov. and Mycobacterium aubagnense sp. nov. Int. J. Syst. Evol. Microbiol. 56:133-143.
-
(2006)
Int. J. Syst. Evol. Microbiol
, vol.56
, pp. 133-143
-
-
Adékambi, T.1
Berger, P.2
Raoult, D.3
Drancourt, M.4
-
2
-
-
33748775169
-
Survival of environmental mycobacteria in Acanthamoeba polyphaga
-
Adékambi, T., S. B. Salah, M. Khlif, D. Raoult, and M. Drancourt. 2006. Survival of environmental mycobacteria in Acanthamoeba polyphaga. Appl. Environ. Microbiol. 72:5974-5981.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 5974-5981
-
-
Adékambi, T.1
Salah, S.B.2
Khlif, M.3
Raoult, D.4
Drancourt, M.5
-
3
-
-
9744231340
-
Dissection of phylogenetic relationships among 19 rapidly growing Mycobacterium species by 16S rRNA, hsp65, sodA, recA and rpoB gene sequencing
-
Adékambi, T., and M. Drancourt. 2004. Dissection of phylogenetic relationships among 19 rapidly growing Mycobacterium species by 16S rRNA, hsp65, sodA, recA and rpoB gene sequencing. Int. J. Syst. Evol. Microbiol. 54:2095-2105.
-
(2004)
Int. J. Syst. Evol. Microbiol
, vol.54
, pp. 2095-2105
-
-
Adékambi, T.1
Drancourt, M.2
-
4
-
-
0346218268
-
rpoB-based identification of nonpigmented and late-pigmenting rapidly growing mycobacteria
-
Adékambi, T., P. Colson, and M. Drancourt. 2003. rpoB-based identification of nonpigmented and late-pigmenting rapidly growing mycobacteria. J. Clin. Microbiol. 41:5699-5708.
-
(2003)
J. Clin. Microbiol
, vol.41
, pp. 5699-5708
-
-
Adékambi, T.1
Colson, P.2
Drancourt, M.3
-
5
-
-
0036781756
-
-
Brown-Elliott, B. A., and R. J. Wallace, Jr. 2002. Clinical and taxonomic status of pathogenic nonpigmented or late-pigmenting rapidly growing mycobacteria. Clin. Microbiol. Rev. 15:716-746.
-
Brown-Elliott, B. A., and R. J. Wallace, Jr. 2002. Clinical and taxonomic status of pathogenic nonpigmented or late-pigmenting rapidly growing mycobacteria. Clin. Microbiol. Rev. 15:716-746.
-
-
-
-
6
-
-
0003669366
-
-
Centers for Disease Control and Prevention, Atlanta, GA
-
Butler, W. R., M. M. Floyd, V. Silcox, G. Cage, E. Desmond, P. S. Duffey, L. S. Guthertz, W. M. Gross, K. C. Jost, Jr., S. L. Ramos, L. Thibert, and N. Warren. 1996. Standardized method for HPLC identification of mycolic acids of Mycobacteria. Centers for Disease Control and Prevention, Atlanta, GA.
-
(1996)
Standardized method for HPLC identification of mycolic acids of Mycobacteria
-
-
Butler, W.R.1
Floyd, M.M.2
Silcox, V.3
Cage, G.4
Desmond, E.5
Duffey, P.S.6
Guthertz, L.S.7
Gross, W.M.8
Jost Jr., K.C.9
Ramos, S.L.10
Thibert, L.11
Warren, N.12
-
7
-
-
2942560672
-
Evaluation of a high-throughput repetitive-sequence-based PCR system for DNA fingerprinting of Mycobacterium tuberculosis and Mycobacterium avium complex strains
-
Cangelosi, G. A., R. J. Freeman, K. N. Lewis, D. Livingston-Rosanoff, K. S. Shah, S. J. Milan, and S. V. Goldberg. 2004. Evaluation of a high-throughput repetitive-sequence-based PCR system for DNA fingerprinting of Mycobacterium tuberculosis and Mycobacterium avium complex strains. J. Clin. Microbiol. 42:2685-2693.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 2685-2693
-
-
Cangelosi, G.A.1
Freeman, R.J.2
Lewis, K.N.3
Livingston-Rosanoff, D.4
Shah, K.S.5
Milan, S.J.6
Goldberg, S.V.7
-
8
-
-
0141926347
-
Identifying Mycobacterium species and strain typing using a microfluidic labchip instrument
-
Cooksey, R. C., J. Limor, G. P. Morlock, and J. T. Crawford. 2003. Identifying Mycobacterium species and strain typing using a microfluidic labchip instrument. BioTechniques 35:786-794.
-
(2003)
BioTechniques
, vol.35
, pp. 786-794
-
-
Cooksey, R.C.1
Limor, J.2
Morlock, G.P.3
Crawford, J.T.4
-
9
-
-
33744798461
-
Infections due to rapidly growing mycobacteria
-
De Groote, M. A., and G. Huitt. 2006. Infections due to rapidly growing mycobacteria. Clin. Infect. Dis. 42:1756-1763.
-
(2006)
Clin. Infect. Dis
, vol.42
, pp. 1756-1763
-
-
De Groote, M.A.1
Huitt, G.2
-
10
-
-
13244273719
-
A multigene approach to phylogenetic analysis using the genus Mycobacterium as a model
-
Devulder, G., M. Perouse de Montclos, and J. P. Flandrois. 2005. A multigene approach to phylogenetic analysis using the genus Mycobacterium as a model. Int. J. Syst. Evol. Microbiol. 55:293-302.
-
(2005)
Int. J. Syst. Evol. Microbiol
, vol.55
, pp. 293-302
-
-
Devulder, G.1
Perouse de Montclos, M.2
Flandrois, J.P.3
-
11
-
-
0034130242
-
Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources
-
Dombek, P. E., L. K. Johnson, S. T. Zimmerley, and M. J. Sadowsky. 2000. Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources. Appl. Environ. Microbiol. 66:2572-2577.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 2572-2577
-
-
Dombek, P.E.1
Johnson, L.K.2
Zimmerley, S.T.3
Sadowsky, M.J.4
-
12
-
-
33744989933
-
A cord blood transplant recipient with Mycobacterium mucogenicum central venous catheter infection after infusion of tap water
-
Fleming, G. A., H. Frangoul, T. S. Dermody, and N. Halasa. 2006. A cord blood transplant recipient with Mycobacterium mucogenicum central venous catheter infection after infusion of tap water. Pediatr. Infect. Dis. J. 25:567-569.
-
(2006)
Pediatr. Infect. Dis. J
, vol.25
, pp. 567-569
-
-
Fleming, G.A.1
Frangoul, H.2
Dermody, T.S.3
Halasa, N.4
-
13
-
-
0029977926
-
Characterization of an SAV organism and proposal of Mycobacterium triplex sp. nov
-
Floyd, M. A., L. S. Guthertz, V. A. Silcox, P. S. Duffy, Y. Jang, E. P. Desmond, J. T. Crawford, and W. R. Butler. 1996, Characterization of an SAV organism and proposal of Mycobacterium triplex sp. nov. J. Clin. Microbiol. 34:2963-2967.
-
(1996)
J. Clin. Microbiol
, vol.34
, pp. 2963-2967
-
-
Floyd, M.A.1
Guthertz, L.S.2
Silcox, V.A.3
Duffy, P.S.4
Jang, Y.5
Desmond, E.P.6
Crawford, J.T.7
Butler, W.R.8
-
14
-
-
19944427111
-
Microbial DNA typing by automated repetitive-sequence-based PCR
-
Healy, M., J. Huong, T. Bittner, M. Lising, S. Frye, S. Raza, R. Schrock, J. Manry, A. Renwick, R. Nieto, C. Woods, J. Versalovic, and J. R. Lupski. 2005. Microbial DNA typing by automated repetitive-sequence-based PCR. J. Clin. Microbiol. 43:199-207.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 199-207
-
-
Healy, M.1
Huong, J.2
Bittner, T.3
Lising, M.4
Frye, S.5
Raza, S.6
Schrock, R.7
Manry, J.8
Renwick, A.9
Nieto, R.10
Woods, C.11
Versalovic, J.12
Lupski, J.R.13
-
15
-
-
0026585765
-
-
Hector J. S., Y. Pang, G. H. Mazurek, Y. Zhang, B. A. Brown, and R. J. Wallace, Jr. 1992. Large restriction patterns of genomic Mycobacterium fortuitum DNA as strain-specific markers and their use in epidemiologic investigation of four nosocomial outbreaks. J. Clin. Microbiol. 30:1250-1255.
-
Hector J. S., Y. Pang, G. H. Mazurek, Y. Zhang, B. A. Brown, and R. J. Wallace, Jr. 1992. Large restriction patterns of genomic Mycobacterium fortuitum DNA as strain-specific markers and their use in epidemiologic investigation of four nosocomial outbreaks. J. Clin. Microbiol. 30:1250-1255.
-
-
-
-
16
-
-
0028952049
-
Identification of Mycobacterium tuberculosis and M. avium complex directly from smear-positive sputum specimens and BACTEC 12B cultures by high-performance liquid chromatography with fluorescence detection and computer-driven pattern recognition models
-
Jost, K. C., Jr., D. F. Dunbar, S. S. Barth, V. L. Headley, and L. B. Elliott. 1995. Identification of Mycobacterium tuberculosis and M. avium complex directly from smear-positive sputum specimens and BACTEC 12B cultures by high-performance liquid chromatography with fluorescence detection and computer-driven pattern recognition models. J. Clin. Microbiol. 33:1270-1277.
-
(1995)
J. Clin. Microbiol
, vol.33
, pp. 1270-1277
-
-
Jost Jr., K.C.1
Dunbar, D.F.2
Barth, S.S.3
Headley, V.L.4
Elliott, L.B.5
-
17
-
-
42349113126
-
-
Kent, P. T., and G. P. Kubica. 1985. Public health laboratory. A guide for the level III laboratory. U.S. Department of Health and Human Services publication no. (CDC) 86-8230. Centers for Disease Control, Atlanta, GA.
-
Kent, P. T., and G. P. Kubica. 1985. Public health laboratory. A guide for the level III laboratory. U.S. Department of Health and Human Services publication no. (CDC) 86-8230. Centers for Disease Control, Atlanta, GA.
-
-
-
-
18
-
-
10844263356
-
An outbreak of bacteremias associated with Mycobacterium mucogenicum in a hospital water supply
-
Kline, S., S. Cameron, A. Streifel, M. A. Yakrus, F. Kairis, K. Peacock, J. Besser, and R. C. Cooksey. 2004. An outbreak of bacteremias associated with Mycobacterium mucogenicum in a hospital water supply. Infect. Control Hosp. Epidemiol. 25:1042-1049.
-
(2004)
Infect. Control Hosp. Epidemiol
, vol.25
, pp. 1042-1049
-
-
Kline, S.1
Cameron, S.2
Streifel, A.3
Yakrus, M.A.4
Kairis, F.5
Peacock, K.6
Besser, J.7
Cooksey, R.C.8
-
19
-
-
1542347511
-
Mycobacterium chelonae infections associated with face lifts - New Jersey, 2002-2003
-
Knackmuhs, G., M. Gerwel, C. Patterson, N. Cipollone, M. Navitski, R. Lawler, A. Monaco, M. Dillon, E. Bresnitz, C. Tan, R. Cooksey, and C. A. Robertson. 2004. Mycobacterium chelonae infections associated with face lifts - New Jersey, 2002-2003. MMWR Morb. Mortal. Wkly. Rep. 53:192-194.
-
(2004)
MMWR Morb. Mortal. Wkly. Rep
, vol.53
, pp. 192-194
-
-
Knackmuhs, G.1
Gerwel, M.2
Patterson, C.3
Cipollone, N.4
Navitski, M.5
Lawler, R.6
Monaco, A.7
Dillon, M.8
Bresnitz, E.9
Tan, C.10
Cooksey, R.11
Robertson, C.A.12
-
20
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar, S., K. Tamura, and M. Nei. 2004. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief. Bioinform. 5:150-163.
-
(2004)
Brief. Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
21
-
-
33747148005
-
Practical handbook for the phenotypic and genotypic identification of mycobacteria
-
Leão, S. C, A. Martin, G. I. Mejia, J. C. Palomino, J. Robledo, M. A. da Silva Telles, and F. Portaels ed, Brugge, Belgium
-
Leão, S. C., A. Martin, G. I. Mejia, J. C. Palomino, J. Robledo, M. A. da Silva Telles, and F. Portaels (ed.). 2004. Practical handbook for the phenotypic and genotypic identification of mycobacteria, p. 113-125. Vanden Broele, Brugge, Belgium.
-
(2004)
Vanden Broele
, pp. 113-125
-
-
-
22
-
-
34247628472
-
Species-specific identification of Leptospiraceae by 16S rRNA gene sequencing
-
Morey, R. E., R. L. Galloway, S. L. Bragg, A. G. Steigerwalt, L. W. Mayer, and P. N. Levett. 2006. Species-specific identification of Leptospiraceae by 16S rRNA gene sequencing. J. Clin. Microbiol. 44:3510-3516.
-
(2006)
J. Clin. Microbiol
, vol.44
, pp. 3510-3516
-
-
Morey, R.E.1
Galloway, R.L.2
Bragg, S.L.3
Steigerwalt, A.G.4
Mayer, L.W.5
Levett, P.N.6
-
23
-
-
0014866293
-
Identification of mycobacterial pathogens using colony characteristics
-
Runyon, E. H. 1970. Identification of mycobacterial pathogens using colony characteristics. Am. J. Clin. Pathol. 54:578-586.
-
(1970)
Am. J. Clin. Pathol
, vol.54
, pp. 578-586
-
-
Runyon, E.H.1
-
24
-
-
0019857162
-
Identification of clinically significant Mycobacterium fortuitum complex isolates
-
Silcox, V. A., R. C. Good, and M. M. Floyd. 1981. Identification of clinically significant Mycobacterium fortuitum complex isolates. J. Clin. Microbiol. 14:686-691.
-
(1981)
J. Clin. Microbiol
, vol.14
, pp. 686-691
-
-
Silcox, V.A.1
Good, R.C.2
Floyd, M.M.3
-
25
-
-
0028916737
-
-
Springer, B., E. C. Bottger, P. Kirschner, and R. J. Wallace, Jr. 1995. Phylogeny of the Mycobacterium chelonae-like organism based on partial sequencing of the 16S rRNA gene and proposal of Mycobacterium mucogenicum sp. nov. Int. J. Syst. Bacteriol. 45:262-267.
-
Springer, B., E. C. Bottger, P. Kirschner, and R. J. Wallace, Jr. 1995. Phylogeny of the Mycobacterium chelonae-like organism based on partial sequencing of the 16S rRNA gene and proposal of Mycobacterium mucogenicum sp. nov. Int. J. Syst. Bacteriol. 45:262-267.
-
-
-
-
26
-
-
0028949705
-
-
Steingrube, V. A., J. L. Gibson, B. A. Brown, Y. Zhang, R. W. Wilson, M. Rajagopalan, and R. J. Wallace, Jr. 1995. PCR amplification and restriction endonuclease analysis of a 65-kilodalton heat shock protein gene sequence for taxonomic separation of rapidly growing mycobacteria. J. Clin. Microbiol. 33:149-153.
-
Steingrube, V. A., J. L. Gibson, B. A. Brown, Y. Zhang, R. W. Wilson, M. Rajagopalan, and R. J. Wallace, Jr. 1995. PCR amplification and restriction endonuclease analysis of a 65-kilodalton heat shock protein gene sequence for taxonomic separation of rapidly growing mycobacteria. J. Clin. Microbiol. 33:149-153.
-
-
-
-
27
-
-
0027514742
-
Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis
-
Telenti, A., F. Marchesi, M. Balz, F. Bally, E. C. Bottger, and T. Bodmer. 1993. Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis. J. Clin. Microbiol. 31:175-178.
-
(1993)
J. Clin. Microbiol
, vol.31
, pp. 175-178
-
-
Telenti, A.1
Marchesi, F.2
Balz, M.3
Bally, F.4
Bottger, E.C.5
Bodmer, T.6
-
28
-
-
0029134774
-
Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: Criteria for bacterial strain typing
-
Tenover, F. C., R. D. Arbeit, R. V. Goering, P. A. Mickelsen, B. E. Murray, D. H. Persing, and B. Swaminathan. 1995. Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J. Clin. Microbiol. 33:2233-2239.
-
(1995)
J. Clin. Microbiol
, vol.33
, pp. 2233-2239
-
-
Tenover, F.C.1
Arbeit, R.D.2
Goering, R.V.3
Mickelsen, P.A.4
Murray, B.E.5
Persing, D.H.6
Swaminathan, B.7
-
29
-
-
33646079638
-
Biodiversity of amoebae and amoeba-resisting bacteria in a hospital water network
-
Thomas, V., K. Herrera-Rimann, D. S. Blanc, and G. Greub. 2006. Biodiversity of amoebae and amoeba-resisting bacteria in a hospital water network. Appl. Environ. Microbiol. 72:2428-2438.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 2428-2438
-
-
Thomas, V.1
Herrera-Rimann, K.2
Blanc, D.S.3
Greub, G.4
-
30
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., T. J. Gibson, F. Plewiak, F. Jeanmougin, and G. G. Higgins. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewiak, F.3
Jeanmougin, F.4
Higgins, G.G.5
-
31
-
-
0037396976
-
Impact of genotypic studies on mycobacterial taxonomy: The new mycobacteria of the 1990s
-
Tortoli, E. 2003. Impact of genotypic studies on mycobacterial taxonomy: the new mycobacteria of the 1990s. Clin. Microbiol. Rev. 16:319-354.
-
(2003)
Clin. Microbiol. Rev
, vol.16
, pp. 319-354
-
-
Tortoli, E.1
-
32
-
-
4844224397
-
Nontuberculous mycobacterial infections: A clinical review
-
Wagner, D., and L. S. Young. 2003. Nontuberculous mycobacterial infections: a clinical review. Infection 32:257-270.
-
(2003)
Infection
, vol.32
, pp. 257-270
-
-
Wagner, D.1
Young, L.S.2
-
33
-
-
17344367024
-
Nosocomial outbreaks/pseudo-outbreaks caused by nontuberculous mycobacteria
-
Wallace, R. J., Jr., B. A. Brown, and D. E. Griffith. 1998. Nosocomial outbreaks/pseudo-outbreaks caused by nontuberculous mycobacteria. Annu. Rev. Microbiol. 52:453-490.
-
(1998)
Annu. Rev. Microbiol
, vol.52
, pp. 453-490
-
-
Wallace Jr., R.J.1
Brown, B.A.2
Griffith, D.E.3
-
34
-
-
0027362899
-
Clinical significance, biochemical features, and susceptibility patterns of sporadic isolates of the Mycobacterium chelonae-like organism
-
Wallace, R. J., Jr., V. A. Silcox, M. Tsukamura, B. A. Brown, J. O. Kilburn, W. R. Butler, and G. Onyi. 1993. Clinical significance, biochemical features, and susceptibility patterns of sporadic isolates of the Mycobacterium chelonae-like organism. J. Clin. Microbiol. 31:3231-3239.
-
(1993)
J. Clin. Microbiol
, vol.31
, pp. 3231-3239
-
-
Wallace Jr., R.J.1
Silcox, V.A.2
Tsukamura, M.3
Brown, B.A.4
Kilburn, J.O.5
Butler, W.R.6
Onyi, G.7
-
35
-
-
0036203932
-
Pseudoepidemic due to a unique strain of Mycobacterium szulgai: Genotypic, phenotypic, and epidemiological analysis
-
Zhang, Q., R. Kennon, M. A. Koza, K. Hulten, and J. E. Clarridge III. 2002. Pseudoepidemic due to a unique strain of Mycobacterium szulgai: genotypic, phenotypic, and epidemiological analysis. J. Clin. Microbiol. 40:1134-1139.
-
(2002)
J. Clin. Microbiol
, vol.40
, pp. 1134-1139
-
-
Zhang, Q.1
Kennon, R.2
Koza, M.A.3
Hulten, K.4
Clarridge III, J.E.5
|