-
1
-
-
0033771358
-
TCS: A computer program to estimate gene genealogies
-
Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Mol Ecol 9: 1657-1659
-
(2000)
Mol Ecol
, vol.9
, pp. 1657-1659
-
-
Clement, M.1
Posada, D.2
Crandall, K.A.3
-
2
-
-
0031794235
-
Phylogenetic patterns and evolution of the mitochondrial DNA control region in two neotropical cats (Mammalia, Felidae)
-
Eizirik E, Bonatto SL, Johnson WE, Crawshaw Jr PG, Vie JC, Brousset DM, O'Brien SJ, Salzano FM (1998) Phylogenetic patterns and evolution of the mitochondrial DNA control region in two neotropical cats (Mammalia, Felidae). J Mol Evol 47: 613-624
-
(1998)
J Mol Evol
, vol.47
, pp. 613-624
-
-
Eizirik, E.1
Bonatto, S.L.2
Johnson, W.E.3
Crawshaw Jr, P.G.4
Vie, J.C.5
Brousset, D.M.6
O'Brien, S.J.7
Salzano, F.M.8
-
3
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
4
-
-
0027297967
-
Transcribed heteroplasmic repeated sequences in the porcine milochondrial DNA D-loop region
-
Ghivizzani SC, Mackay SLD, Madsen CS, Laipis PJ, Hauswirth WW (1993) Transcribed heteroplasmic repeated sequences in the porcine milochondrial DNA D-loop region. J Mol Evol 37: 36-47
-
(1993)
J Mol Evol
, vol.37
, pp. 36-47
-
-
Ghivizzani, S.C.1
Mackay, S.L.D.2
Madsen, C.S.3
Laipis, P.J.4
Hauswirth, W.W.5
-
5
-
-
0001893436
-
Quasi-continuous variation of the second upper premolar in Felis bengalensis Kerr, 1792 and its significance for some fossil lynxes
-
Glass GE, Todd NB (1977) Quasi-continuous variation of the second upper premolar in Felis bengalensis Kerr, 1792 and its significance for some fossil lynxes. Z Saugetierkd 4: 36-44
-
(1977)
Z Saugetierkd
, vol.4
, pp. 36-44
-
-
Glass, G.E.1
Todd, N.B.2
-
6
-
-
0022376704
-
Dating the human-ape splitting by a molecular clock of mitochondrial DNA
-
Hasegawa M, Kishino H, Yano T (1985) Dating the human-ape splitting by a molecular clock of mitochondrial DNA. J Mol Evol 22: 160-174
-
(1985)
J Mol Evol
, vol.22
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
7
-
-
0025758683
-
Heteroplasmy and polymorphism in the major noncoding region of mitochondrial DNA in Japanese monkeys: Association with tandemly repeated sequences
-
Hayasaka K, Ishida T, Horai S (1991) Heteroplasmy and polymorphism in the major noncoding region of mitochondrial DNA in Japanese monkeys: association with tandemly repeated sequences. Mol Biol Evol 8: 399-415
-
(1991)
Mol Biol Evol
, vol.8
, pp. 399-415
-
-
Hayasaka, K.1
Ishida, T.2
Horai, S.3
-
9
-
-
0040509829
-
A new genus and species of cat from Iriomote, Ryukyu Island
-
Imaizumi Y (1967) A new genus and species of cat from Iriomote, Ryukyu Island. J Mamm Soc Jpn 3: 75-108
-
(1967)
J Mamm Soc Jpn
, vol.3
, pp. 75-108
-
-
Imaizumi, Y.1
-
10
-
-
0346694124
-
Status of conservation and management of two species of Felidae in Japan
-
in Japanese with English abstract
-
Izawa M, Doi T (1991) Status of conservation and management of two species of Felidae in Japan. Honyurui Kagaku [Mammalian Science] 31:15-22 (in Japanese with English abstract)
-
(1991)
Honyurui Kagaku [Mammalian Science]
, vol.31
, pp. 15-22
-
-
Izawa, M.1
Doi, T.2
-
11
-
-
0007495819
-
Ecological study on the two species of Felidae in Japan
-
Ed by N Maruyama, B Bobek, Y Ono, W Regelin, L Bartos, PR Ratcliffe, Sankyo, Tokyo, pp
-
Izawa M, Doi T, Ono Y (1991) Ecological study on the two species of Felidae in Japan. In "Wildlife Conservation" Ed by N Maruyama, B Bobek, Y Ono, W Regelin, L Bartos, PR Ratcliffe, Sankyo, Tokyo, pp 141-143
-
(1991)
Wildlife Conservation
, pp. 141-143
-
-
Izawa, M.1
Doi, T.2
Ono, Y.3
-
12
-
-
1842430943
-
Evolutionary mechanisms involved in the formation of tandem repetitive non-coding DNA
-
Ed by T Riste, D Sherrington, Kluwer Academic Publishing, Netherlands, pp
-
Jakobsen KS, Stacy J, Refseth UH, Thoresen M (1996) Evolutionary mechanisms involved in the formation of tandem repetitive non-coding DNA. In "Physics of Biomaterials: Fluctuations, Selfassembly and Evolution" Ed by T Riste, D Sherrington, Kluwer Academic Publishing, Netherlands, pp 249-261
-
(1996)
Physics of Biomaterials: Fluctuations, Selfassembly and Evolution
, pp. 249-261
-
-
Jakobsen, K.S.1
Stacy, J.2
Refseth, U.H.3
Thoresen, M.4
-
13
-
-
0012521902
-
Molecular genetic characterization of two insular Asian cat species, Bornean bay cat and Iriomote cat
-
Ed by SP Wasser, Kluwer Academic Publishing, Netherlands, pp
-
Johnson WE, Shinyashiki F, Menotti-Raymond M, Driscoll C, Leh C, Sunquist L, Johnston L, Bush M, Wildt D, Yuhki N, O'Brien SJ (1999) Molecular genetic characterization of two insular Asian cat species, Bornean bay cat and Iriomote cat. In "Evolutionary Theory and Processes: Modern Perspectives" Ed by SP Wasser, Kluwer Academic Publishing, Netherlands, pp 224-248
-
(1999)
Evolutionary Theory and Processes: Modern Perspectives
, pp. 224-248
-
-
Johnson, W.E.1
Shinyashiki, F.2
Menotti-Raymond, M.3
Driscoll, C.4
Leh, C.5
Sunquist, L.6
Johnston, L.7
Bush, M.8
Wildt, D.9
Yuhki, N.10
O'Brien, S.J.11
-
14
-
-
30344438542
-
The late Miocene radiation of modern Felidae: A genetic assessment
-
Johnson WE, Eizirik E, Pecon-Slattery J, Murphy WJ, Antunes A, Teeling E, O'Brien SJ (2006) The late Miocene radiation of modern Felidae: a genetic assessment. Science 311: 73-77
-
(2006)
Science
, vol.311
, pp. 73-77
-
-
Johnson, W.E.1
Eizirik, E.2
Pecon-Slattery, J.3
Murphy, W.J.4
Antunes, A.5
Teeling, E.6
O'Brien, S.J.7
-
15
-
-
0040374468
-
Structure and patterns of sequence variation in the mitochondrial DNA control region of the great cats
-
Kim J, Eizirik E, O'Brien SJ, Johnson WE (2001) Structure and patterns of sequence variation in the mitochondrial DNA control region of the great cats. Mitochondrion 14: 279-292
-
(2001)
Mitochondrion
, vol.14
, pp. 279-292
-
-
Kim, J.1
Eizirik, E.2
O'Brien, S.J.3
Johnson, W.E.4
-
16
-
-
0019296687
-
A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
-
Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120
-
(1980)
J Mol Evol
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
17
-
-
0040730492
-
Diving survey of the Kerama Saddle in the eastern margin of the Okinawa Trough: Probable sunken land-bridge during the glacial age
-
in Japanese with English abstract
-
Kimura M, Matsumoto T, Nakamura T, Otsuka H, Nishida S, Aoki M, Ono T, Danno K (1992) Diving survey of the Kerama Saddle in the eastern margin of the Okinawa Trough: Probable sunken land-bridge during the glacial age. Proc JAMSTEC Symp Deep Sea Res, 107-133 (in Japanese with English abstract)
-
(1992)
Proc JAMSTEC Symp Deep Sea Res
, pp. 107-133
-
-
Kimura, M.1
Matsumoto, T.2
Nakamura, T.3
Otsuka, H.4
Nishida, S.5
Aoki, M.6
Ono, T.7
Danno, K.8
-
19
-
-
3242810318
-
MEGA 3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
-
Kumar S, Tamura K, Nei M (2004) MEGA 3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Briefings in Bioinformatics 5: 150-163
-
(2004)
Briefings in Bioinformatics
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
20
-
-
0035540168
-
Low genetic diversity in Japanese populations of the Eurasian badger Meles meles (Mustelidae, Carnivora) revealed by mitochondrial cytochrome b gene sequences
-
Kurose N, Kaneko Y, Abramov AV, Siriaroonrat B, Masuda R (2001) Low genetic diversity in Japanese populations of the Eurasian badger Meles meles (Mustelidae, Carnivora) revealed by mitochondrial cytochrome b gene sequences. Zool Sci 18: 1145-1151
-
(2001)
Zool Sci
, vol.18
, pp. 1145-1151
-
-
Kurose, N.1
Kaneko, Y.2
Abramov, A.V.3
Siriaroonrat, B.4
Masuda, R.5
-
21
-
-
0030001769
-
Complete nucleotide sequences of the domestic cat (Felis catus): Mitochondrial genome and a transposed mtDNA tandem repeat (Numt) in the nuclear genome
-
Lopez JV, Cevario S, O'Brien SJ (1996) Complete nucleotide sequences of the domestic cat (Felis catus): mitochondrial genome and a transposed mtDNA tandem repeat (Numt) in the nuclear genome. Genomics 33: 229-246
-
(1996)
Genomics
, vol.33
, pp. 229-246
-
-
Lopez, J.V.1
Cevario, S.2
O'Brien, S.J.3
-
22
-
-
0032211421
-
Mitochondrial DNA variable number tandem repeats (VNTRs): Utility and problems in molecular ecology
-
Lunt DH, Whipple LE, Hyman BC (1998) Mitochondrial DNA variable number tandem repeats (VNTRs): utility and problems in molecular ecology. Mol Ecol 7: 1441-1455
-
(1998)
Mol Ecol
, vol.7
, pp. 1441-1455
-
-
Lunt, D.H.1
Whipple, L.E.2
Hyman, B.C.3
-
23
-
-
0029383728
-
Two Japanese wildcats, the Tsushima cat and the Iriomote cat, show the same mitochondrial DNA lineage as the leopard cat Felis bengalensis
-
Masuda R, Yoshida MC (1995) Two Japanese wildcats, the Tsushima cat and the Iriomote cat, show the same mitochondrial DNA lineage as the leopard cat Felis bengalensis. Zool Sci 12: 655-659
-
(1995)
Zool Sci
, vol.12
, pp. 655-659
-
-
Masuda, R.1
Yoshida, M.C.2
-
24
-
-
0028483232
-
Molecular phylogenetic status of the Iriomote cat Felis iriomotensis, inferred from mitochondrial DNA sequence analysis
-
Masuda R, Yoshida MC, Shinyashiki F, Bando G (1994) Molecular phylogenetic status of the Iriomote cat Felis iriomotensis, inferred from mitochondrial DNA sequence analysis. Zool Sci 11: 597-604
-
(1994)
Zool Sci
, vol.11
, pp. 597-604
-
-
Masuda, R.1
Yoshida, M.C.2
Shinyashiki, F.3
Bando, G.4
-
25
-
-
0030341925
-
Molecular phylogeny of mitochondrial cytochrome b and 12S rRNA sequences in the Felidae: Ocelot and domestic cat lineages
-
Masuda R, Lopez JV, Pecon-Slattery J, Yuhki N, O'Brien SJ (1996) Molecular phylogeny of mitochondrial cytochrome b and 12S rRNA sequences in the Felidae: Ocelot and domestic cat lineages. Mol Phylogenet Evol 6: 351-365
-
(1996)
Mol Phylogenet Evol
, vol.6
, pp. 351-365
-
-
Masuda, R.1
Lopez, J.V.2
Pecon-Slattery, J.3
Yuhki, N.4
O'Brien, S.J.5
-
26
-
-
0032940104
-
Micoevolution of the mitochondrial DNA control region in the Japanese brown bear (Ursus arctos) population
-
Matsuhashi T, Masuda R, Mano T, Yoshida MC (1999) Micoevolution of the mitochondrial DNA control region in the Japanese brown bear (Ursus arctos) population. Mol Biol Evol 16: 676-684
-
(1999)
Mol Biol Evol
, vol.16
, pp. 676-684
-
-
Matsuhashi, T.1
Masuda, R.2
Mano, T.3
Yoshida, M.C.4
-
27
-
-
0033258298
-
Two genetically lineages of the sika deer, Cervus nippon, in the Japanase islands: Comparison of mitochondrial D-loop region sequences
-
Nagata N, Masuda R, Tamate HB, Hamasaki S, Ochiai K, Asada M, Tatsuzawa S, Suda K, Tado H, Yoshida MC (1999) Two genetically lineages of the sika deer, Cervus nippon, in the Japanase islands: comparison of mitochondrial D-loop region sequences. Mol Phylogenet Evol 13: 511-519
-
(1999)
Mol Phylogenet Evol
, vol.13
, pp. 511-519
-
-
Nagata, N.1
Masuda, R.2
Tamate, H.B.3
Hamasaki, S.4
Ochiai, K.5
Asada, M.6
Tatsuzawa, S.7
Suda, K.8
Tado, H.9
Yoshida, M.C.10
-
29
-
-
0025586669
-
The history of straits around the Japanese islands in the late Quaternary
-
in Japanese with English abstract
-
Ohshima K (1990) The history of straits around the Japanese islands in the late Quaternary. Quatern Res 29: 193-208 (in Japanese with English abstract)
-
(1990)
Quatern Res
, vol.29
, pp. 193-208
-
-
Ohshima, K.1
-
30
-
-
0000177720
-
The late-Quaternary sea-level change of the Japanese Island
-
in Japanese
-
Ohshima K (1991) The late-Quaternary sea-level change of the Japanese Island. J Geogr 100: 967-975 (in Japanese)
-
(1991)
J Geogr
, vol.100
, pp. 967-975
-
-
Ohshima, K.1
-
31
-
-
0031972376
-
Patterns of Y and X chromosome DNA sequence divergence during the Felidae radiation
-
Pecon-Slattery J, O'Brien SJ (1998) Patterns of Y and X chromosome DNA sequence divergence during the Felidae radiation. Genetics 148: 1245-1255
-
(1998)
Genetics
, vol.148
, pp. 1245-1255
-
-
Pecon-Slattery, J.1
O'Brien, S.J.2
-
32
-
-
12944312756
-
Novel gene conversion between X-Y homologues located in the nonrecombining region of the Y chromosome in Felidae (Mammalia)
-
Pecon-Slattery J, Sanner-Watcher L, O'Brien SJ (2000) Novel gene conversion between X-Y homologues located in the nonrecombining region of the Y chromosome in Felidae (Mammalia). Proc Natl Acad Sci USA 97: 5307-5312
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 5307-5312
-
-
Pecon-Slattery, J.1
Sanner-Watcher, L.2
O'Brien, S.J.3
-
33
-
-
8444221611
-
Phylogenetic assessment of introns and SINEs within the Y chromosome using the cat family Felidae as a species tree
-
Pecon-Slattery J, Pearks Wilkerson AJ, Murphy WJ, O'Brien SJ (2004) Phylogenetic assessment of introns and SINEs within the Y chromosome using the cat family Felidae as a species tree. Mol Biol Evol 21: 2299-2309
-
(2004)
Mol Biol Evol
, vol.21
, pp. 2299-2309
-
-
Pecon-Slattery, J.1
Pearks Wilkerson, A.J.2
Murphy, W.J.3
O'Brien, S.J.4
-
34
-
-
0031773680
-
Modeltest: Testing the model of DNA substitution
-
Posada D, Crandall KA (1998) Modeltest: testing the model of DNA substitution. Bioinformatics 14: 817-818
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
35
-
-
0002086307
-
Species conservation and systematics: The dilemma of subspecies
-
Ryder OA (1986) Species conservation and systematics: the dilemma of subspecies. Trends Ecol Evol 1: 9-10
-
(1986)
Trends Ecol Evol
, vol.1
, pp. 9-10
-
-
Ryder, O.A.1
-
36
-
-
0023375195
-
The neighbor-joining method: A new method for reconstracting phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstracting phylogenetic trees. Mol Biol Evol 4: 406-425
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
37
-
-
0001639602
-
Phylogenetic relationships of north American ursids based on analysis of mitochondrial DNA
-
Shield GF, Kocher TD (1991) Phylogenetic relationships of north American ursids based on analysis of mitochondrial DNA. Evoluton 45: 218-221
-
(1991)
Evoluton
, vol.45
, pp. 218-221
-
-
Shield, G.F.1
Kocher, T.D.2
-
38
-
-
0028118402
-
Patterns of sequence variation in the mitochondrial D-loop region of shrews
-
Stewart DT, Baker AJ (1994) Patterns of sequence variation in the mitochondrial D-loop region of shrews. Mol Biol Evol 11: 9-21
-
(1994)
Mol Biol Evol
, vol.11
, pp. 9-21
-
-
Stewart, D.T.1
Baker, A.J.2
-
39
-
-
0028059188
-
Phylogenetic relationship between the Iriomote cat and the leopard cat, Felis bengalensis, based on the ribosomal DNA
-
Suzuki H, Hosoda T, Sakurai S, Tsuchiya K, Munechika I, Korablev VP (1994) Phylogenetic relationship between the Iriomote cat and the leopard cat, Felis bengalensis, based on the ribosomal DNA. Jpn J Genet 69: 397-406
-
(1994)
Jpn J Genet
, vol.69
, pp. 397-406
-
-
Suzuki, H.1
Hosoda, T.2
Sakurai, S.3
Tsuchiya, K.4
Munechika, I.5
Korablev, V.P.6
-
40
-
-
41949137144
-
-
Swofford DL (2001) PAUP*: Phylogenetic Analysis Using Parsimony *and Other Methods, Version 4.0b10, Sinauer Associates, Sunderland, Massachusetts
-
Swofford DL (2001) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4.0b10, Sinauer Associates, Sunderland, Massachusetts
-
-
-
-
41
-
-
22544473637
-
Genetic diversity in domestic cats Felis catus of the Tsushima Islands, based on mitochondrial DNA cytochrome b and control region nucleotide sequences
-
Tamada T, Kurose N, Masuda R (2005) Genetic diversity in domestic cats Felis catus of the Tsushima Islands, based on mitochondrial DNA cytochrome b and control region nucleotide sequences. Zool Sci 22: 627-633
-
(2005)
Zool Sci
, vol.22
, pp. 627-633
-
-
Tamada, T.1
Kurose, N.2
Masuda, R.3
-
42
-
-
0025923821
-
Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material
-
Walsh PS, Metzger DA, Higuchi R (1991) Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. BioTechniques 10: 506-513
-
(1991)
BioTechniques
, vol.10
, pp. 506-513
-
-
Walsh, P.S.1
Metzger, D.A.2
Higuchi, R.3
-
43
-
-
0025899307
-
Length and sequence variation in evening bat D-loop mtDNA
-
Wilkinson GS, Chapman AM (1991) Length and sequence variation in evening bat D-loop mtDNA. Genetics 128: 607-617
-
(1991)
Genetics
, vol.128
, pp. 607-617
-
-
Wilkinson, G.S.1
Chapman, A.M.2
|