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Volumn 45, Issue 5, 2008, Pages 738-748

Gene expression in Fusarium graminearum grown on plant cell wall

Author keywords

Cell wall degrading enzymes; Filamentous fungi; GABA shunt; Gibberella zeae; Humulus lupulus; Microarray; Redox balance; Subtracted cDNA library; Suppressive subtractive hybridization; Transporters

Indexed keywords

4 AMINOBUTYRIC ACID; CELL WALL DEGRADING ENZYME; ENZYME; UNCLASSIFIED DRUG;

EID: 41849084539     PISSN: 10871845     EISSN: 10960937     Source Type: Journal    
DOI: 10.1016/j.fgb.2007.12.002     Document Type: Article
Times cited : (37)

References (54)
  • 1
    • 0032804706 scopus 로고    scopus 로고
    • TRI12, a trichothecene efflux pump from Fusarium sporotrichioides: gene isolation and expression in yeast
    • Alexander N.J., McCormick S.P., and Hohn T.M. TRI12, a trichothecene efflux pump from Fusarium sporotrichioides: gene isolation and expression in yeast. Mol. Gen. Genet. 261 (1999) 977-984
    • (1999) Mol. Gen. Genet. , vol.261 , pp. 977-984
    • Alexander, N.J.1    McCormick, S.P.2    Hohn, T.M.3
  • 3
    • 0014739411 scopus 로고
    • The operation of the gamma-aminobutyrate bypath of the tricarboxylic acid cycle in brain tissue in vitro
    • Balazs R., Machiyama Y., Hammond B.J., Julian T., and Richter D. The operation of the gamma-aminobutyrate bypath of the tricarboxylic acid cycle in brain tissue in vitro. Biochem. J. 116 (1970) 445-461
    • (1970) Biochem. J. , vol.116 , pp. 445-461
    • Balazs, R.1    Machiyama, Y.2    Hammond, B.J.3    Julian, T.4    Richter, D.5
  • 4
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical. and powerful approach to multiple testing
    • Benjamini Y., and Hochberg Y. Controlling the false discovery rate: a practical. and powerful approach to multiple testing. J. R. Stat. Soc. Ser. B 57 (1995) 289-300
    • (1995) J. R. Stat. Soc. Ser. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 5
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad B.M., Irizarry R.A., Astrand M., and Speed T.P. A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19 (2003) 185-193
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 7
    • 0035808386 scopus 로고    scopus 로고
    • Expression of a glutamate decarboxylase homologue is required for normal oxidative stress tolerance in Saccharomyces cerevisiae
    • Coleman S.T., Fang T.K., Rovinsky S.A., Turano F.J., and Moye-Rowley W.S. Expression of a glutamate decarboxylase homologue is required for normal oxidative stress tolerance in Saccharomyces cerevisiae. J. Biol. Chem. 276 (2001) 244-250
    • (2001) J. Biol. Chem. , vol.276 , pp. 244-250
    • Coleman, S.T.1    Fang, T.K.2    Rovinsky, S.A.3    Turano, F.J.4    Moye-Rowley, W.S.5
  • 8
    • 34547536371 scopus 로고    scopus 로고
    • Natural products that have been used commercially as crop protection agents
    • Copping L.G., and Duke S.O. Natural products that have been used commercially as crop protection agents. Pest. Manag. Sci. 63 (2007) 524-554
    • (2007) Pest. Manag. Sci. , vol.63 , pp. 524-554
    • Copping, L.G.1    Duke, S.O.2
  • 9
    • 0001973467 scopus 로고    scopus 로고
    • Carbohydrate-active enzymes: an integrated database approach
    • Gilbert H.J., Davies G., Henrissat B., and Svensson B. (Eds), The Royal Society of Chemistry, Cambridge 3-12
    • Coutinho P.M., and Henrissat B. Carbohydrate-active enzymes: an integrated database approach. In: Gilbert H.J., Davies G., Henrissat B., and Svensson B. (Eds). Recent Advances in Carbohydrate Bioengineering (1999), The Royal Society of Chemistry, Cambridge 3-12
    • (1999) Recent Advances in Carbohydrate Bioengineering
    • Coutinho, P.M.1    Henrissat, B.2
  • 10
    • 14844322366 scopus 로고    scopus 로고
    • Metal ions modulate gene expression and accumulation of the mycotoxins aflatoxin and zearalenone
    • Cuero R., and Ouellet T. Metal ions modulate gene expression and accumulation of the mycotoxins aflatoxin and zearalenone. J. Appl. Microbiol. 98 (2005) 598-605
    • (2005) J. Appl. Microbiol. , vol.98 , pp. 598-605
    • Cuero, R.1    Ouellet, T.2
  • 12
    • 33644966287 scopus 로고    scopus 로고
    • Global carbon utilization profiles of wild-type, mutant, and transformant strains of Hypocrea jecorina
    • Druzhinina I.S., Schmoll M., Seiboth B., and Kubicek C.P. Global carbon utilization profiles of wild-type, mutant, and transformant strains of Hypocrea jecorina. Appl. Environ. Microbiol. 72 (2006) 2126-2133
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 2126-2133
    • Druzhinina, I.S.1    Schmoll, M.2    Seiboth, B.3    Kubicek, C.P.4
  • 13
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred I. Accuracy assessment
    • Ewing B., Hillier L., Wendl M.C., and Green P. Base-calling of automated sequencer traces using phred I. Accuracy assessment. Genome Res. 8 (1998) 175-185
    • (1998) Genome Res. , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 14
    • 33745252555 scopus 로고    scopus 로고
    • Genomic analysis of host-pathogen interaction between Fusarium graminearum and wheat during early stages of disease development
    • Goswami R.S., Xu J.-R., Trail F., Hilburn K., and Kistler H.C. Genomic analysis of host-pathogen interaction between Fusarium graminearum and wheat during early stages of disease development. Microbiology 152 (2006) 1877-1890
    • (2006) Microbiology , vol.152 , pp. 1877-1890
    • Goswami, R.S.1    Xu, J.-R.2    Trail, F.3    Hilburn, K.4    Kistler, H.C.5
  • 18
    • 34948868269 scopus 로고    scopus 로고
    • Gene expression shifts during perithecium development in Gibberella zeae (anamorph Fusarium graminearum), with particular emphasis on ion transport protein
    • Hallen H.E., Huebner M., Shiu S.-H., Guldener U., and Trail F. Gene expression shifts during perithecium development in Gibberella zeae (anamorph Fusarium graminearum), with particular emphasis on ion transport protein. Fungal Genet. Biol. 44 (2007) 1146-1156
    • (2007) Fungal Genet. Biol. , vol.44 , pp. 1146-1156
    • Hallen, H.E.1    Huebner, M.2    Shiu, S.-H.3    Guldener, U.4    Trail, F.5
  • 19
    • 0037031141 scopus 로고    scopus 로고
    • Development of a bipartite method for Fusarium identification based on cellobiohydrolase-C: CAPS and Western blot analysis
    • Hatsch D., Phalip V., and Jeltsch J.-M. Development of a bipartite method for Fusarium identification based on cellobiohydrolase-C: CAPS and Western blot analysis. FEMS Microbiol. Lett. 213 (2002) 245-249
    • (2002) FEMS Microbiol. Lett. , vol.213 , pp. 245-249
    • Hatsch, D.1    Phalip, V.2    Jeltsch, J.-M.3
  • 20
    • 33746527602 scopus 로고    scopus 로고
    • Fusarium graminearum on plant cell wall: no fewer than 30 xylanase genes transcribed
    • Hatsch D., Phalip V., Petkovski E., and Jeltsch J.-M. Fusarium graminearum on plant cell wall: no fewer than 30 xylanase genes transcribed. Biochem. Biophys. Res. Commun. 345 (2006) 959-966
    • (2006) Biochem. Biophys. Res. Commun. , vol.345 , pp. 959-966
    • Hatsch, D.1    Phalip, V.2    Petkovski, E.3    Jeltsch, J.-M.4
  • 21
    • 0027787581 scopus 로고
    • The pre-chorismate (shikimate) and quinate pathways in filamentous fungi: theoretical and practical aspects
    • Hawkins A., Lamb H., Moore J., Charles I., and Roberts C. The pre-chorismate (shikimate) and quinate pathways in filamentous fungi: theoretical and practical aspects. J. Gen. Microbiol. 139 (1993) 2891-2899
    • (1993) J. Gen. Microbiol. , vol.139 , pp. 2891-2899
    • Hawkins, A.1    Lamb, H.2    Moore, J.3    Charles, I.4    Roberts, C.5
  • 22
    • 0036754265 scopus 로고    scopus 로고
    • Studies on the infection process of Fusarium culmorum in wheat spikes: degradation of host cell wall components and localization of trichothecene toxins in infected tissue
    • Kang Z., and Buchenauer H. Studies on the infection process of Fusarium culmorum in wheat spikes: degradation of host cell wall components and localization of trichothecene toxins in infected tissue. Eur. J. Plant Pathol. 108 (2002) 653-660
    • (2002) Eur. J. Plant Pathol. , vol.108 , pp. 653-660
    • Kang, Z.1    Buchenauer, H.2
  • 23
    • 0035991175 scopus 로고    scopus 로고
    • Functional and comparative bioinformatic analysis of expressed genes from wheat spikes infected with Fusarium graminearum
    • Kruger W.M., Pritsch C., Chao S., and Muehlbauer G.J. Functional and comparative bioinformatic analysis of expressed genes from wheat spikes infected with Fusarium graminearum. Mol. Plant-Microbe Interact. 15 (2002) 445-455
    • (2002) Mol. Plant-Microbe Interact. , vol.15 , pp. 445-455
    • Kruger, W.M.1    Pritsch, C.2    Chao, S.3    Muehlbauer, G.J.4
  • 24
    • 0031421691 scopus 로고    scopus 로고
    • The metabolism of 4-aminobutyrate (GABA) in fungi
    • Kumar S., and Punekar N.S. The metabolism of 4-aminobutyrate (GABA) in fungi. Mycol. Res. 101 (1997) 403-409
    • (1997) Mycol. Res. , vol.101 , pp. 403-409
    • Kumar, S.1    Punekar, N.S.2
  • 25
    • 0034607152 scopus 로고    scopus 로고
    • Metabolic fate of glutamate and evaluation of flux through the 4-aminobutyrate (GABA) shunt in Aspergillus niger
    • Kumar S., Punekar N.S., SatyaNarayan V., and Venkatesh K.V. Metabolic fate of glutamate and evaluation of flux through the 4-aminobutyrate (GABA) shunt in Aspergillus niger. Biotechnol. Bioeng. 67 (1999) 575-584
    • (1999) Biotechnol. Bioeng. , vol.67 , pp. 575-584
    • Kumar, S.1    Punekar, N.S.2    SatyaNarayan, V.3    Venkatesh, K.V.4
  • 26
    • 33645859608 scopus 로고    scopus 로고
    • Identification of the down-regulated genes in a mat1-2-deleted strain of Gibberella zeae, using cDNA subtraction and microarray analysis
    • Lee S.-H., Lee S., Choi D., Lee Y.-W., and Yun S.-H. Identification of the down-regulated genes in a mat1-2-deleted strain of Gibberella zeae, using cDNA subtraction and microarray analysis. Fungal Genet. Biol. 43 (2006) 295-310
    • (2006) Fungal Genet. Biol. , vol.43 , pp. 295-310
    • Lee, S.-H.1    Lee, S.2    Choi, D.3    Lee, Y.-W.4    Yun, S.-H.5
  • 27
    • 3042698671 scopus 로고    scopus 로고
    • Comparison of infection with Fusarium head blight and accumulation of mycotoxins in grain of hulless and covered barley
    • Legzdina L., and Buersmayr H. Comparison of infection with Fusarium head blight and accumulation of mycotoxins in grain of hulless and covered barley. J. Cereal. Sci. 40 (2004) 61-67
    • (2004) J. Cereal. Sci. , vol.40 , pp. 61-67
    • Legzdina, L.1    Buersmayr, H.2
  • 30
    • 0031034203 scopus 로고    scopus 로고
    • The phytase subfamily of histidine acid phosphatases: isolation of genes for two novel phytases from the fungi Aspergillus terreus and Myceliophthora thermophila
    • Mitchell D.B., Vogel K., Weimann B.J., Pasamontes L., and van Loon A.P. The phytase subfamily of histidine acid phosphatases: isolation of genes for two novel phytases from the fungi Aspergillus terreus and Myceliophthora thermophila. Microbiology 143 (1997) 245-252
    • (1997) Microbiology , vol.143 , pp. 245-252
    • Mitchell, D.B.1    Vogel, K.2    Weimann, B.J.3    Pasamontes, L.4    van Loon, A.P.5
  • 31
    • 0242406968 scopus 로고    scopus 로고
    • Cultural and genetic approaches to managing mycotoxins in maize
    • Munkvold G.P. Cultural and genetic approaches to managing mycotoxins in maize. Annu. Rev. Phytopathol. 41 (2003) 99-116
    • (2003) Annu. Rev. Phytopathol. , vol.41 , pp. 99-116
    • Munkvold, G.P.1
  • 32
    • 17044431052 scopus 로고    scopus 로고
    • An oligonucleotide microarray for the identification and differentiation of trichothecene producing and non-producing Fusarium species occurring on cereal grain
    • Nicolaisen M., Justesen A.F., Thrane U., Skouboe P., and Holmstrom K. An oligonucleotide microarray for the identification and differentiation of trichothecene producing and non-producing Fusarium species occurring on cereal grain. J. Microbiol. Meth. 62 (2005) 57-69
    • (2005) J. Microbiol. Meth. , vol.62 , pp. 57-69
    • Nicolaisen, M.1    Justesen, A.F.2    Thrane, U.3    Skouboe, P.4    Holmstrom, K.5
  • 35
    • 1642266674 scopus 로고    scopus 로고
    • Application of a yeast method for DNA extraction associated with database interrogations for the characterization of various filamentous fungi from diseased hop
    • Phalip V., Hatsch D., and Jeltsch J.-M. Application of a yeast method for DNA extraction associated with database interrogations for the characterization of various filamentous fungi from diseased hop. Biotechnol. Lett. 26 (2004) 409-413
    • (2004) Biotechnol. Lett. , vol.26 , pp. 409-413
    • Phalip, V.1    Hatsch, D.2    Jeltsch, J.-M.3
  • 37
    • 0034129325 scopus 로고    scopus 로고
    • Toxigenic fungi and mycotoxins
    • Pitt J.I. Toxigenic fungi and mycotoxins. Br. Med. Bull. 56 (2000) 184-192
    • (2000) Br. Med. Bull. , vol.56 , pp. 184-192
    • Pitt, J.I.1
  • 39
    • 33745334567 scopus 로고    scopus 로고
    • Microarray analysis of transcript accumulation during perithecium development in the filamentous fungus Gibberella zeae (anamorph Fusarium graminearum)
    • Qi W., Kwon C., and Trail F. Microarray analysis of transcript accumulation during perithecium development in the filamentous fungus Gibberella zeae (anamorph Fusarium graminearum). Mol. Genet. Genom. 276 (2006) 87-100
    • (2006) Mol. Genet. Genom. , vol.276 , pp. 87-100
    • Qi, W.1    Kwon, C.2    Trail, F.3
  • 41
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • Schena M., Shalon D., Davis R.W., and Brown P.O. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270 (1995) 467-470
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 42
    • 20844450604 scopus 로고    scopus 로고
    • Random insertional mutagenesis identifies genes associated with virulence in the wheat scab fungus Fusarium graminearum
    • Seong K., Hou Z., Tracy M., Kistler C., and Xu J.-R. Random insertional mutagenesis identifies genes associated with virulence in the wheat scab fungus Fusarium graminearum. Phytopathology 98 (2005) 744-750
    • (2005) Phytopathology , vol.98 , pp. 744-750
    • Seong, K.1    Hou, Z.2    Tracy, M.3    Kistler, C.4    Xu, J.-R.5
  • 43
    • 33947380509 scopus 로고    scopus 로고
    • Biofuel researchers prepare to reap a new harvest
    • Service R. Biofuel researchers prepare to reap a new harvest. Science 315 (2007) 1488-1491
    • (2007) Science , vol.315 , pp. 1488-1491
    • Service, R.1
  • 44
    • 0032731314 scopus 로고    scopus 로고
    • Metabolism and functions of gamma-aminobutyric acid
    • Shelp B.J., Bown A.W., and McLean M.D. Metabolism and functions of gamma-aminobutyric acid. Trends Plant Sci. 4 (1999) 446-452
    • (1999) Trends Plant Sci. , vol.4 , pp. 446-452
    • Shelp, B.J.1    Bown, A.W.2    McLean, M.D.3
  • 45
    • 33845679465 scopus 로고    scopus 로고
    • Extracellular gamma-aminobutyrate mediates communication between plants and other organisms
    • Shelp B.J., Bown A.W., and Faure D. Extracellular gamma-aminobutyrate mediates communication between plants and other organisms. Plant Physiol. 142 (2006) 1350-1352
    • (2006) Plant Physiol. , vol.142 , pp. 1350-1352
    • Shelp, B.J.1    Bown, A.W.2    Faure, D.3
  • 46
    • 0019887799 scopus 로고
    • Identification of common molecular subsequences
    • Smith T.F., and Waterman M.S. Identification of common molecular subsequences. J. Mol. Biol. 147 (1981) 195-197
    • (1981) J. Mol. Biol. , vol.147 , pp. 195-197
    • Smith, T.F.1    Waterman, M.S.2
  • 47
    • 0028830815 scopus 로고
    • Calcium/calmodulin activation of soybean glutamate decarboxylase
    • Snedden W.A., Arazi T., Fromm H., and Shelp B.J. Calcium/calmodulin activation of soybean glutamate decarboxylase. Plant Physiol. 108 (1995) 543-549
    • (1995) Plant Physiol. , vol.108 , pp. 543-549
    • Snedden, W.A.1    Arazi, T.2    Fromm, H.3    Shelp, B.J.4
  • 48
    • 0030060208 scopus 로고    scopus 로고
    • Activation of a recombinant petunia glutamate decarboxylase by calcium/calmodulin or by a monoclonal antibody which recognizes the calmodulin binding domain
    • Snedden W.A., Koutsia N., Baum G., and Fromm H. Activation of a recombinant petunia glutamate decarboxylase by calcium/calmodulin or by a monoclonal antibody which recognizes the calmodulin binding domain. J. Biol. Chem. 271 (1996) 4148-4153
    • (1996) J. Biol. Chem. , vol.271 , pp. 4148-4153
    • Snedden, W.A.1    Koutsia, N.2    Baum, G.3    Fromm, H.4
  • 49
    • 0036943715 scopus 로고    scopus 로고
    • Evidence that Cladosporium fulvum metabolises g-aminobutyric acid during infection of tomato
    • Solomon P.S., and Oliver R.P. Evidence that Cladosporium fulvum metabolises g-aminobutyric acid during infection of tomato. Planta 214 (2001) 414-420
    • (2001) Planta , vol.214 , pp. 414-420
    • Solomon, P.S.1    Oliver, R.P.2
  • 50
    • 0029328547 scopus 로고
    • Characterization and disruption of a gene in the maize pathogen Cochliobolus carbonum encoding a cellulase lacking a cellulose binding domain and hinge region
    • Sposato P., Ahn J., and Walton J. Characterization and disruption of a gene in the maize pathogen Cochliobolus carbonum encoding a cellulase lacking a cellulose binding domain and hinge region. Mol. Plant-Microbe Interact. 8 (1995) 602-609
    • (1995) Mol. Plant-Microbe Interact. , vol.8 , pp. 602-609
    • Sposato, P.1    Ahn, J.2    Walton, J.3
  • 52
    • 0036210191 scopus 로고    scopus 로고
    • Biotechnology of microbial xylanases: enzymology, molecular biology, and application
    • Subramaniyan S., and Prema P. Biotechnology of microbial xylanases: enzymology, molecular biology, and application. Crit. Rev. Biotechnol. 22 (2002) 33-64
    • (2002) Crit. Rev. Biotechnol. , vol.22 , pp. 33-64
    • Subramaniyan, S.1    Prema, P.2
  • 53
    • 0037373694 scopus 로고    scopus 로고
    • Analysis of expressed sequence tags from Gibberella zeae (anamorph Fusarium graminearum)
    • Trail F., Xu J.R., San Miguel P., Halgren R.G., and Kistler H.C. Analysis of expressed sequence tags from Gibberella zeae (anamorph Fusarium graminearum). Fungal Genet. Biol. 38 (2003) 187-197
    • (2003) Fungal Genet. Biol. , vol.38 , pp. 187-197
    • Trail, F.1    Xu, J.R.2    San Miguel, P.3    Halgren, R.G.4    Kistler, H.C.5
  • 54
    • 0036954561 scopus 로고    scopus 로고
    • Arabidopsis is susceptible to the cereal ear blight fungal pathogens Fusarium graminearum and Fusarium culmorum
    • Urban M., Daniels S., Mott E., and Hammond-Kosack K. Arabidopsis is susceptible to the cereal ear blight fungal pathogens Fusarium graminearum and Fusarium culmorum. Plant J. 32 (2002) 961-973
    • (2002) Plant J. , vol.32 , pp. 961-973
    • Urban, M.1    Daniels, S.2    Mott, E.3    Hammond-Kosack, K.4


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