Identification of differentially expressed genes in fragrant rose Jinyindao with suppressive subtraction hybridization

Scientia Horticulturae

Volumn 116, Issue 3, 2008, Pages 318-323

  Jirong, Xie ^a   Yunhai, Xiong ^a   Guolu, Liang ^b   Zaiquan, Cheng ^c   Kaixue, Tang ^c   Xingqi, Huang ^c  

^a CHONGQING UNIVERSITY OF ARTS AND SCIENCES   (China)

^b SOUTHWEST UNIVERSITY   (China)

^c INSTITUTE OF MEDICINAL PLANTS   (China)

Author keywords

Floral scent gene ESTs; Floral scent mutant; Rosa hybrida; Suppressive subtraction hybridization

Indexed keywords

ARRAY; GENE EXPRESSION; HERB; HYBRIDIZATION; IDENTIFICATION METHOD; METABOLISM; MUTATION;

ROSA HYBRID CULTIVAR;

EID: 41649090941     PISSN: 03044238     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.scienta.2008.02.012     Document Type: Article

References (15)

1. Bergougnoux V., Caissard J.C., Jullien F., Magnard J.L., Scalliet G., Cock J.M., Hugueney P., and Baudino S. Both the adaxial and abaxial epidermal layers of the rose petal emit volatile scent compounds. Planta 226 4 (2007) 853-866
2. Channeliere S., Riviere S., Scalliet G., Jullien F., Szecsi J., Dolle C., Vergne P., Dumas C., Bendahmane M., Hugueney P., and Cock J.M. Analysis of gene expression in rose petals using expressed sequence tags. FEBS Lett. 515 (2002) 35-38
3. Diatchenko L., Lukyanov S., Lau Y.F., Chenchik A., Moqadam F., Huang B., Lukyanov S., Lukyanov K., Gurskaya N., Sverdlov E.D., and Siebert P.D. Suppression subtractive hybridization: a versatile method for identifying differentially expressed genes. Methods Enzymol. 303 2 (1999) 349-380
4. Flament I., Debonneville C., and Furrer A. Volatile constituents of roses: characterization of cultivars based on the headspace analysis of living flower emissions. In: Teranishi R., Buttery R.G., and Sugisawa H. (Eds). Bioactive Volatile Compounds from Plants (1993), American Chemical Society, Washington, DC 269-281
5. Guterman I., Shalit M., Menda N., Piestun D., Dafny-Yelin M., Shalev G., Bar E., Davydov O., Ovadis M., Emanuel M., Wang J., Adam Z., Pichersky E., Lewinsohn E., Zamir D., Vainstein A., and Weiss D. Rose scent, genomics approach to discovering novel floral fragrance-related genes. Plant Cell 14 12 (2002) 2325-2338
6. Havard J. In: Sheng X.Y. (Ed). Basic DNA and RNA Protocols (2002), Science Press, Beijing 179 (in Chinese)
7. Hubank M., and Schatz D.G. Identifying differences in mRNA expression by representational difference analysis of cDNA. Nucleic Acids Res. 22 (1994) 5640-5648
8. Lavid N., Wang J., Shalit M., Gutterman I., Bar E., Beuerle T., Weiss D., Menda N., Sharfir S., Zamir D., Adam Z., Vainstein A., Pichersky E., and Lewinsohn E. O-methyltransferases involved in the biosynthesis of volatile phenolic derivatives in rose petals. Plant Physiol. 129 4 (2002) 1899-1907
9. Sablowski R.W., Moyano E., Culianez-Macia F.A., Schuch W., Martin C., and Bevan M. Flower-specific myb protein activates transcription of phenylpropanoid biosynthetic genes. EMBO J. 13 1 (1994) 128-137
10. Scalliet G., Journot N., Jullien F., Baudino S., Magnard J.L., Channeliere S., Vergne P., Dumas C., Bendahmane M., Cock J.M., and Hugueney P. Biosynthesis of the major scent components 3,5-dimethoxytoluene and 1,3,5-trimethoxybenzene by novel rose O-methyltransferases. J. Exp. Bot. 57 11 (2006) 2763-2773
11. Shalit M., Guterman I., Volpin H., Bar E., Tamari T., Menda N., Adam Z., Zamir D., Vainstein A., Weiss D., Pichersky E., and Lewinsohn. Volatile ester formation in roses. Identification of an acetyl-coenzyme A. Geraniol/Citronellol acetyltransferase in developing rose petals. Plant Physiol. 131 4 (2003) 1868-1876
12. Uimari A., and Strommer J. Myb26: a MYB-like protein of pea flowers with affinity for promoters of phenylpropanoid genes. Plant J. 12 6 (1997) 1273-1284
13. Yang C.P., Jiang J., Na D.C., and Wei Z.D. Rapid extracting RNA from stamen tissue of White Birth. J. Northeast For. Univ. 30 3 (2002) 1-4 (in Chinese)
14. Yang G.P., Ross D.T., Kang W.W., Brown P.O., and Weigel R.J. Combining SSH and cDNA microarrays for rapid identification of differentially expressed genes. Nucleic Acids Res. 27 (1999) 1517-1523
15. Zuker A., Tzfira T., Ben-Meir H., Ovadis M., Shklarman E., Itzhaki E., Forkmann G., Martens S., Neta-Sharir I., Weiss D., and Vainstein1 A. Modification of flower color and fragrance by antisense suppression of the flavanone 3-hydroxylase gene. Mol. Breeding 9 1 (2002) 33-41