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Volumn 9, Issue , 2008, Pages

A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data

Author keywords

[No Author keywords available]

Indexed keywords

BIOLOGICAL INTERACTIONS; COLLECTIVE SYNCHRONIZATION; COUPLED OSCILLATORS; EVALUATION EXPERIMENTS; GENE EXPRESSION DATA; GENE EXPRESSION PATTERNS; PHASE SYNCHRONIZATION; TRADITIONAL CLUSTERING;

EID: 41449102833     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-9-56     Document Type: Article
Times cited : (17)

References (27)
  • 1
    • 0019503177 scopus 로고
    • Cell-cycle regulation of yeast histone mRNA
    • 10.1016/0092-8674(81)90326-3 7016339
    • Hereford LM Osley MA Ludwig TRD McLaughlin CS Cell-cycle regulation of yeast histone mRNA Cell 1981, 24:367-375. 10.1016/0092-8674(81)90326-3 7016339
    • (1981) Cell , vol.24 , pp. 367-375
    • Hereford, L.M.1    Osley, M.A.2    Ludwig, T.R.D.3    McLaughlin, C.S.4
  • 3
    • 0034671792 scopus 로고    scopus 로고
    • Global analysis of the genetic network controlling a bacterial cell cycle
    • 10.1126/science.290.5499.2144 11118148
    • Laub MT McAdams HH Feldblyum T Fraser CM Shapiro L Global analysis of the genetic network controlling a bacterial cell cycle Science 2000, 290:2144-2148. 10.1126/science.290.5499.2144 11118148
    • (2000) Science , vol.290 , pp. 2144-2148
    • Laub, M.T.1    McAdams, H.H.2    Feldblyum, T.3    Fraser, C.M.4    Shapiro, L.5
  • 4
    • 0035999895 scopus 로고    scopus 로고
    • Synchronous Arabidopsis suspension cultures for analysis of cell-cycle gene activity
    • 10.1046/j.1365-313X.2002.01274.x 12000456
    • Menges M Murray JA Synchronous Arabidopsis suspension cultures for analysis of cell-cycle gene activity Plant J 2002, 30:203-212. 10.1046/ j.1365-313X.2002.01274.x 12000456
    • (2002) Plant J , vol.30 , pp. 203-212
    • Menges, M.1    Murray, J.A.2
  • 5
    • 0036829989 scopus 로고    scopus 로고
    • Cell cycle-regulated gene expression in Arabidopsis
    • 10.1074/jbc.M207570200 12169696
    • Menges M Hennig L Gruissem W Murray JA Cell cycle-regulated gene expression in Arabidopsis J Biol Chem 2002, 277:41987-42002. 10.1074/ jbc.M207570200 12169696
    • (2002) J Biol Chem , vol.277 , pp. 41987-42002
    • Menges, M.1    Hennig, L.2    Gruissem, W.3    Murray, J.A.4
  • 7
    • 0036606417 scopus 로고    scopus 로고
    • Gene profiling of cell cycle progression through S-phase reveals sequential expression of genes required for DNA replication and nucleosome assembly
    • 12036939
    • van der Meijden CM Lapointe DS Luong MX Peric-Hupkes D Cho B Stein JL van Wijnen AJ Stein GS Gene profiling of cell cycle progression through S-phase reveals sequential expression of genes required for DNA replication and nucleosome assembly Cancer Res 2002, 62:3233-3243. 12036939
    • (2002) Cancer Res , vol.62 , pp. 3233-3243
    • van der Meijden, C.M.1    Lapointe, D.S.2    Luong, M.X.3    Peric-Hupkes, D.4    Cho, B.5    Stein, J.L.6    van Wijnen, A.J.7    Stein, G.S.8
  • 9
    • 2442555885 scopus 로고    scopus 로고
    • Microarray analysis of gene expression during the cell cycle
    • 239863 14577836 10.1186/1475-9268-2-1
    • Cooper S Shedden K Microarray analysis of gene expression during the cell cycle Cell & Chromosome 2003, 2:1. 239863 14577836 10.1186/ 1475-9268-2-1
    • (2003) Cell & Chromosome , vol.2 , pp. 1
    • Cooper, S.1    Shedden, K.2
  • 12
    • 4243262725 scopus 로고    scopus 로고
    • Phase Synchronization of Chaotic Oscillators
    • 10.1103/PhysRevLett.76.1804 10060525
    • Rosenblum MG Pikovsky AS Kurths J Phase Synchronization of Chaotic Oscillators Phys Rev Lett 1996, 76:1804-1807. 10.1103/ PhysRevLett.76.1804 10060525
    • (1996) Phys Rev Lett , vol.76 , pp. 1804-1807
    • Rosenblum, M.G.1    Pikovsky, A.S.2    Kurths, J.3
  • 14
    • 2642666488 scopus 로고    scopus 로고
    • Heartbeat synchronized with ventilation
    • 10.1038/32567 9521318
    • Schäfer C Rosenblum MG Kurths J Abel HH Heartbeat synchronized with ventilation Nature 1998, 392:239-240. 10.1038/32567 9521318
    • (1998) Nature , vol.392 , pp. 239-240
    • Schäfer, C.1    Rosenblum, M.G.2    Kurths, J.3    Abel, H.H.4
  • 15
    • 0034310591 scopus 로고    scopus 로고
    • Reversible transitions between synchronization states of the cardiorespiratory system
    • 10.1103/PhysRevLett.85.4831 11082663
    • Stefanovska A Haken H McClintock PVE Hozic M Bajrovic F Ribaric S Reversible transitions between synchronization states of the cardiorespiratory system Phys Rev Lett 2000, 85:4831-4834. 10.1103/ PhysRevLett.85.4831 11082663
    • (2000) Phys Rev Lett , vol.85 , pp. 4831-4834
    • Stefanovska, A.1    Haken, H.2    McClintock, P.V.E.3    Hozic, M.4    Bajrovic, F.5    Ribaric, S.6
  • 17
    • 13244294808 scopus 로고    scopus 로고
    • An approach to multivariate phase synchronization analysis and its application to event-related potentials
    • 10.1142/S0218127404009521
    • Allefeld C Kurths J An approach to multivariate phase synchronization analysis and its application to event-related potentials Int J Bifurcation and Chaos 2004, 14:417-426. 10.1142/S0218127404009521
    • (2004) Int J Bifurcation and Chaos , vol.14 , pp. 417-426
    • Allefeld, C.1    Kurths, J.2
  • 18
    • 0035682819 scopus 로고    scopus 로고
    • Reduced degree of long-range phase synchrony in pathological human brain
    • Bhattacharya J Reduced degree of long-range phase synchrony in pathological human brain Acta Neurobiol Exp 2001, 61:309-318.
    • (2001) Acta Neurobiol Exp , vol.61 , pp. 309-318
    • Bhattacharya, J.1
  • 20
    • 0034300367 scopus 로고    scopus 로고
    • Mean phase coherence as a measure for phase synchronization and its application to EEG of epilepsy patients
    • 10.1016/S0167-2789(00)00087-7
    • Mormann F Lehnertz K David P Elger CE Mean phase coherence as a measure for phase synchronization and its application to EEG of epilepsy patients Physica D 2000, 144:358-369. 10.1016/S0167-2789(00)00087-7
    • (2000) Physica D , vol.144 , pp. 358-369
    • Mormann, F.1    Lehnertz, K.2    David, P.3    Elger, C.E.4
  • 21
    • 0033609387 scopus 로고    scopus 로고
    • Complex dynamics and phase synchronization in spatially extended ecological systems
    • 10.1038/20676 10360572
    • Blasius B Huppert A Stone L Complex dynamics and phase synchronization in spatially extended ecological systems Nature 1999, 399:354-359. 10.1038/20676 10360572
    • (1999) Nature , vol.399 , pp. 354-359
    • Blasius, B.1    Huppert, A.2    Stone, L.3
  • 22
    • 0013417727 scopus 로고    scopus 로고
    • Synchronization experiments with an atmospheric global circulation model
    • 10.1063/1.1338127 12779439
    • Lunkeit F Synchronization experiments with an atmospheric global circulation model Chaos 2001, 11:47-51. 10.1063/1.1338127 12779439
    • (2001) Chaos , vol.11 , pp. 47-51
    • Lunkeit, F.1
  • 23
    • 0039592729 scopus 로고    scopus 로고
    • From Kuramoto to Crawford: Exploring the onset of synchronization in populations of coupled oscillators
    • 10.1016/S0167-2789(00)00094-4
    • Strogatz SH From Kuramoto to Crawford: Exploring the onset of synchronization in populations of coupled oscillators Physica D 2000, 143:1-20. 10.1016/S0167-2789(00)00094-4
    • (2000) Physica D , vol.143 , pp. 1-20
    • Strogatz, S.H.1
  • 25
    • 84886759988 scopus 로고    scopus 로고
    • BioGRID: General Repository for Interaction Datasets http://www.thebiogrid.org
  • 26
    • 37649031501 scopus 로고    scopus 로고
    • Network synchronization, diffusion, and the paradox of heterogeneity
    • 10.1103/PhysRevE.71.016116
    • Motter AE Zhou C Kurths J Network synchronization, diffusion, and the paradox of heterogeneity Physical Review E 2005, 71:016116. 10.1103/ PhysRevE.71.016116
    • (2005) Physical Review E , vol.71 , pp. 016116
    • Motter, A.E.1    Zhou, C.2    Kurths, J.3
  • 27
    • 0032634932 scopus 로고    scopus 로고
    • Computing the discrete-time "analytic" signal via FFT
    • 10.1109/78.782222
    • Marple SL Jr Computing the discrete-time "analytic"signal via FFT IEEE trans Signal processing 1999, 47:2600-2603. 10.1109/78.782222
    • (1999) IEEE Trans Signal Processing , vol.47 , pp. 2600-2603
    • Marple Jr., S.L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.