Assimilation of CO2 by soil microorganisms and transformation into soil organic matter

Organic Geochemistry

Volumn 35, Issue 9, 2004, Pages 1015-1024

  Miltner, Anja ^a   Richnow, Hans Hermann ^a   Kopinke, Frank Dieter ^a   Kästner, Matthias ^a  

^a HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH UFZ   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

SOIL MICROORGANISMS; SOIL ORGANIC MATTER;

CARBON DIOXIDE; MICROORGANISMS; POLLUTION;

SOILS;

CARBON DIOXIDE; ORGANIC GEOCHEMISTRY; SOIL CHEMISTRY; SOIL MICROORGANISM; SOIL ORGANIC MATTER;

EID: 4143050494     PISSN: 01466380     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.orggeochem.2004.05.001     Document Type: Article

References (29)

1. 13C natural abundance. Boutton T.W, Yamasaki S.-i. Mass Spectrometry of Soils. 1996;83-111 Marcel Dekker, New York
2. Bligh E.G, Dyer W.J. A rapid method of total lipid extraction and purification. Canadian Journal of Biochemistry and Physiology. 37:1959;911-917
3. Burauel P, Führ F. Formation and long-term fate of non-extractable residues in outdoor lysimeter studies. Environmental Pollution. 108:2000;45-52
4. Clark D.D, Ensign S.A. Evidence for an inducible nucleotide-dependent acetone carboxylase in Rhodococcus rhodochrous B276. Journal of Bacteriology. 181:1999;2752-2758
5. Cranwell P.A. Monocarboxylic acids in lake sediments: indicators derived from terrestrial and aquatic biota, of paleoenvironmental trophic levels. Chemical Geology. 14:1974;1-14
6. 2 fixation in hydrogen treated soils. Plant and Soil. 229:2001;1-12
7. Drake H, Daniel S, Küsel K, Matthies C, Kuhner C, Braus-Stromeyer S. Acetogenic bacteria: what are the in situ consequences of their diverse metabolic versatilities? Biofactors. 6:1997;13-24
8. 2 in the microbial metabolism of aliphatic epoxides and ketones. Archives of Microbiology. 169:1998;179-187
9. Fang J, Barcelona M.J, Abrajano T, Nogi Y, Kato C. Isotopic composition of fatty acids of extremely piezophilic bacteria from the Mariana Trench at 11,000 m. Marine Chemistry. 80:2002;1-9
10. 13C natural abundance. Journal of Plant Nutrition and Soil Science. 163:2000;157-163
11. 2 fixation. Schlegel H.G, Bowien B. Autotrophic Bacteria. 1989;365-382 Springer, Berlin
12. Green C.T, Scow K.M. Analysis of phospholipid fatty acids (PLFA) to characterize microbial communities in aquifers. Hydrogeology Journal. 8:2000;126-141
13. 14C]anthracene in soil. Applied and Environmental Microbiology. 65:1999;1834-1842
14. Krebs H.A. Carbon dioxide assimilation in heterotrophic organisms. Nature (London). 147:1941;560-563
15. Küsel K, Drake H.L. Effects of environmental parameters on the formation and turnover of acetate by forest soils. Applied and Environmental Microbiology. 61:1995;3667-3675
16. Küsel K, Drake H.L. Microbial turnover of low molecular weight organic acids during leaf litter decomposition. Soil Biology and Biochemistry. 31:1999;107-118
17. Menendez C, Bauer Z, Huber H, Gad'on N, Stetter K.-O, Fuchs G. Presence of acetyl coenzyme A (CoA) carboxylase and propionyl-CoA carboxylase in autotrophic Crenarchaeota and indication for operation of a 3-hydroxypropionate cycle in autotrophic carbon fixation. Journal of Bacteriology. 181:1999;1088-1098
18. Merbach W, Schmidt L, Wittenmeyer L. Die Dauerdüngungsversuche in Halle (Saale). 1999;Teubner, Stuttgart. p. 150
19. Michal G. Biochemical Pathways. 1999;Spektrum Akademischer Verlag, Heidelberg. p. 276
20. Park J.T. Identification of a dedicated recycling pathway for anhydro-N-acetylmuramic acid and N-acetylglucosamine derived from Escherichia coli cell wall murein. Journal of Bacteriology. 183:2001;3842-3847
21. Perez R.C, Matin A. Carbon dioxide assimilation by Thiobacillus novellus under nutrient-limited mixotrophic conditions. Journal of Bacteriology. 150:1982;46-51
22. Raich J.W, Potter C.S. Global patterns of carbon dioxide emissions from soils. Global Biogeochemical Cycles. 9:1995;23-36
23. Raich J.W, Schlesinger W.H. The global carbon dioxide flux in soil respiration and its relationship to vegetation and climate. Tellus. 44B:1992;81-99
24. Schlegel H.G. Allgemeine Mikrobiologie. 1985;Thieme, Stuttgart. 571 pp
25. Silfer J.A, Engel M.H, Macko S.A, Jumeau E.J. Stable carbon isotope analysis of amino acid enantiomers by conventional isotope ratio mass spectrometry and combined gas chromatography/isotope ratio mass spectrometry. Analytical Chemistry. 63:1991;370-374
26. Small F.J, Ensign S.A. Carbon dioxide fixation in the metabolism of propylene and propylene oxide by Xanthobacter strain Py2. Journal of Bacteriology. 177:1995;6170-6175
27. Thiel V, Peckmann J, Richnow H.H, Luth U, Reitner J, Michaelis W. Molecular signals for anaerobic methane oxidation in Black Sea seep carbonates and a microbial mat. Marine Chemistry. 73:2001;97-112
28. Zelles L. Phospholipid fatty acid profiles in selected members of soil microbial communities. Chemosphere. 35:1997;275-294
29. Zhang X, Amelung W. Gas chromatographic determination of muramic acid, glucosamine, mannosamine, and galactosamine in soils. Soil Biology and Biochemistry. 28:1996;1201-1206