Supervised Lowess normalization of comparative genome hybridization data - Application to lactococcal strain comparisons

BMC Bioinformatics

Volumn 9, Issue , 2008, Pages

  van Hijum, Sacha A F T ^a,c   Baerends, Richard J S ^a   Zomer, Aldert L ^a,d   Karsens, Harma A ^a   Martin Requena, Victoria ^b   Trelles, Oswaldo ^b   Kok, Jan ^a   Kuipers, Oscar P ^a  

^a UNIVERSITY OF GRONINGEN   (Netherlands)

^b UNIVERSITY OF MÁLAGA   (Spain)

^c UNIVERSITY OF GREIFSWALD   (Germany)

^d UNIVERSITY COLLEGE CORK   (Ireland)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL STRAINS; CORRECTION FACTORS; DNA MICRO-ARRAY; GENOME SEQUENCES; GENOME VARIATION; LACTOCOCCUS LACTIS IL1403; NORMALIZATION METHODS; SEQUENCE DIVERGENCES;

BIOASSAY; BIOCHIPS; EXPERIMENTS; SET THEORY;

GENES;

DNA FRAGMENT; GENOMIC DNA;

ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; COMPARATIVE GENOMIC HYBRIDIZATION; CONTROLLED STUDY; DNA MICROARRAY; GENE DELETION; GENE IDENTIFICATION; GENE SEQUENCE; GENETIC VARIABILITY; GENOMICS; LACTOCOCCUS; LACTOCOCCUS LACTIS; NONHUMAN; ONLINE SYSTEM; SEQUENCE ANALYSIS; STRAIN DIFFERENCE; SYSTEMATIC ERROR; CHROMOSOME MAP; COMPARATIVE STUDY; DNA SEQUENCE; EVALUATION; GENETIC DATABASE; GENETICS; IN SITU HYBRIDIZATION; METHODOLOGY; REPRODUCIBILITY; SENSITIVITY AND SPECIFICITY;

BACTERIA (MICROORGANISMS); EUKARYOTA; LACTOCOCCUS LACTIS; PROKARYOTA;

CHROMOSOME MAPPING; DATABASES, GENETIC; GENOME, BACTERIAL; IN SITU HYBRIDIZATION; LACTOCOCCUS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, DNA; VARIATION (GENETICS);

EID: 41349107799     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-9-93     Document Type: Article

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