-
1
-
-
0033954256
-
The Protein Data Bank
-
Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N., and Bourne, P. E. (2000) The Protein Data Bank. Nucleic Acids Res. 28, 235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
2
-
-
0029111443
-
The structure of human pancreatic α-amylase at 1.8 Å resolution and comparisons with related enzymes
-
Brayer, G. D., Luo, Y., and Withers, S. G. (1995) The structure of human pancreatic α-amylase at 1.8 Å resolution and comparisons with related enzymes. Protein Sci. 4, 1730-1742.
-
(1995)
Protein Sci
, vol.4
, pp. 1730-1742
-
-
Brayer, G.D.1
Luo, Y.2
Withers, S.G.3
-
3
-
-
0025354545
-
Calcium binding in α-amylases: An x-ray diffraction study at 2.1-Å resolution of two enzymes from Aspergillus
-
Boel, E. L., Brady, A. M., Brzozowski, Z., Derewenda, G. G., Dodson, V. J., Jensen, S. B., Petersen, H., Swift, L., Thim, L., and Woldike, H. F. (1990) Calcium binding in α-amylases: An x-ray diffraction study at 2.1-Å resolution of two enzymes from Aspergillus. Biochemistry 29, 6244-6249.
-
(1990)
Biochemistry
, vol.29
, pp. 6244-6249
-
-
Boel, E.L.1
Brady, A.M.2
Brzozowski, Z.3
Derewenda, G.G.4
Dodson, V.J.5
Jensen, S.B.6
Petersen, H.7
Swift, L.8
Thim, L.9
Woldike, H.F.10
-
4
-
-
0028229326
-
Crystal and molecular structure of barley α-amylase
-
Kadziola, A., Abe, J., Svensson, B., and Haser, R. (1994) Crystal and molecular structure of barley α-amylase. J. Mol. Biol. 239, 104-121.
-
(1994)
J. Mol. Biol
, vol.239
, pp. 104-121
-
-
Kadziola, A.1
Abe, J.2
Svensson, B.3
Haser, R.4
-
5
-
-
0028933531
-
Crystal structure of calcium-depleted Bacillus licheniformis α-amylase at 2.2 Å resolution
-
Machius, M., Wiegand, G., and Huber, R. (1995) Crystal structure of calcium-depleted Bacillus licheniformis α-amylase at 2.2 Å resolution. J. Mol. Biol. 246, 545-559.
-
(1995)
J. Mol. Biol
, vol.246
, pp. 545-559
-
-
Machius, M.1
Wiegand, G.2
Huber, R.3
-
6
-
-
0001631469
-
Structure of Human Salivary α-Amylase at 1.6 Å Resolution: Implications for its Role in the Oral Cavity
-
Ramasubbu, N., Paloth, V., Luo, Y., Brayer, G. D., and Levine, M. J. (1996) Structure of Human Salivary α-Amylase at 1.6 Å Resolution: Implications for its Role in the Oral Cavity. Acta Crystallogr. D52, 435-446.
-
(1996)
Acta Crystallogr
, vol.D52
, pp. 435-446
-
-
Ramasubbu, N.1
Paloth, V.2
Luo, Y.3
Brayer, G.D.4
Levine, M.J.5
-
7
-
-
0030760550
-
Structure of the Aspergillus oryzae α-amylase complexed with the inhibitor acarbose at 2.0 Å resolution
-
Brzozowski, A. M., and Davies, G. J. (1997) Structure of the Aspergillus oryzae α-amylase complexed with the inhibitor acarbose at 2.0 Å resolution. Biochemistry 36, 10837-10845.
-
(1997)
Biochemistry
, vol.36
, pp. 10837-10845
-
-
Brzozowski, A.M.1
Davies, G.J.2
-
9
-
-
0028860889
-
Mechanism-based inhibition of yeast α-glucosidase and human pancreatic α-amylase by a new class of inhibitors
-
Braun, C., Brayer, G. D., and Withers, S. G. (1995) Mechanism-based inhibition of yeast α-glucosidase and human pancreatic α-amylase by a new class of inhibitors. J. Biol. Chem. 270, 26778-26781.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 26778-26781
-
-
Braun, C.1
Brayer, G.D.2
Withers, S.G.3
-
10
-
-
0032978339
-
Cloning, mutagenesis, and structural analysis of human pancreatic α-amylase expressed in Pichia pastoris
-
Rydberg, E. H., Sidhu, G., Vo, H. C., Hewitt, J., Côté, H. C. F., Wang, Y., Numao, S., MacGillivray, R. T. A., Overall, C. M., Brayer, G. D., and Withers, S. G. (1999) Cloning, mutagenesis, and structural analysis of human pancreatic α-amylase expressed in Pichia pastoris. Protein Sci. 8, 635-643.
-
(1999)
Protein Sci
, vol.8
, pp. 635-643
-
-
Rydberg, E.H.1
Sidhu, G.2
Vo, H.C.3
Hewitt, J.4
Côté, H.C.F.5
Wang, Y.6
Numao, S.7
MacGillivray, R.T.A.8
Overall, C.M.9
Brayer, G.D.10
Withers, S.G.11
-
11
-
-
0032964202
-
X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the α-amylase family
-
Uitdehaag, J. C., Mosi, R., Kalk, K. H., van der Veen, B. A., Dijkhuizen, L., Withers, S. G., and Dijkstra, B. W. (1999) X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the α-amylase family. Nat. Struct. Biol. 6, 432-436.
-
(1999)
Nat. Struct. Biol
, vol.6
, pp. 432-436
-
-
Uitdehaag, J.C.1
Mosi, R.2
Kalk, K.H.3
van der Veen, B.A.4
Dijkhuizen, L.5
Withers, S.G.6
Dijkstra, B.W.7
-
12
-
-
0033963529
-
Glycosidase mechanisms: Anatomy of a finely tuned catalyst
-
Zechel, D. L., and Withers, S. G. (2000) Glycosidase mechanisms: Anatomy of a finely tuned catalyst. Acc. Chem. Res. 33, 11-18.
-
(2000)
Acc. Chem. Res
, vol.33
, pp. 11-18
-
-
Zechel, D.L.1
Withers, S.G.2
-
13
-
-
0036802905
-
Glycosidase mechanisms
-
Vasella, A., Davies, G. J., and Bohm, M. (2002) Glycosidase mechanisms. Curr. Opin. Chem. Biol. 6, 619-629.
-
(2002)
Curr. Opin. Chem. Biol
, vol.6
, pp. 619-629
-
-
Vasella, A.1
Davies, G.J.2
Bohm, M.3
-
14
-
-
0037006989
-
Mechanistic analyses of catalysis in human pancreatic α-amylase: Detailed kinetic and structural studies of mutants of three conserved carboxylic acids
-
Rydberg, E. H., Li, C., Maurus, R., Overall, C. M., Brayer, G. D., and Withers, S. G. (2002) Mechanistic analyses of catalysis in human pancreatic α-amylase: Detailed kinetic and structural studies of mutants of three conserved carboxylic acids. Biochemistry 41, 4492-4502.
-
(2002)
Biochemistry
, vol.41
, pp. 4492-4502
-
-
Rydberg, E.H.1
Li, C.2
Maurus, R.3
Overall, C.M.4
Brayer, G.D.5
Withers, S.G.6
-
15
-
-
0037039359
-
Probing the role of the chloride ion in the mechanism of human pancreatic α-amylase
-
Numao, S., Maurus, R., Sidhu, G., Wang, Y., Overall, C. M., Brayer, G. D., and Withers, S. G. (2002) Probing the role of the chloride ion in the mechanism of human pancreatic α-amylase. Biochemistry 41, 215-225.
-
(2002)
Biochemistry
, vol.41
, pp. 215-225
-
-
Numao, S.1
Maurus, R.2
Sidhu, G.3
Wang, Y.4
Overall, C.M.5
Brayer, G.D.6
Withers, S.G.7
-
16
-
-
0001244369
-
The active site of porcine-pancreatic α-amylase: Factors contributing to catalysis
-
Wakim, J., Robinson, M., and Thoma, J. A. (1969) The active site of porcine-pancreatic α-amylase: Factors contributing to catalysis. Carbohydr. Res. 10, 487-503.
-
(1969)
Carbohydr. Res
, vol.10
, pp. 487-503
-
-
Wakim, J.1
Robinson, M.2
Thoma, J.A.3
-
17
-
-
0015605979
-
The metal specificity of mammalian-amylase as revealed by enzyme activity and structural probes
-
Steer, M. L., and Levitzki, A. (1973) The metal specificity of mammalian-amylase as revealed by enzyme activity and structural probes. FEBS Lett. 31, 89-92.
-
(1973)
FEBS Lett
, vol.31
, pp. 89-92
-
-
Steer, M.L.1
Levitzki, A.2
-
18
-
-
0015975824
-
The allosteric activation of mammalian α-amylase by chloride
-
Levitzki, A., and Steer, M. L. (1974) The allosteric activation of mammalian α-amylase by chloride. Eur. J. Biochem. 41, 171-180.
-
(1974)
Eur. J. Biochem
, vol.41
, pp. 171-180
-
-
Levitzki, A.1
Steer, M.L.2
-
19
-
-
0029841641
-
Structural and functional aspects of chloride binding to Alteromonas haloplanctis α-amylase
-
Feller, G., le Bussy, O., Houssier, C., and Gerday, C. (1996) Structural and functional aspects of chloride binding to Alteromonas haloplanctis α-amylase. J. Biol. Chem. 271, 23836-23841.
-
(1996)
J. Biol. Chem
, vol.271
, pp. 23836-23841
-
-
Feller, G.1
le Bussy, O.2
Houssier, C.3
Gerday, C.4
-
20
-
-
0036113602
-
Structural basis of α-amylase activation by chloride
-
Aghajari, N., Feller, G., Gerday, C., and Haser, R. (2002) Structural basis of α-amylase activation by chloride. Protein Sci. 11, 1435-1441.
-
(2002)
Protein Sci
, vol.11
, pp. 1435-1441
-
-
Aghajari, N.1
Feller, G.2
Gerday, C.3
Haser, R.4
-
22
-
-
0034712653
-
Subsite mapping of the human pancreatic α-amylase active site through structural, kinetic, and mutagenesis techniques
-
Brayer, G. D., Sidhu, G., Maurus, R., Rydberg, E., Braun, C., Wang, Y., Nguyen, N., Overall, C., and Withers, S. G. (2000) Subsite mapping of the human pancreatic α-amylase active site through structural, kinetic, and mutagenesis techniques. Biochemistry 39, 4778-4791.
-
(2000)
Biochemistry
, vol.39
, pp. 4778-4791
-
-
Brayer, G.D.1
Sidhu, G.2
Maurus, R.3
Rydberg, E.4
Braun, C.5
Wang, Y.6
Nguyen, N.7
Overall, C.8
Withers, S.G.9
-
23
-
-
20044380522
-
Structural and mechanistic studies of chloride induced activation of human pancreatic α-amylase
-
Maurus, R., Begum, A., Kuo, H. H., Racaza, A., Numao, S., Andersen, C., Tams, J. W., Vind, J., Overall, C. M., Withers, S. G., and Brayer, G. D. (2005) Structural and mechanistic studies of chloride induced activation of human pancreatic α-amylase. Protein Sci. 14, 743-755.
-
(2005)
Protein Sci
, vol.14
, pp. 743-755
-
-
Maurus, R.1
Begum, A.2
Kuo, H.H.3
Racaza, A.4
Numao, S.5
Andersen, C.6
Tams, J.W.7
Vind, J.8
Overall, C.M.9
Withers, S.G.10
Brayer, G.D.11
-
24
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Plainview, NY
-
Sambrook, J., Fritsch, E. F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory Press, Plainview, NY.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
25
-
-
40849131997
-
-
Leatherbarrow, R. J, 1998 GraFit, version 4.0, Erithacus Software Ltd, Staines, U.K
-
Leatherbarrow, R. J. (1998) GraFit, version 4.0, Erithacus Software Ltd., Staines, U.K.
-
-
-
-
26
-
-
0027223568
-
Isolation, crystallization and preliminary diffraction analyses of human pancreatic α-amylase
-
Burk, D., Wang, Y., Dombroski, D., Berghuis, A., Evans, S. V., Luo, Y., Withers, S. G., and Brayer, G. D. (1993) Isolation, crystallization and preliminary diffraction analyses of human pancreatic α-amylase. J. Mol. Biol. 230, 1084-1085.
-
(1993)
J. Mol. Biol
, vol.230
, pp. 1084-1085
-
-
Burk, D.1
Wang, Y.2
Dombroski, D.3
Berghuis, A.4
Evans, S.V.5
Luo, Y.6
Withers, S.G.7
Brayer, G.D.8
-
27
-
-
0031059866
-
Macromolecular crystallography, Part A
-
Otwinowski, Z., and Minor, W. (1997) Macromolecular crystallography, Part A. Methods Enzymol. 276, 307-326.
-
(1997)
Methods Enzymol
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
28
-
-
3543012707
-
Crystallography & NMR system (CNS): A new software system for macromolecular structure determination
-
Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, M., Pannu, N. S., Read, R. J., Rice, L. M., Simonson, T., and Warren, G. L. (1998) Crystallography & NMR system (CNS): A new software system for macromolecular structure determination. Acta Crystallogr. D54, 905-921.
-
(1998)
Acta Crystallogr
, vol.D54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.-S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
29
-
-
0000855343
-
The partial molal volumes of ions in aqueous solution
-
Couture, A. M., and Laidler, K. J. (1956) The partial molal volumes of ions in aqueous solution. Can. J. Chem. 34, 1209-1216.
-
(1956)
Can. J. Chem
, vol.34
, pp. 1209-1216
-
-
Couture, A.M.1
Laidler, K.J.2
-
30
-
-
40849108052
-
Conductances, densities, and viscosities of concentrated solutions of lithium chlorate and of sodium chlorate in water-dioxane mixtures, at 25°C
-
Oliver, B. G., and Campbell, A. N. (1969) Conductances, densities, and viscosities of concentrated solutions of lithium chlorate and of sodium chlorate in water-dioxane mixtures, at 25°C. Can. J. Chem. 47, 4207-4211.
-
(1969)
Can. J. Chem
, vol.47
, pp. 4207-4211
-
-
Oliver, B.G.1
Campbell, A.N.2
-
31
-
-
14644426545
-
Acarbose rearrangement mechanism implied by the kinetic and structural analysis of human pancreatic α-amylase in complex with analogues and their elongated counterparts
-
Li, C., Begum, A., Numao, S., Park, K. H., Withers, S. G., and Brayer, G. D. (2005) Acarbose rearrangement mechanism implied by the kinetic and structural analysis of human pancreatic α-amylase in complex with analogues and their elongated counterparts. Biochemistry 44, 3347-3357.
-
(2005)
Biochemistry
, vol.44
, pp. 3347-3357
-
-
Li, C.1
Begum, A.2
Numao, S.3
Park, K.H.4
Withers, S.G.5
Brayer, G.D.6
|