-
1
-
-
0020665888
-
Nonspecific vaginitis. Diagnostic criteria and microbial and epidemiologic associations
-
Amsel, R., P. A. Totten, C. A. Spiegel, K. C. Chen, D. Eschenbach, and K. K. Holmes. 1983. Nonspecific vaginitis. Diagnostic criteria and microbial and epidemiologic associations. Am. J. Med. 74:14-22.
-
(1983)
Am. J. Med
, vol.74
, pp. 14-22
-
-
Amsel, R.1
Totten, P.A.2
Spiegel, C.A.3
Chen, K.C.4
Eschenbach, D.5
Holmes, K.K.6
-
2
-
-
0036682224
-
PRIMROSE: A computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database
-
Ashelford, K. E., A. J. Weightman, and J. C. Fry. 2002. PRIMROSE: a computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database. Nucleic Acids Res. 30:3481-3489.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 3481-3489
-
-
Ashelford, K.E.1
Weightman, A.J.2
Fry, J.C.3
-
3
-
-
33746964502
-
Design and evaluation of 16S rRNA sequence based oligonucleotide probes for the detection and quantification of Comamonas testosteroni in mixed microbial communities
-
Bathe, S., and M. Hausner. 2006. Design and evaluation of 16S rRNA sequence based oligonucleotide probes for the detection and quantification of Comamonas testosteroni in mixed microbial communities. BMC Microbiol. 6:54.
-
(2006)
BMC Microbiol
, vol.6
, pp. 54
-
-
Bathe, S.1
Hausner, M.2
-
4
-
-
3042719765
-
Detection of Atopobium vaginae in postmenopausal women by cultivation-independent methods warrants further investigation
-
Burton, J. P., E. Devillard, P. A. Cadieux, J. A. Hammond, and G. Reid. 2004. Detection of Atopobium vaginae in postmenopausal women by cultivation-independent methods warrants further investigation. J. Clin. Microbiol. 42:1829-1831.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 1829-1831
-
-
Burton, J.P.1
Devillard, E.2
Cadieux, P.A.3
Hammond, J.A.4
Reid, G.5
-
5
-
-
0042121237
-
-
Chenna, R., H. Sugawara, T. Koike, R. Lopez, T. J. Gibson, D. G. Higgins, and J. D. Thompson. 2003. Multiple sequence alignment with the Clustal series of programs (http://www.ebi.ac.uk/clustalw/). Nucleic Acids Res. 31: 3497-3500.
-
Chenna, R., H. Sugawara, T. Koike, R. Lopez, T. J. Gibson, D. G. Higgins, and J. D. Thompson. 2003. Multiple sequence alignment with the Clustal series of programs (http://www.ebi.ac.uk/clustalw/). Nucleic Acids Res. 31: 3497-3500.
-
-
-
-
6
-
-
1342288004
-
The Jalview Java alignment editor
-
Clamp, M., J. Cuff, S. M. Searle, and G. J. Barton. 2004. The Jalview Java alignment editor. Bioinformatics 20:426-427.
-
(2004)
Bioinformatics
, vol.20
, pp. 426-427
-
-
Clamp, M.1
Cuff, J.2
Searle, S.M.3
Barton, G.J.4
-
7
-
-
0029114640
-
Bacterial vaginosis and HIV seroprevalence among female commercial sex workers in Chiang Mai, Thailand
-
Cohen, C. R., A. Duerr, N. Pruithithada, S. Rugpao, S. Hillier, P. Garcia, and K. Nelson. 1995. Bacterial vaginosis and HIV seroprevalence among female commercial sex workers in Chiang Mai, Thailand. AIDS 9:1093-1097.
-
(1995)
AIDS
, vol.9
, pp. 1093-1097
-
-
Cohen, C.R.1
Duerr, A.2
Pruithithada, N.3
Rugpao, S.4
Hillier, S.5
Garcia, P.6
Nelson, K.7
-
8
-
-
29044443396
-
Enumeration of specific bacterial populations in complex intestinal communities using quantitative PCR based on the chaperonin-60 target
-
Dumonceaux, T. J., J. E. Hill, S. A. Briggs, K. K. Amoako, S. M. Hemmingsen, and A. G. Van Kessel. 2006. Enumeration of specific bacterial populations in complex intestinal communities using quantitative PCR based on the chaperonin-60 target. J. Microbiol. Methods 64:46-62.
-
(2006)
J. Microbiol. Methods
, vol.64
, pp. 46-62
-
-
Dumonceaux, T.J.1
Hill, J.E.2
Briggs, S.A.3
Amoako, K.K.4
Hemmingsen, S.M.5
Van Kessel, A.G.6
-
9
-
-
0024552487
-
Prevalence of hydrogen peroxide-producing Lactobacillus species in normal women and women with bacterial vaginosis
-
Eschenbach, D. A., P. R. Davick, B. L. Williams, S. J. Klebanoff, K. Young-Smith, C. M. Critchlow, and K. K. Holmes. 1989. Prevalence of hydrogen peroxide-producing Lactobacillus species in normal women and women with bacterial vaginosis. J. Clin. Microbiol. 27:251-256.
-
(1989)
J. Clin. Microbiol
, vol.27
, pp. 251-256
-
-
Eschenbach, D.A.1
Davick, P.R.2
Williams, B.L.3
Klebanoff, S.J.4
Young-Smith, K.5
Critchlow, C.M.6
Holmes, K.K.7
-
10
-
-
33947255745
-
Cultivation-independent analysis of changes in bacterial vaginosis flora following metronidazole treatment
-
Ferris, M. J., J. Norori, M. Zozaya-Hinchliffe, and D. H. Martin. 2007. Cultivation-independent analysis of changes in bacterial vaginosis flora following metronidazole treatment. J. Clin. Microbiol. 45:1016-1018.
-
(2007)
J. Clin. Microbiol
, vol.45
, pp. 1016-1018
-
-
Ferris, M.J.1
Norori, J.2
Zozaya-Hinchliffe, M.3
Martin, D.H.4
-
11
-
-
27644443333
-
Molecular identification of bacteria associated with bacterial vaginosis
-
Fredricks, D. N., T. L. Fiedler, and J. M. Marrazzo. 2005. Molecular identification of bacteria associated with bacterial vaginosis. N. Engl. J. Med. 353:1899-1911.
-
(2005)
N. Engl. J. Med
, vol.353
, pp. 1899-1911
-
-
Fredricks, D.N.1
Fiedler, T.L.2
Marrazzo, J.M.3
-
12
-
-
35348852708
-
Targeted PCR for detection of vaginal bacteria associated with bacterial vaginosis
-
Fredricks, D. N., T. L. Fiedler, K. K. Thomas, B. B. Oakley, and J. M. Marrazzo. 2007. Targeted PCR for detection of vaginal bacteria associated with bacterial vaginosis. J. Clin. Microbiol. 45:3270-3276.
-
(2007)
J. Clin. Microbiol
, vol.45
, pp. 3270-3276
-
-
Fredricks, D.N.1
Fiedler, T.L.2
Thomas, K.K.3
Oakley, B.B.4
Marrazzo, J.M.5
-
13
-
-
24344504553
-
Characterization of vaginal microflora of healthy, nonpregnant women by chaperonin-60 sequence-based methods
-
Hill, J. E., S. H. Goh, D. M. Money, M. Doyle, A. Li, W. L. Crosby, M. Links, A. Leung, D. Chan, and S. M. Hemmingsen. 2005. Characterization of vaginal microflora of healthy, nonpregnant women by chaperonin-60 sequence-based methods. Am. J. Obstet. Gynecol. 193:682-692.
-
(2005)
Am. J. Obstet. Gynecol
, vol.193
, pp. 682-692
-
-
Hill, J.E.1
Goh, S.H.2
Money, D.M.3
Doyle, M.4
Li, A.5
Crosby, W.L.6
Links, M.7
Leung, A.8
Chan, D.9
Hemmingsen, S.M.10
-
14
-
-
20344371715
-
Microbes on the human vaginal epithelium
-
Hyman, R. W., M. Fukushima, L. Diamond, J. Kumm, L. C. Giudice, and R. W. Davis. 2005. Microbes on the human vaginal epithelium. Proc. Natl. Acad. Sci. USA 102:7952-7957.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 7952-7957
-
-
Hyman, R.W.1
Fukushima, M.2
Diamond, L.3
Kumm, J.4
Giudice, L.C.5
Davis, R.W.6
-
15
-
-
0035175274
-
The RDP-II (Ribosomal Database Project)
-
Maidak, B. L., J. R. Cole, T. G. Lilburn, C. T. Parker, Jr., P. R. Saxman, R. J. Farris, G. M. Garrity, G. J. Olsen, T. M. Schmidt, and J. M. Tiedje. 2001. The RDP-II (Ribosomal Database Project). Nucleic Acids Res. 29:173-174.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 173-174
-
-
Maidak, B.L.1
Cole, J.R.2
Lilburn, T.G.3
Parker Jr., C.T.4
Saxman, P.R.5
Farris, R.J.6
Garrity, G.M.7
Olsen, G.J.8
Schmidt, T.M.9
Tiedje, J.M.10
-
16
-
-
0037357804
-
Phylogenetic analysis of some Sporomusa sub-branch members isolated from human clinical specimens: Description of Megasphaera micronuciformis sp. nov
-
Marchandin, H., E. Jumas-Bilak, B. Gay, C. Teyssier, H. Jean-Pierre, M. S. de Buochberg, C. Carriere, and J. P. Carlier. 2003. Phylogenetic analysis of some Sporomusa sub-branch members isolated from human clinical specimens: description of Megasphaera micronuciformis sp. nov. Int. J. Syst. Evol. Microbiol. 53:547-553.
-
(2003)
Int. J. Syst. Evol. Microbiol
, vol.53
, pp. 547-553
-
-
Marchandin, H.1
Jumas-Bilak, E.2
Gay, B.3
Teyssier, C.4
Jean-Pierre, H.5
de Buochberg, M.S.6
Carriere, C.7
Carlier, J.P.8
-
17
-
-
0032710330
-
Vaginal lactobacilli, microbial flora, and risk of human immunodeficiency virus type 1 and sexually transmitted disease acquisition
-
Martin, H. L., B. A. Richardson, P. M. Nyange, L. Lavreys, S. L. Hillier, B. Chohan, K. Mandaliya, J. O. Ndinya-Achola, J. Bwayo, and J. Kreiss. 1999. Vaginal lactobacilli, microbial flora, and risk of human immunodeficiency virus type 1 and sexually transmitted disease acquisition. J. Infect. Dis. 180:1863-1868.
-
(1999)
J. Infect. Dis
, vol.180
, pp. 1863-1868
-
-
Martin, H.L.1
Richardson, B.A.2
Nyange, P.M.3
Lavreys, L.4
Hillier, S.L.5
Chohan, B.6
Mandaliya, K.7
Ndinya-Achola, J.O.8
Bwayo, J.9
Kreiss, J.10
-
18
-
-
0026088584
-
Reliability of diagnosing bacterial vaginosis is improved by a standardized method of Gram stain interpretation
-
Nugent, R. P., M. A. Krohn, and S. L. Hillier. 1991. Reliability of diagnosing bacterial vaginosis is improved by a standardized method of Gram stain interpretation. J. Clin. Microbiol. 29:297-301.
-
(1991)
J. Clin. Microbiol
, vol.29
, pp. 297-301
-
-
Nugent, R.P.1
Krohn, M.A.2
Hillier, S.L.3
-
19
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
20
-
-
0034094263
-
Bacterial vaginosis
-
Sobel, J. D. 2000. Bacterial vaginosis. Annu. Rev. Med. 51:349-356.
-
(2000)
Annu. Rev. Med
, vol.51
, pp. 349-356
-
-
Sobel, J.D.1
-
21
-
-
0026045420
-
Bacterial vaginosis
-
Spiegel, C. A. 1991. Bacterial vaginosis. Clin. Microbiol. Rev. 4:485-502.
-
(1991)
Clin. Microbiol. Rev
, vol.4
, pp. 485-502
-
-
Spiegel, C.A.1
-
22
-
-
0018828629
-
Anaerobic bacteria in nonspecific vaginitis
-
Spiegel, C. A., R. Amsel, D. Eschenbach, F. Schoenknecht, and K. K. Holmes. 1980. Anaerobic bacteria in nonspecific vaginitis. N. Engl. J. Med. 303:601-607.
-
(1980)
N. Engl. J. Med
, vol.303
, pp. 601-607
-
-
Spiegel, C.A.1
Amsel, R.2
Eschenbach, D.3
Schoenknecht, F.4
Holmes, K.K.5
-
23
-
-
33947302827
-
Taxonomic parameters revisited: Tarnished gold standards
-
Stackebrandt, E., and J. Ebers. 2006. Taxonomic parameters revisited: tarnished gold standards. Microbiol. Today 33:152-155.
-
(2006)
Microbiol. Today
, vol.33
, pp. 152-155
-
-
Stackebrandt, E.1
Ebers, J.2
-
24
-
-
40549137644
-
-
Staroscik, A. 2004, posting date. Calculator for determining the number of copies of a template. http://www.uri.edu/research/gsc/resources/cndna. html.
-
Staroscik, A. 2004, posting date. Calculator for determining the number of copies of a template. http://www.uri.edu/research/gsc/resources/cndna. html.
-
-
-
-
25
-
-
0033844490
-
High levels of tumor necrosis factor-alpha and interleukin-1β in bacterial vaginosis may increase susceptibility to human immunodeficiency virus
-
Sturm-Ramirez, K., A. Gaye-Diallo, G. Eisen, S. Mboup, and P. J. Kanki. 2000. High levels of tumor necrosis factor-alpha and interleukin-1β in bacterial vaginosis may increase susceptibility to human immunodeficiency virus. J. Infect. Dis. 182:467-473.
-
(2000)
J. Infect. Dis
, vol.182
, pp. 467-473
-
-
Sturm-Ramirez, K.1
Gaye-Diallo, A.2
Eisen, G.3
Mboup, S.4
Kanki, P.J.5
-
26
-
-
40549117359
-
-
Swofford, D. 2002. PAUP, Phylogenetic Analysis Using Parsimony and other methods, version 4.0. Sinauer Associates, Sunderland, MA
-
Swofford, D. 2002. PAUP - Phylogenetic Analysis Using Parsimony (and other methods), version 4.0. Sinauer Associates, Sunderland, MA.
-
-
-
-
27
-
-
0032954857
-
HIV infection and disturbances of vaginal flora during pregnancy
-
Taha, T. E., R. H. Gray, N. I. Kumwenda, D. R. Hoover, L. A. Mtimavalye, G. N. Liomba, J. D. Chiphangwi, G. A. Dallabetta, and P. G. Miotti. 1999. HIV infection and disturbances of vaginal flora during pregnancy. J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. 20:52-59.
-
(1999)
J. Acquir. Immune Defic. Syndr. Hum. Retrovirol
, vol.20
, pp. 52-59
-
-
Taha, T.E.1
Gray, R.H.2
Kumwenda, N.I.3
Hoover, D.R.4
Mtimavalye, L.A.5
Liomba, G.N.6
Chiphangwi, J.D.7
Dallabetta, G.A.8
Miotti, P.G.9
-
28
-
-
2942685264
-
Cloning of 16S rRNA genes amplified from normal and disturbed vaginal microflora suggests a strong association between Atopobium vaginae, Gardnerella vaginalis and bacterial vaginosis
-
Verhelst, R., H. Verstraelen, G. Claeys, G. Verschraegen, J. Delanghe, L. Van Simaey, C. De Ganck, M. Temmerman, and M. Vaneechoutte. 2004. Cloning of 16S rRNA genes amplified from normal and disturbed vaginal microflora suggests a strong association between Atopobium vaginae, Gardnerella vaginalis and bacterial vaginosis. BMC Microbiol. 4:16.
-
(2004)
BMC Microbiol
, vol.4
, pp. 16
-
-
Verhelst, R.1
Verstraelen, H.2
Claeys, G.3
Verschraegen, G.4
Delanghe, J.5
Van Simaey, L.6
De Ganck, C.7
Temmerman, M.8
Vaneechoutte, M.9
-
29
-
-
0034753301
-
Analysis of bacterial vaginosis-related amines in vaginal fluid by gas chromatography and mass spectrometry
-
Wolrath, H., U. Forsum, P. G. Larsson, and H. Boren. 2001. Analysis of bacterial vaginosis-related amines in vaginal fluid by gas chromatography and mass spectrometry. J. Clin. Microbiol. 39:4026-4031.
-
(2001)
J. Clin. Microbiol
, vol.39
, pp. 4026-4031
-
-
Wolrath, H.1
Forsum, U.2
Larsson, P.G.3
Boren, H.4
-
30
-
-
4444351726
-
Characterization of vaginal microbial communities in adult healthy women using cultivation-independent methods
-
Zhou, X., S. J. Bent, M. G. Schneider, C. C. Davis, M. R. Islam, and L. J. Forney. 2004. Characterization of vaginal microbial communities in adult healthy women using cultivation-independent methods. Microbiology 150: 2565-2573.
-
(2004)
Microbiology
, vol.150
, pp. 2565-2573
-
-
Zhou, X.1
Bent, S.J.2
Schneider, M.G.3
Davis, C.C.4
Islam, M.R.5
Forney, L.J.6
|