Genetic characterization of the chemokine receptor CXCR4 gene in lagomorphs: Comparison between the families Ochotonidae and Leporidae

International Journal of Immunogenetics

Volumn 35, Issue 2, 2008, Pages 111-117

  Abrantes, J ^a,b   Esteves, P J ^a   Carmo, C R ^a   Muller A ^b   Thompson, G ^b   Van Der Loo, W ^a,b  

^a CENTRO DE INVESTIGAÇÃO EM BIODIVERSIDADE E RECURSOS GENÉTICOS   (Portugal)

^b UNIVERSITY OF PORTO   (Portugal)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMOKINE RECEPTOR CXCR4;

AMINO ACID SUBSTITUTION; ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CELL DIFFERENTIATION; COMPARATIVE STUDY; GENE EXPRESSION; GENETIC TRAIT; GENETIC VARIABILITY; IMMUNE SYSTEM; LAGOMORPH; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SURFACE PROPERTY;

AMINO ACID SUBSTITUTION; ANIMALS; HARES; HUMANS; MYXOMA VIRUS; MYXOMATOSIS, INFECTIOUS; PHYLOGENY; RABBITS; RECEPTORS, CXCR4; SPECIES SPECIFICITY;

BUNOLAGUS; LAGOMORPHA; LEPORIDAE; LEPUS; MYXOMA VIRUS; OCHOTONA; OCHOTONIDAE; ORYCTOLAGUS; ORYCTOLAGUS CUNICULUS; SYLVILAGUS;

EID: 40449088059     PISSN: 17443121     EISSN: 1744313X     Source Type: Journal    
DOI: 10.1111/j.1744-313X.2007.00735.x     Document Type: Article

References (28)

1. Best, S.M. Kerr, P.J. (2000a) Coevolution of host and virus: the pathogenesis of virulent and attenuated strains of myxoma virus in resistant and susceptible European rabbits. Virology, 267, 36.
2. Best, S.M., Collins, S.V. Kerr, P.J. (2000b) Coevolution of host and virus: cellular localization of virus in myxoma virus infection of resistant and susceptible European rabbits. Virology, 277, 76.
3. Cameron, C., Hota-Mitchell, S., Chen, L., Barrett, J., Cao, J.X., Macaulay, C., Willer, D., Evans, D. McFadden, G. (1999) The Complete DNA Sequence of Myxoma Virus. Virology, 264, 298.
4. Carmo, C.R., Esteves, P.J., Ferrand, N. van der Loo, W. (2006) Genetic variation at chemokine receptor CCR5 in leporids: alteration at the 2nd extracellular domain by gene conversion with CCR2 in Oryctolagus, but not in Sylvilagus and Lepus species. Immunogenetics, 58, 494.
5. Felsenstein, J. (1985) Confidence limits on phylogenies - an approach using the bootstrap. Evolution, 39, 783.
6. Feng, Y., Broder, C.C., Kennedy, P.E. Berger, E.A. (1996) HIV-1 entry cofactor: functional cDNA cloning of a seven- transmembrane, G protein-coupled receptor. Science, 272, 872.
7. Fenner, F. (1983) Biological control, as exemplified by smallpox eradication and myxomatosis. Proceedings of the Royal Society B: Biological Sciences, 218, 259.
8. Ferrand, N. Branco, M. (2007) The evolutionary history of the European rabbit (Oryctolagus cuniculus): major patterns of population differentiation and geographic expansion inferred from protein polymorphism. In : Phylogeography of Southern European Refugia (ed. by S. Weiss N. Ferrand p. 207. Springer, the Netherlands.
9. Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows95/98/NT. Nucleic Acids Symposium Series, 41, 95.
10. Horuk, R., Chitnis, C.E., Darbonne, W.C., Colby, T.J., Rybicki, A., Hadley, T.J. Miller, L.H. (1993) A receptor for the malarial parasite Plasmodium vivax: the erythrocyte chemokine receptor. Science, 261, 1182.
11. Huising, M.O., Stet, R.J., Kruiswijk, C.P., Savelkoul, H.F. Lidy Verburg-van Kemenade, B.M. (2003) Molecular Evolution of CXC chemokines: extant chemokines originate from the CNS. Trends in Immunology, 24, 306.
12. Krug, M.S. Berger, S.L. (1987) First-strand cDNA synthesis primed with oligo (dT). Methods in Enzymology, 152, 316.
13. Kumar, S., Tamura, K. Nei, M. (2004) MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Briefings in Bioinformatics, 5, 150.
14. Lalani, A.S., Masters, J., Zeng, W., Barrett, J., Pannu, R., Everett, H., Arendt, C.W. McFadden, G. (1999) Use of chemokine receptors by poxviruses. Science, 286, 1968.
15. Lio, P. Vannucci, M. (2003) Investigating the evolution and structure of chemokine receptors. Gene, 317, 29.
16. - deficient mice. Proceedings of the National Academy of Sciences of the USA, 95, 9448.
17. Matthee, C.A., van Vuuren, B.J., Bell, D. Robinson, T.J. (2004) A molecular supermatrix of the rabbits and hares (Leporidae) allows for the identification of five intercontinental exchanges during the Miocene. Systematic Biology, 53, 433.
18. Murphy, P.M. (1993) Molecular mimicry and the generation of host defense protein diversity. Cell, 72, 823.
19. Robinson, T.J. Matthee, C.A. (2005) Phylogeny and evolutionary origins of the Leporidae: a review of cytogenetics, molecular analyses and a supermatrix analysis. Mammal Review, 35, 231.
20. Roland, J., Murphy, B.J., Ahr, B., Robert-Hebmann, V., Delauzun, V., Nye, K.E., Devaux, C. Biard-Piechaczyk, M. (2003) Role of the intracellular domains of CXCR4 in SDF-1-mediated signaling. Blood, 101, 399.
21. Rossi, D. Zlotnik, A. (2000) The biology of chemokine and their receptors. Annual Review of Immunology, 18, 217.
22. Rozas, J., Sánchez-Delbarrio, J.C., Messeguer, X. Rozas, R. (2003) DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics, 19, 2496.
23. Seet, B.T., Johnston, J.B., Brunetti, C.R., Barrett, J.W., Everett, H., Cameron, C., Sypula, J., Nazarian, S.H., Lucas, A. McFadden, G. (2003) Poxviruses and immune evasion. Annual Review of Immunology, 21, 377.
24. Thompson, J.D., Higgins, D.G. Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Symposium Series, 22, 4673.
25. Vlahakis, S.R., Villasis-Keever, A., Gomez, T., Vanegas, M., Vlahakis, N. Paya, C.V. (2002) G protein-coupled chemokine receptors induce both survival and apoptotic signaling pathways. Journal of Immunology, 169, 5546.
26. Wegner, S.A., Ehrenberg, P.K., Chang, G., Dayhoff, D.E., Sleeker, A.L. Michael, N.L. (1998) Genomic organization and functional characterization of the chemokine receptor CXCR4, a major entry co-receptor for human immunodeficiency virus type 1. Journal of Biological Chemistry, 273, 4754.
27. Yu, N., Zheng, C., Zhang, Y.P. Li, W.H. (2000) Molecular systematics of pikas (genus Ochotona) inferred from mitochondrial DNA sequences. Molecular Phylogenetics and Evolution, 16, 85.
28. Zúñiga, M.C. (2002) A pox on thee! Manipulation of the host immune system by myxoma virus and implications for viral-host co-adaptation. Virus Research, 88, 17.