Differential expression analysis of Liprin-α2 in hibernating bat (Rhinolophus ferrumequinum)

Progress in Natural Science

Volumn 18, Issue 1, 2008, Pages 27-32

  Yuan, Lihong ^a,b,c   Zuo, Xueguo ^a   Chen, Jinping ^d   Lin, Benfu ^e   Zhang, Junpeng ^b   Sun, Min ^e   Zhang, Shuyi ^a  

^a EAST CHINA NORMAL UNIVERSITY   (China)

^b INSTITUTE OF ZOOLOGY   (China)

^c UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

^d Guangdong Academy of Sciences   (China)

^e GUANGZHOU INSTITUTES OF BIOMEDICINE AND HEALTH   (China)

Author keywords

Bat; Differential expression; Hibernation; Liprin 2

Indexed keywords

ENERGY RESOURCES; MUSCLE; POLYMERASE CHAIN REACTION; TRANSCRIPTION;

BAT; BRAIN TISSUE; DIFFERENTIAL EXPRESSION; EXPRESSION ANALYSIS; EXPRESSION PATTERNS; HEART TISSUES; HIBERNATION; LIPRIN-Α2; MOLECULAR MECHANISM; SUBTRACTIVE HYBRIDIZATION;

BRAIN;

EID: 40049106652     PISSN: 10020071     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.pnsc.2007.08.001     Document Type: Article

References (37)

1. W. Galster P.R. Morrison Gluconeogenesis in arctic ground squirrels between periods of hibernation Am J Physiol 228 1 1975 325 330
2. G. Kortner F. Geiser The temporal organization of daily torpor and hibernation: circadian and circannual rhythms Chronobiol Int 17 2 2000 103 128
3. P. Panula K. Karlstedt T. Sallmen The histaminergic system in the brain: structural characteristics and changes in hibernation J Chem Neuroanat 18 1–2 2000 65 74
4. B.F. O’Hara F.L. Watson H.K. Srere Gene expression in the brain across the hibernation cycle J Neurosci 19 10 1999 3781 3790
5. A.M. Strijkstra S. Daan Dissimilarity of slow-wave activity enhancement by torpor and sleep deprivation in a hibernator Am J Physiol 275 4 Pt. 2 1998 R1110 R1117
6. L.C.H. Wang T.F. Lee Handbook of physiology: environmental physiology, torpor and hibernation in mammals: metabolic, physiological, and biochemical adaptations 1996 Oxford University Press New York p. 507–32
7. P.W. Hochachka Defense strategies against hypoxia and hypothermia Science 231 4735 1986 234 241
8. K.U. Frerichs J.M. Hallenbeck Hibernation in ground squirrels induces state and species-specific tolerance to hypoxia and aglycemia: an in vitro study in hippocampal slices J Cereb Blood Flow Metab 18 2 1998 168 175
9. H.V. Carey M.T. Andrews S.L. Martin Mammalian hibernation: cellular and molecular responses to depressed metabolism and low temperature Physiol Rev 83 4 2003 1153 1181
10. H.J. Harlow T. Lohuis T.D. Beck Muscle strength in overwintering bears Nature 409 6823 2001 997
11. V.M. Sharapov Influence of animal hibernation on the development of mycoses Mycopathologia 84 2–3 1984 77 80
12. G.B. Kemper R.L. Ruben Effect of 7,12-dimethylbenz(a)anthracene on the integument of the hibernating and nonhibernating 13-lined ground squirrel Comp Biochem Physiol C 73 2 1982 445 450
13. K.B. Storey J.M. Storey Metabolic rate depression in animals: transcriptional and translational controls Biol Rev Camb Philos Soc 79 1 2004 207 233
14. K.M. Brauch N.D. Dhruv E.A. Hanse Digital transcriptome analysis indicates adaptive mechanisms in the heart of a hibernating mammal Physiol Genomics 23 2 2005 227 234
15. P.J. Morin K.B. Storey Antioxidant defense in hibernation: Cloning and expression of peroxiredoxins from hibernating ground squirrels, Spermophilus tridecemlineatus Arch Biochem Biophys 461 1 2007 59 65
16. K.L. Drew M.E. Rice T.B. Kuhn Neuroprotective adaptations in hibernation: therapeutic implications for ischemia-reperfusion, traumatic brain injury and neurodegenerative diseases Free Radic Biol Med 31 5 2001 563 573
17. H.C. Heller Hibernation: neural aspects Annu Rev Physiol 41 1979 305 321
18. P.I. Pakhotin I.D. Pakhotina A.B. Belousov The study of brain slices from hibernating mammals in vitro and some approaches to the analysis of hibernation problems in vivo Prog Neurobiol 40 2 1993 123 161
19. D.R. Weaver The suprachiasmatic nucleus: a 25-year retrospective J Biol Rhythms 13 2 1998 100 112
20. K.J. Livak T.D. Schmittgen Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method Methods 25 4 2001 402 408
21. L. Yuan J. Chen B. Lin Up-regulation of a non-kinase activity isoform of Ca(2+)/calmodulin-dependent protein kinase kinase beta1 (CaMKKbeta1) in hibernating bat brain Comp Biochem Physiol B Biochem Mol Biol 146 3 2007 438 444
22. C. Serra-Pages N.L. Kedersha L. Fazikas The LAR transmembrane protein tyrosine phosphatase and a coiled-coil LAR-interacting protein co-localize at focal adhesions EMBO J 14 12 1995 2827 2838
23. C. Serra-Pages Q.G. Medley M. Tang Liprins, a family of LAR transmembrane protein-tyrosine phosphatase-interacting proteins J Biol Chem 273 25 1998 15611 15620
24. M. Wyszynski E. Kim A.W. Dunah Interaction between GRIP and liprin-alpha/SYD2 is required for AMPA receptor targeting Neuron 34 1 2002 39 52
25. S. Schoch P.E. Castillo T. Jo RIM1alpha forms a protein scaffold for regulating neurotransmitter release at the active zone Nature 415 6869 2002 321 326
26. M. Zhen Y. Jin The liprin protein SYD-2 regulates the differentiation of presynaptic termini in C. elegans Nature 401 6751 1999 371 375
27. N. Kaufmann J. DeProto R. Ranjan Drosophila liprin-alpha and the receptor phosphatase Dlar control synapse morphogenesis Neuron 34 1 2002 27 38
28. J. Ko S. Kim J.G. Valtschanoff Interaction between liprin-alpha and GIT1 is required for AMPA receptor targeting J Neurosci 23 5 2003 1667 1677
29. P. Chavrier B. Goud The role of ARF and Rab GTPases in membrane transport Curr Opin Cell Biol 11 4 1999 466 475
30. Eddy SF, Storey KB. Gene expression in hibernation: testing skeletal muscle of little brown bats, Myotis lucifugus , using commercially available cDNA microarrays. In: Proceedings of the virtual conference in genomics and bioinformatics; 2001. Available from: http://www.ndsu.nodk.edu/virtual-genomics/meetings.htm [2007-07-01].
31. S.F. Eddy K.B. Storey Dynamic use of cDNA arrays: heterologous probing for gene discovery and exploration of animal adaptations in stressful environments Cell and molecular responses to stress vol. 3 2002 Elsevier Press Amsterdam 297 325
32. D.S. Hittel K.B. Storey Differential expression of mitochondria-encoded genes in a hibernating mammal J Exp Biol 205 Pt. 11 2002 1625 1631
33. A. Fahlman J.M. Storey K.B. Storey Gene up-regulation in heart during mammalian hibernation Cryobiology 40 4 2000 332 342
34. L. Diatchenko Y.F. Lau A.P. Campbell Suppression subtractive hybridization: a method for generating differentially regulated or tissue-specific cDNA probes and libraries Proc Natl Acad Sci USA 93 12 1996 6025 6030
35. K.U. Frerichs C. Kennedy L. Sokoloff Local cerebral blood flow during hibernation, a model of natural tolerance to “cerebral ischemia” J Cereb Blood Flow Metab 14 2 1994 193 205
36. K.U. Frerichs Neuroprotective strategies in nature–novel clues for the treatment of stroke and trauma Acta Neurochir Suppl 73 1999 57 61
37. F. Zhou X. Zhu R.J. Castellani Hibernation, a model of neuroprotection Am J Pathol 158 6 2001 2145 2151