-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
33745882358
-
-
Blanco, M., Blanco, J. E., Dahbi, G., Alonso, M. P., Mora, A., Coira, M. A., Madrid, C., Juárez, A., Bernárdez, M. I. & other authors (2006). Identification of two new intimin types in atypical enteropathogenic Escherichia coli. Int Microbiol 9, 103-110.
-
Blanco, M., Blanco, J. E., Dahbi, G., Alonso, M. P., Mora, A., Coira, M. A., Madrid, C., Juárez, A., Bernárdez, M. I. & other authors (2006). Identification of two new intimin types in atypical enteropathogenic Escherichia coli. Int Microbiol 9, 103-110.
-
-
-
-
3
-
-
0031010193
-
Genetic and phenotypic analysis of Escherichia coli with enteropathogenic characteristics isolated from Seattle children
-
Bokete, T. N., Whittam, T. S., Wilson, R. A., Clausen, C. R., O'Callahan, C. M., Moseley, S. L., Fritsche, T. R. & Tarr, P. I. (1997). Genetic and phenotypic analysis of Escherichia coli with enteropathogenic characteristics isolated from Seattle children. J Infect Dis 175, 1382-1389.
-
(1997)
J Infect Dis
, vol.175
, pp. 1382-1389
-
-
Bokete, T.N.1
Whittam, T.S.2
Wilson, R.A.3
Clausen, C.R.4
O'Callahan, C.M.5
Moseley, S.L.6
Fritsche, T.R.7
Tarr, P.I.8
-
4
-
-
0028958362
-
Simultaneous identification of strains of Escherichia coli serotype O157:H7 and their Shiga-like toxin type by mismatch amplification mutation assay-multiplex PCR
-
Cebula, T. A., Payne, W. L. & Feng, P. (1995). Simultaneous identification of strains of Escherichia coli serotype O157:H7 and their Shiga-like toxin type by mismatch amplification mutation assay-multiplex PCR. J Clin Microbiol. 33, 248-250.
-
(1995)
J Clin Microbiol
, vol.33
, pp. 248-250
-
-
Cebula, T.A.1
Payne, W.L.2
Feng, P.3
-
5
-
-
34548084946
-
The Yersinia kristensenii O11 O-antigen gene cluster was acquired by lateral gene transfer and incorporated at a novel chromosomal locus
-
Cunneen, M. M. & Reeves, P. R. (2007). The Yersinia kristensenii O11 O-antigen gene cluster was acquired by lateral gene transfer and incorporated at a novel chromosomal locus. Mol Biol Evol 24, 1355-1365.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1355-1365
-
-
Cunneen, M.M.1
Reeves, P.R.2
-
6
-
-
0031883081
-
Relationships among the O-antigen gene clusters of Salmonella enterica groups B, D1, D2, and D3
-
Curd, H., Liu, D. & Reeves, P. (1998). Relationships among the O-antigen gene clusters of Salmonella enterica groups B, D1, D2, and D3. J Bacteriol 180, 1002-1007.
-
(1998)
J Bacteriol
, vol.180
, pp. 1002-1007
-
-
Curd, H.1
Liu, D.2
Reeves, P.3
-
7
-
-
3142756502
-
Open source clustering software
-
de Hoon, M. J., Imoto, S., Nolan, J. & Miyano, S. (2004). Open source clustering software. Bioinformatics 20, 1453-1454.
-
(2004)
Bioinformatics
, vol.20
, pp. 1453-1454
-
-
de Hoon, M.J.1
Imoto, S.2
Nolan, J.3
Miyano, S.4
-
8
-
-
0032959551
-
Enterohemorrhagic Escherichia coli O157:H7 produces Tir, which is translocated to the host cell membrane but is not tyrosine phosphorylated
-
DeVinney, R., Stein, M., Reinscheid, D., Abe, A., Ruschkowski, S. & Finlay, B. (1999). Enterohemorrhagic Escherichia coli O157:H7 produces Tir, which is translocated to the host cell membrane but is not tyrosine phosphorylated. Infect Immun 67, 2389-2398.
-
(1999)
Infect Immun
, vol.67
, pp. 2389-2398
-
-
DeVinney, R.1
Stein, M.2
Reinscheid, D.3
Abe, A.4
Ruschkowski, S.5
Finlay, B.6
-
9
-
-
0027511858
-
The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme
-
Dixon, D. A. & Kowalczykowski, S. C. (1993). The recombination hotspot chi is a regulatory sequence that acts by attenuating the nuclease activity of the E. coli RecBCD enzyme. Cell 73, 87-96.
-
(1993)
Cell
, vol.73
, pp. 87-96
-
-
Dixon, D.A.1
Kowalczykowski, S.C.2
-
10
-
-
0031105945
-
Interactions between enteropathogenic Escherichia coli and host epithelial cells
-
Donnenberg, M. S., Kaper, J. B. & Finlay, B. B. (1997). Interactions between enteropathogenic Escherichia coli and host epithelial cells. Trends Microbiol 5, 109-114.
-
(1997)
Trends Microbiol
, vol.5
, pp. 109-114
-
-
Donnenberg, M.S.1
Kaper, J.B.2
Finlay, B.B.3
-
11
-
-
0031895930
-
The complete sequence of the locus of enterocyte effacement (LEE) from enteropathogenic Escherichia coli E2348/69
-
Elliott, S. J., Wainwright, L. A., McDaniel, T. K., Jarvis, K. G., Deng, Y. Y., Lai, L. C., McNamara, B. P., Donnenberg, M. S. & Kaper, J. B. (1998). The complete sequence of the locus of enterocyte effacement (LEE) from enteropathogenic Escherichia coli E2348/69. Mol Microbiol 28, 1-4.
-
(1998)
Mol Microbiol
, vol.28
, pp. 1-4
-
-
Elliott, S.J.1
Wainwright, L.A.2
McDaniel, T.K.3
Jarvis, K.G.4
Deng, Y.Y.5
Lai, L.C.6
McNamara, B.P.7
Donnenberg, M.S.8
Kaper, J.B.9
-
12
-
-
33744818176
-
Escherichia coli O157, somatic antigen is present in an isolate of E. fergusonii
-
Fegan, N., Barlow, R. & Gobius, K. (2006). Escherichia coli O157, somatic antigen is present in an isolate of E. fergusonii. Curr Microbiol 52, 482-486.
-
(2006)
Curr Microbiol
, vol.52
, pp. 482-486
-
-
Fegan, N.1
Barlow, R.2
Gobius, K.3
-
13
-
-
0028917144
-
Analysis of the pesticin receptor from Yersinia pestis: Role in iron-deficient growth and possible regulation by its siderophore
-
Fetherston, J. D., Lillard, J. W., Jr & Perry, R. D. (1995). Analysis of the pesticin receptor from Yersinia pestis: role in iron-deficient growth and possible regulation by its siderophore. J Bacteriol 177, 1824-1833.
-
(1995)
J Bacteriol
, vol.177
, pp. 1824-1833
-
-
Fetherston, J.D.1
Lillard Jr, J.W.2
Perry, R.D.3
-
14
-
-
0027956341
-
Nucleotide sequence analysis of enteropathogenic Escherichia coli (EPEC) adherence factor probe and development of PCR for rapid detection of EPEC harboring virulence plasmids
-
Franke, J., Franke, S., Schmidt, H., Schwarzkopf, A., Wieler, L., Baljer, G., Beutin, L. & Karch, H. (1994). Nucleotide sequence analysis of enteropathogenic Escherichia coli (EPEC) adherence factor probe and development of PCR for rapid detection of EPEC harboring virulence plasmids. J Clin Microbiol 32, 2460-2463.
-
(1994)
J Clin Microbiol
, vol.32
, pp. 2460-2463
-
-
Franke, J.1
Franke, S.2
Schmidt, H.3
Schwarzkopf, A.4
Wieler, L.5
Baljer, G.6
Beutin, L.7
Karch, H.8
-
15
-
-
8744295941
-
-
Garmendia, J., Phillips, A. D., Carlier, M. F., Chong, Y., Schüller, S., Marches, O., Dahan, S., Oswald, E., Shaw, R. K. & other authors (2004). TccP is an enterohaemorrhagic Escherichia coli O157:H7 type III effector protein that couples Tir to the actin-cytoskeleton. Cell Microbiol 6, 1169-1183.
-
Garmendia, J., Phillips, A. D., Carlier, M. F., Chong, Y., Schüller, S., Marches, O., Dahan, S., Oswald, E., Shaw, R. K. & other authors (2004). TccP is an enterohaemorrhagic Escherichia coli O157:H7 type III effector protein that couples Tir to the actin-cytoskeleton. Cell Microbiol 6, 1169-1183.
-
-
-
-
16
-
-
27744547895
-
-
Garmendia, J., Ren, Z., Tennant, S., Midolli Viera, M. A., Chong, Y., Whale, A., Azzopardi, K., Dahan, S., Sircili, M. P. & other authors (2005). Distribution of tccP in clinical enterohemorrhagic and enteropathogenic Escherichia coli isolates. J Clin Microbiol 43, 5715-5720.
-
Garmendia, J., Ren, Z., Tennant, S., Midolli Viera, M. A., Chong, Y., Whale, A., Azzopardi, K., Dahan, S., Sircili, M. P. & other authors (2005). Distribution of tccP in clinical enterohemorrhagic and enteropathogenic Escherichia coli isolates. J Clin Microbiol 43, 5715-5720.
-
-
-
-
17
-
-
30744432410
-
Association of virulence genotype with phylogenetic background in comparison to different seropathotypes of Shiga toxin-producing Escherichia coli isolates
-
Girardeau, J. P., Dalmasso, A., Bertin, Y., Ducrot. C., Bord, S., Livrelli, V., Vernozy-Rozand, C. & Martin, C. (2005). Association of virulence genotype with phylogenetic background in comparison to different seropathotypes of Shiga toxin-producing Escherichia coli isolates. J Clin Microbiol 43, 6098-6107.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 6098-6107
-
-
Girardeau, J.P.1
Dalmasso, A.2
Bertin, Y.3
Ducrot, C.4
Bord, S.5
Livrelli, V.6
Vernozy-Rozand, C.7
Martin, C.8
-
18
-
-
0034842129
-
Enteropathogenic E. coli Tir binds Nck to initiate actin pedestal formation in host-cells
-
Gruenheld, S, DeVinney, R, Bladt, F., Goosney, D, Gelkop, S., Gish, G., Pawson, T. & Finlay B.(2001). Enteropathogenic E. coli Tir binds Nck to initiate actin pedestal formation in host-cells. Nat Cell Biol 3, 856-859.
-
(2001)
Nat Cell Biol
, vol.3
, pp. 856-859
-
-
Gruenheld, S.1
DeVinney, R.2
Bladt, F.3
Goosney, D.4
Gelkop, S.5
Gish, G.6
Pawson, T.7
Finlay, B.8
-
19
-
-
0028942973
-
Identification of enteropathogenic Esckerichia coli by PCR-based detection of the bundle-forming pilus gene
-
Gunzburg, S. T., Tornleporth, N. G. & Riley, L W. (1995). Identification of enteropathogenic Esckerichia coli by PCR-based detection of the bundle-forming pilus gene. J Clin Microbiol 33, 1375-1377.
-
(1995)
J Clin Microbiol
, vol.33
, pp. 1375-1377
-
-
Gunzburg, S.T.1
Tornleporth, N.G.2
Riley, L.W.3
-
20
-
-
29144536838
-
Molecular analysis of the O-antigen gene cluster of Escherichia coli O86: 137 and characterization of the chain length determinant gene (wzz)
-
Guo, H., Yi, W., Shao, J, Lu,.Y., Zhang, W., Song, J. & Wang, P. (2005). Molecular analysis of the O-antigen gene cluster of Escherichia coli O86: 137 and characterization of the chain length determinant gene (wzz). Appl Environ Microbiol 71, 7995-8001.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 7995-8001
-
-
Guo, H.1
Yi, W.2
Shao, J.3
Lu, Y.4
Zhang, W.5
Song, J.6
Wang, P.7
-
21
-
-
0035961748
-
Complete genome sequence of enterohemorrhagic Escherichia coli O157: H7 and genomic comparison with a laboratory strain K-12
-
Hayashi, T., Makino, K., Ohnishi, M, Kurokawa, K, Ishli, K., Yokoyama, K, Han, C. G., Ohtsubo, E., Nakayama, K & other authors (2001). Complete genome sequence of enterohemorrhagic Escherichia coli O157: H7 and genomic comparison with a laboratory strain K-12. DNA Res 8, 11-22.
-
(2001)
DNA Res
, vol.8
, pp. 11-22
-
-
Hayashi, T.1
Makino, K.2
Ohnishi, M.3
Kurokawa, K.4
Ishli, K.5
Yokoyama, K.6
Han, C.G.7
Ohtsubo, E.8
Nakayama, K.9
-
22
-
-
11844292055
-
Evolutioinary genetics; of a new pathogenic Escherichia species: Escherichia albertii and related Shigella boydii Strains
-
Hyma, K. E, Lacher, D. W., Nelson, A. M., Bumbaugh, A. C., Janda, J. M., Strockbine, N, A., Young, V. B. & Whittam, T. S. (2005). Evolutioinary genetics; of a new pathogenic Escherichia species: Escherichia albertii and related Shigella boydii Strains. J Bacteriol 187, 619-628.
-
(2005)
J Bacteriol
, vol.187
, pp. 619-628
-
-
Hyma, K.E.1
Lacher, D.W.2
Nelson, A.M.3
Bumbaugh, A.C.4
Janda, J.M.5
Strockbine, N.A.6
Young, V.B.7
Whittam, T.S.8
-
23
-
-
33845722259
-
O side chain deficiency enhances sensitivity of Escherichia coli to Shiga toxin 2-converting bacteriophages
-
Iguchi, A., Iyoda, S, Watanabe, H. & Osawa, R. (2007). O side chain deficiency enhances sensitivity of Escherichia coli to Shiga toxin 2-converting bacteriophages. Curr Microbiol 54, 14-19.
-
(2007)
Curr Microbiol
, vol.54
, pp. 14-19
-
-
Iguchi, A.1
Iyoda, S.2
Watanabe, H.3
Osawa, R.4
-
24
-
-
0031987893
-
Enterohemorrhagic Escherichia coli
-
Kaper, J. B. (1998). Enterohemorrhagic Escherichia coli. Curr Opin Microbiol 1, 103-108.
-
(1998)
Curr Opin Microbiol
, vol.1
, pp. 103-108
-
-
Kaper, J.B.1
-
25
-
-
0027195610
-
-
Karch, H, Bohm, H, Schmidt H., Gunzer, F, Aleksic, S. & Heesemann, J. (1993) Clonal structure-and pathogenicity of Shiga-like toxin-producing, sorbitol-fermenting Escherichia coli O157:H. J Clin Microblol 31, 1200-1205.
-
Karch, H, Bohm, H, Schmidt H., Gunzer, F, Aleksic, S. & Heesemann, J. (1993) Clonal structure-and pathogenicity of Shiga-like toxin-producing, sorbitol-fermenting Escherichia coli O157:H. J Clin Microblol 31, 1200-1205.
-
-
-
-
26
-
-
0033002855
-
Phosphorylation of tyrosine 474 of the enteropathogenic Escherichia coli (EPEC Tir receptor molecule is essential for actin nucleating activity and is preceded by additional host modifications
-
Kenny, B. (1999). Phosphorylation of tyrosine 474 of the enteropathogenic Escherichia coli (EPEC Tir receptor molecule is essential for actin nucleating activity and is preceded by additional host modifications. Mol Microbiol 31, 1229-1241.
-
(1999)
Mol Microbiol
, vol.31
, pp. 1229-1241
-
-
Kenny, B.1
-
27
-
-
0037195198
-
Improved analytical methods for microarray-based genome-composition analysis
-
RESEARCH0065
-
Kim, C. C., Joyce, E. A., Chan, K & Falkow, S. (2002). Improved analytical methods for microarray-based genome-composition analysis. Genome Biol 3, RESEARCH0065.
-
(2002)
Genome Biol
, vol.3
-
-
Kim, C.C.1
Joyce, E.A.2
Chan, K.3
Falkow, S.4
-
28
-
-
3242810318
-
MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment
-
Kumar, S., Tamura, K & Nei, M. (2004). MEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 5, 150-163.
-
(2004)
Brief Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
29
-
-
33745726446
-
Allelic subtyping of the intimin locus (eae) of pathogenic Escherichia coli by fluorescent RFLP
-
Lacher, D. W., Steinsland, H. & Whittam, T. S. (2006). Allelic subtyping of the intimin locus (eae) of pathogenic Escherichia coli by fluorescent RFLP. FEMS Microbiol Lett 261, 80-87.
-
(2006)
FEMS Microbiol Lett
, vol.261
, pp. 80-87
-
-
Lacher, D.W.1
Steinsland, H.2
Whittam, T.S.3
-
30
-
-
0032482924
-
Molecular archaeology of the Escherichia coli genome
-
Lawrence, J. G. & Ochman, H. (1998). Molecular archaeology of the Escherichia coli genome. Proc Natl Acad Sci U S A 95, 9413-9417.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 9413-9417
-
-
Lawrence, J.G.1
Ochman, H.2
-
31
-
-
0032902128
-
Molecular evolution and mosaic structure of alpha, beta, and gamma intimins of pathogenic Escherichia coli
-
McGraw, E. A., Li, J., Selander, R. K. & Whittam, T. S. (1999). Molecular evolution and mosaic structure of alpha, beta, and gamma intimins of pathogenic Escherichia coli. Mol Biol Evol 16, 12-22.
-
(1999)
Mol Biol Evol
, vol.16
, pp. 12-22
-
-
McGraw, E.A.1
Li, J.2
Selander, R.K.3
Whittam, T.S.4
-
32
-
-
0032998631
-
The Per regulon of enteropathogenic Escherichia coli: Identification of a regulatory cascade and a novel transcriptional activator, the locus of enterocyte effacement (LEE)-encoded regulator (Ler)
-
Mellies, J. L., Elliott S. J., Sperandio, V., Donnenberg, M. S. & Kaper, J. B. (1999). The Per regulon of enteropathogenic Escherichia coli: identification of a regulatory cascade and a novel transcriptional activator, the locus of enterocyte effacement (LEE)-encoded regulator (Ler). Mol Microbiol 33, 296-306.
-
(1999)
Mol Microbiol
, vol.33
, pp. 296-306
-
-
Mellies, J.L.1
Elliott, S.J.2
Sperandio, V.3
Donnenberg, M.S.4
Kaper, J.B.5
-
33
-
-
0030957827
-
The evolution of epidemic Vibrio cholerae strains
-
Mooi, F. R. & Bik, E. M. (1997). The evolution of epidemic Vibrio cholerae strains. Trends Microbiol 5, 161-165.
-
(1997)
Trends Microbiol
, vol.5
, pp. 161-165
-
-
Mooi, F.R.1
Bik, E.M.2
-
34
-
-
33645214751
-
Altering the length of the lipopolysaccharide O antigen has an impact on the interaction of Salmonella enterica serovar Typhimurium with macrophages and complement
-
Murray, G. L., Attridge, S. R. & Morona, R. (2006). Altering the length of the lipopolysaccharide O antigen has an impact on the interaction of Salmonella enterica serovar Typhimurium with macrophages and complement. J Bacteriol 188, 2735-2739.
-
(2006)
J Bacteriol
, vol.188
, pp. 2735-2739
-
-
Murray, G.L.1
Attridge, S.R.2
Morona, R.3
-
35
-
-
0031984684
-
Diarrheagenic Escherichia coli
-
Nataro, J. P. & Kaper, J. B. (1998). Diarrheagenic Escherichia coli. Clin Microbiol Rev 11, 142-201.
-
(1998)
Clin Microbiol Rev
, vol.11
, pp. 142-201
-
-
Nataro, J.P.1
Kaper, J.B.2
-
36
-
-
0027933197
-
AggR, a transcriptional activator of aggregative adherence fimbria I expression in enteroaggregative Escherichia coli
-
Nataro, J. P., Yikang, D., Yingkang, D. & Walker, K. (1994). AggR, a transcriptional activator of aggregative adherence fimbria I expression in enteroaggregative Escherichia coli. J Bacteriol 176, 4691-4699.
-
(1994)
J Bacteriol
, vol.176
, pp. 4691-4699
-
-
Nataro, J.P.1
Yikang, D.2
Yingkang, D.3
Walker, K.4
-
37
-
-
0027218991
-
Sequence and mapping of the aroA gene of Staphylococcus aureus 8325-4
-
O'Connell, C., Pattee, P. A. & Foster, T. J. (1993). Sequence and mapping of the aroA gene of Staphylococcus aureus 8325-4. J Gen Microbiol 139, 1449-1460.
-
(1993)
J Gen Microbiol
, vol.139
, pp. 1449-1460
-
-
O'Connell, C.1
Pattee, P.A.2
Foster, T.J.3
-
38
-
-
33744922108
-
Complexity of the genomic diversity in enterohemorrhagic Escherichia coli O157 revealed by the combinational use of the O157 Sakai OligoDNA microarray and the whole genome PCR scanning
-
Ogura, Y., Kurokawa, K., Ooka, T., Tahiro, K., Tobe, T., Ohnishi, M., Nakayama, K., Morimoto, T., Terajima, J. & other authors (2006). Complexity of the genomic diversity in enterohemorrhagic Escherichia coli O157 revealed by the combinational use of the O157 Sakai OligoDNA microarray and the whole genome PCR scanning. DNA Res 13, 3-14.
-
(2006)
DNA Res
, vol.13
, pp. 3-14
-
-
Ogura, Y.1
Kurokawa, K.2
Ooka, T.3
Tahiro, K.4
Tobe, T.5
Ohnishi, M.6
Nakayama, K.7
Morimoto, T.8
Terajima, J.9
-
39
-
-
33846785049
-
TccP2 of O157:H7 and non-O157 enterohemorrhagic Escherichia coli (EHEC): Challenging the dogma of EHEC-induced actin polymerization
-
Ogura, Y., Ooka, T., Whale, A., Garmendia, J., Beutin, L., Tennant, S., Krause, G., Morabito, S., Chinen, I. & other authors (2007). TccP2 of O157:H7 and non-O157 enterohemorrhagic Escherichia coli (EHEC): challenging the dogma of EHEC-induced actin polymerization. Infect Immun 75, 604-612.
-
(2007)
Infect Immun
, vol.75
, pp. 604-612
-
-
Ogura, Y.1
Ooka, T.2
Whale, A.3
Garmendia, J.4
Beutin, L.5
Tennant, S.6
Krause, G.7
Morabito, S.8
Chinen, I.9
-
40
-
-
0037168552
-
Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning
-
Ohnishi, M., Terajima, J., Kurokawa, K., Nakayama, K., Murata, T., Tamura, K., Ogura, Y., Watanabe, H. & Hayashi, T. (2002). Genomic diversity of enterohemorrhagic Escherichia coli O157 revealed by whole genome PCR scanning. Proc Natl Acad Sci U S A 99, 17043-17048.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 17043-17048
-
-
Ohnishi, M.1
Terajima, J.2
Kurokawa, K.3
Nakayama, K.4
Murata, T.5
Tamura, K.6
Ogura, Y.7
Watanabe, H.8
Hayashi, T.9
-
41
-
-
34247869919
-
Characterization of tccP2 carried by atypical enteropathogenic Escherichia coli
-
Ooka, T., Vieira, M., Ogura, Y., Beutin, L., La Ragione, R., van Diemen, P. M., Stevens, M. P., Aktan, I., Cawthraw, S. & other authors (2007). Characterization of tccP2 carried by atypical enteropathogenic Escherichia coli. FEMS Microbiol Lett 271, 126-135.
-
(2007)
FEMS Microbiol Lett
, vol.271
, pp. 126-135
-
-
Ooka, T.1
Vieira, M.2
Ogura, Y.3
Beutin, L.4
La Ragione, R.5
van Diemen, P.M.6
Stevens, M.P.7
Aktan, I.8
Cawthraw, S.9
-
42
-
-
0031004145
-
Evolutionary relationships among pathogenic and nonpathogenic Escherichia coli strains inferred from multilocus enzyme electrophoresis and mdh sequence studies
-
Pupo, G. M., Karaolis, D. K., Lan, R. & Reeves, P. R. (1997). Evolutionary relationships among pathogenic and nonpathogenic Escherichia coli strains inferred from multilocus enzyme electrophoresis and mdh sequence studies. Infect Immun 65, 2685-2692.
-
(1997)
Infect Immun
, vol.65
, pp. 2685-2692
-
-
Pupo, G.M.1
Karaolis, D.K.2
Lan, R.3
Reeves, P.R.4
-
43
-
-
0242677627
-
Distribution of intimin subtypes among Escherichia coli isolates from ruminant and human sources
-
Ramachandran, V., Brett, K., Hornitzky, M., Dowton, M., Bettelheim, K., Walker, M. & Djordjevic, S. (2003). Distribution of intimin subtypes among Escherichia coli isolates from ruminant and human sources. J Clin Microbiol 41, 5022-5032.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 5022-5032
-
-
Ramachandran, V.1
Brett, K.2
Hornitzky, M.3
Dowton, M.4
Bettelheim, K.5
Walker, M.6
Djordjevic, S.7
-
44
-
-
0030464649
-
Bacterial polysaccharide synthesis and gene nomenclature
-
Reeves, P. R., Hobbs, M., Valvano, M. A., Skurnik, M., Whitfield, C., Coplin, D., Kido, N., Klena, J., Maskell, D. & other authors (1996). Bacterial polysaccharide synthesis and gene nomenclature. Trends Microbiol 4, 495-503.
-
(1996)
Trends Microbiol
, vol.4
, pp. 495-503
-
-
Reeves, P.R.1
Hobbs, M.2
Valvano, M.A.3
Skurnik, M.4
Whitfield, C.5
Coplin, D.6
Kido, N.7
Klena, J.8
Maskell, D.9
-
45
-
-
0034612502
-
Parallel evolution of virulence in pathogenic Escherichia coli
-
Reid, S. D., Herbelin, C. J., Bumbaugh, A. C., Selander, R. K. & Whittam, T. S. (2000). Parallel evolution of virulence in pathogenic Escherichia coli. Nature 406, 64-67.
-
(2000)
Nature
, vol.406
, pp. 64-67
-
-
Reid, S.D.1
Herbelin, C.J.2
Bumbaugh, A.C.3
Selander, R.K.4
Whittam, T.S.5
-
46
-
-
9444225935
-
Java TreeView - extensible visualization of microarray data
-
Saldanha, A. J. (2004). Java TreeView - extensible visualization of microarray data. Bioinformatics 20, 3246-3248.
-
(2004)
Bioinformatics
, vol.20
, pp. 3246-3248
-
-
Saldanha, A.J.1
-
47
-
-
11144252647
-
Designation of O174 and O175 to temporary O groups OX3 and OX7, and six new E. coli O groups that include Verocytotoxin-producing E. coli (VTEC): O176, O177, O178, O179, O180 and O181
-
Scheutz, F., Cheasty, T., Woodward, D. & Smith, H. (2004). Designation of O174 and O175 to temporary O groups OX3 and OX7, and six new E. coli O groups that include Verocytotoxin-producing E. coli (VTEC): O176, O177, O178, O179, O180 and O181. APMIS 112, 569-584.
-
(2004)
APMIS
, vol.112
, pp. 569-584
-
-
Scheutz, F.1
Cheasty, T.2
Woodward, D.3
Smith, H.4
-
48
-
-
0027442486
-
Virulence determinants in nontoxinogenic Escherichia coli O157 strains that cause infantile diarrhea
-
Schmidt, H., Russmann, H. & Karch, H. (1993). Virulence determinants in nontoxinogenic Escherichia coli O157 strains that cause infantile diarrhea. Infect Immun 61, 4894-4898.
-
(1993)
Infect Immun
, vol.61
, pp. 4894-4898
-
-
Schmidt, H.1
Russmann, H.2
Karch, H.3
-
49
-
-
0031883473
-
Prevalence of the "high-pathogenicity island" of Yersinia species among Escherichia coli strains that are pathogenic to humans
-
Schubert, S., Rakin, A., Karch, H., Carniel, E. & Heesemann, J. (1998). Prevalence of the "high-pathogenicity island" of Yersinia species among Escherichia coli strains that are pathogenic to humans. Infect Immun 66, 480-485.
-
(1998)
Infect Immun
, vol.66
, pp. 480-485
-
-
Schubert, S.1
Rakin, A.2
Karch, H.3
Carniel, E.4
Heesemann, J.5
-
50
-
-
0030917876
-
Vibrio cholerae serotype O139: Swapping genes for surface polysaccharide biosynthesis
-
Stroeher, U. H. & Manning, P. A. (1997). Vibrio cholerae serotype O139: swapping genes for surface polysaccharide biosynthesis. Trends Microbiol 5, 178-180.
-
(1997)
Trends Microbiol
, vol.5
, pp. 178-180
-
-
Stroeher, U.H.1
Manning, P.A.2
-
51
-
-
0032570009
-
Genetic organization of the regions associated with surface polysaccharide synthesis in Vibrio cholerae O1, O139 and Vibrio anguillarum O1 and O2: A review
-
Stroeher, U. H., Jedani, K. E. & Manning, P. A. (1998). Genetic organization of the regions associated with surface polysaccharide synthesis in Vibrio cholerae O1, O139 and Vibrio anguillarum O1 and O2: a review. Gene 223, 269-282.
-
(1998)
Gene
, vol.223
, pp. 269-282
-
-
Stroeher, U.H.1
Jedani, K.E.2
Manning, P.A.3
-
52
-
-
0031946778
-
Generation of Escherichia coli O9a serotype, a subtype of E. coli O9, by transfer of the wb* gene cluster of Klebsiella O3 into E. coli via recombination
-
Sugiyama, T., Kido, N., Kato, Y., Koide, N., Yoshida, T. & Yokochi, T. (1998). Generation of Escherichia coli O9a serotype, a subtype of E. coli O9, by transfer of the wb* gene cluster of Klebsiella O3 into E. coli via recombination. J Bacteriol 180, 2775-2778.
-
(1998)
J Bacteriol
, vol.180
, pp. 2775-2778
-
-
Sugiyama, T.1
Kido, N.2
Kato, Y.3
Koide, N.4
Yoshida, T.5
Yokochi, T.6
-
53
-
-
0036136330
-
Molecular evolution of the intimin gene in O111 clones of pathogenic Esherichia coli
-
Tarr, C. L. & Whittam, T. S. (2002). Molecular evolution of the intimin gene in O111 clones of pathogenic Esherichia coli. J Bacteriol 184, 479-487.
-
(2002)
J Bacteriol
, vol.184
, pp. 479-487
-
-
Tarr, C.L.1
Whittam, T.S.2
-
54
-
-
0027968068
-
CLUSTALS W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTALS W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
55
-
-
0036095923
-
Typical and atypical enteropathogenic Escherichia coli
-
Trabulsi, L. R., Keller, R. & Tardelli Gomes, T. A. (2002). Typical and atypical enteropathogenic Escherichia coli. Emerg Infect Dis 8, 508-513.
-
(2002)
Emerg Infect Dis
, vol.8
, pp. 508-513
-
-
Trabulsi, L.R.1
Keller, R.2
Tardelli Gomes, T.A.3
-
56
-
-
0034016260
-
Sequence diversity of the Escherichia coli H7 fliC genes: Implication for a DNA-based typing scheme for E. coli O157:H7
-
Wang, L., Rothemund, D., Curd, H. & Reeves, P. (2000). Sequence diversity of the Escherichia coli H7 fliC genes: implication for a DNA-based typing scheme for E. coli O157:H7. J Clin Microbiol 38, 1786-1790.
-
(2000)
J Clin Microbiol
, vol.38
, pp. 1786-1790
-
-
Wang, L.1
Rothemund, D.2
Curd, H.3
Reeves, P.4
-
57
-
-
0036235620
-
The O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase gene
-
Wang, L., Huskic, S., Cisterne, A., Rothemund, D. & Reeves, P. (2002). The O-antigen gene cluster of Escherichia coli O55:H7 and identification of a new UDP-GlcNAc C4 epimerase gene. J Bacteriol 184, 2620-2625.
-
(2002)
J Bacteriol
, vol.184
, pp. 2620-2625
-
-
Wang, L.1
Huskic, S.2
Cisterne, A.3
Rothemund, D.4
Reeves, P.5
-
58
-
-
20044379025
-
Optimization of virulence functions through glucosylation of Shigella LPS
-
West, N. P., Sansonetti, P., Mounier, J., Exley, R. M., Parsot, C., Guadagnini, S., Prévost, M. C., Prochnicka-Chalufour, A., Delepierre, M. & other authors (2005). Optimization of virulence functions through glucosylation of Shigella LPS. Science 307, 1313-1317.
-
(2005)
Science
, vol.307
, pp. 1313-1317
-
-
West, N.P.1
Sansonetti, P.2
Mounier, J.3
Exley, R.M.4
Parsot, C.5
Guadagnini, S.6
Prévost, M.C.7
Prochnicka-Chalufour, A.8
Delepierre, M.9
-
59
-
-
0027255691
-
Clonal relationships among Escherichia coli strains that cause hemorrhagic colitis and infantile diarrhea
-
Whittam, T. S., Wolfe, M. L., Wachsmuth, I. K., Orskov, F., Orskov, I. & Wilson, R. A. (1993). Clonal relationships among Escherichia coli strains that cause hemorrhagic colitis and infantile diarrhea. Infect Immun 61, 1619-1629.
-
(1993)
Infect Immun
, vol.61
, pp. 1619-1629
-
-
Whittam, T.S.1
Wolfe, M.L.2
Wachsmuth, I.K.3
Orskov, F.4
Orskov, I.5
Wilson, R.A.6
-
60
-
-
14244251962
-
Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7
-
Wick, L. M., Oi, W., Lacher, D. W. & Whittam, T. S. (2005). Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7. J Bacteriol 187, 1783-1791.
-
(2005)
J Bacteriol
, vol.187
, pp. 1783-1791
-
-
Wick, L.M.1
Oi, W.2
Lacher, D.W.3
Whittam, T.S.4
-
61
-
-
0028321452
-
Molecular analysis of the rfb gene cluster of a group D2 Salmonella enterica strain: Evidence for its origin from an insertion sequence-mediated recombination event between group E and D1 strains
-
Xiang, S. H., Hobbs, M. & Reeves, P. R. (1994). Molecular analysis of the rfb gene cluster of a group D2 Salmonella enterica strain: evidence for its origin from an insertion sequence-mediated recombination event between group E and D1 strains. J Bacteriol 176, 4357-4365.
-
(1994)
J Bacteriol
, vol.176
, pp. 4357-4365
-
-
Xiang, S.H.1
Hobbs, M.2
Reeves, P.R.3
-
62
-
-
0031060096
-
Detection and sequences of the enteroaggregative Escherichia coli heat-stable enterotoxin 1 gene in enterotoxigenic E. coli strains isolated from piglets and calves with diarrhea
-
Yamamoto, T. & Nakazawa, M. (1997). Detection and sequences of the enteroaggregative Escherichia coli heat-stable enterotoxin 1 gene in enterotoxigenic E. coli strains isolated from piglets and calves with diarrhea. J Clin Microbiol 35, 223-227.
-
(1997)
J Clin Microbiol
, vol.35
, pp. 223-227
-
-
Yamamoto, T.1
Nakazawa, M.2
|