Recent diversity of human immunodeficiency virus type 1 in individuals who visited sexually transmitted infection-related clinics in Osaka, Japan

Journal of Infection and Chemotherapy

Volumn 14, Issue 1, 2008, Pages 51-55

  Kojima, Yoko ^a   Kawahata, Takuya ^a   Mori, Haruyo ^a   Oishi, Isao ^b   Otake, Toru ^a  

^a OSAKA PREFECTURAL INSTITUTE OF PUBLIC HEALTH   (Japan)

^b Otemae College of Nutrition and Confectionery   (Japan)

Author keywords

Diversity; High risk group; Human immunodeficiency virus type 1 (HIV 1); Sexually transmitted infection (STI)

Indexed keywords

AMINO ACID; HUMAN IMMUNODEFICIENCY VIRUS ANTIBODY;

ANTIBODY SCREENING; ARTICLE; ENVELOPE GENE; FEMALE; GENE DELETION; GENE SEQUENCE; GENETIC VARIABILITY; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1; JAPAN; MAJOR CLINICAL STUDY; MALE; MUTANT; NUCLEOTIDE SEQUENCE; OUTPATIENT DEPARTMENT; SEXUAL BEHAVIOR; SEXUALLY TRANSMITTED DISEASE; STRUCTURAL GENE; VIRUS CARRIER;

EID: 39749159089     PISSN: 1341321X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10156-007-0579-7     Document Type: Article

References (13)

1. S. Subbarao S. Vanichseni D.J. Hu D. Kitayaporn K. Choopanya S. Raktham Genetic characterization of incident HIV type 1 subtype E and B strains from a prospective cohort of injecting drug users in Bangkok, Thailand AIDS Res Hum Retroviruses 16 2000 699 707 10.1089/088922200308693
2. M. Reinis M. Bruckova R.R. Graham J. Vandasova M. Stankova J.K. Carr Genetic subtypes of HIV type 1 viruses circulating in the Czech Republic AIDS Res Hum Retroviruses 17 2001 1305 1310 10.1089/088922201750461384
3. F.E. McCutchan Understanding the genetic diversity of HIV-1 AIDS 14 suppl3 2000 S31 S44
4. F. Gao L. Yue S. Craig C.L. Thornton D.L. Robertson F.E. McCutchan Genetic variation of HIV type 1 in four World Health Organization-sponsored vaccine evaluation sites: generation of functional envelope (glycoprotein 160) clones representative of sequence subtypes A, B, C, and E. WHO Network for HIV Isolation and Characterization AIDS Res Hum Retroviruses 10 1994 1359 1368 10.1089/aid.1994.10.1359
5. J.M. Coffin HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy Science 267 1995 483 489 10.1126/science.7824947
6. F.E. McCutchan P.A. Hegerich T.P. Brennan P. Phanuphak P. Singharaj A. Jugsudee Genetic variants of HIV-1 in Thailand AIDS Res Hum Retroviruses 8 1992 1887 1895
7. J. Chen N.L. Young S. Subbarao P. Warachit S. Saguanwongse S. Wongsheree HIV type 1 subtypes in Guangxi Province, China, 1996 AIDS Res Hum Retroviruses 15 1999 81 84 10.1089/088922299311754
8. J.D. Thompson Higgins T.J. Gibson CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res 22 1994 4673 4680 10.1093/nar/22.22.4673
9. K.E. Robbins P. Lemey O.G. Pybus H.W. Jaffe A.S. Youngpairoj T.M. Brown U.S. human immunodeficiency virus type 1 epidemic: date of origin, population history, and characterization of early strains J Virol 77 2003 6359 6366 10.1128/JVI.77.11.6359-6366.2003
10. J.A. Berzofsky Development of artificial vaccines against HIV using defined epitopes FASEB Lett 5 1991 2412 2418
11. L.G. Kostrikis E. Bagdades Y. Cao L. Zhang D. Dimitriou D.D. Ho Genetic analysis of human immunodeficiency virus type 1 strains from patients in Cyprus: identification of a new subtype designated subtype I J Virol 69 1995 6122 6130
12. M. Morimoto T. Otake H. Mori T. Kawahata N. Ueba S. Okubo Prognosis and evaluation of drug therapy by V3 and RT gene analysis of HIV-1 Kansenshogaku Zasshi 70 1996 347 353
13. A. Caumont N.T. Lan N.T. Uyen P.V. Hung E. Schvoerer M.S. Urriza Sequence analysis of env C2/V3, gag p17/p24, and pol protease regions of 25 HIV type 1 isolates from Ho Chi Minh City, Vietnam AIDS Res Hum Retroviruses 17 2001 1285 1291 10.1089/088922201750461357