-
1
-
-
0001972373
-
Recovery of bacterial cells from soil
-
van Elsas J.D., and Trevors J.T. (Eds), Springer Verlag, Heidelberg
-
Bakken L.R., and Lindahl V. Recovery of bacterial cells from soil. In: van Elsas J.D., and Trevors J.T. (Eds). Nucleic Acids in the Environment: Methods and Applications (1995), Springer Verlag, Heidelberg 9-27
-
(1995)
Nucleic Acids in the Environment: Methods and Applications
, pp. 9-27
-
-
Bakken, L.R.1
Lindahl, V.2
-
3
-
-
0030930388
-
Use of rhizosphere carbon sources in sole carbon source tests to discriminate soil microbial communities
-
Campbell C.D., Grayston S.J., and Hirst D.J. Use of rhizosphere carbon sources in sole carbon source tests to discriminate soil microbial communities. J. Microbiol. Methods 30 (1997) 33-41
-
(1997)
J. Microbiol. Methods
, vol.30
, pp. 33-41
-
-
Campbell, C.D.1
Grayston, S.J.2
Hirst, D.J.3
-
4
-
-
0038315527
-
A rapid microtiter plate method to measure carbon dioxide evolved from carbon amendments so as to determine the physiological profiles of soil microbial communities by using whole soil
-
Campbell C.D., Chapman S.J., Cameron C.M., Davidson M.S., and Potts J.M. A rapid microtiter plate method to measure carbon dioxide evolved from carbon amendments so as to determine the physiological profiles of soil microbial communities by using whole soil. Appl. Environ. Microbiol. 69 (2003) 3593-3599
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 3593-3599
-
-
Campbell, C.D.1
Chapman, S.J.2
Cameron, C.M.3
Davidson, M.S.4
Potts, J.M.5
-
5
-
-
0032899941
-
Comparison of two kinds of Biolog microplates (GN and ECO) in their ability to distinguish among aquatic microbial communities
-
Choi K.H., and Dobbs F.C. Comparison of two kinds of Biolog microplates (GN and ECO) in their ability to distinguish among aquatic microbial communities. J. Microbiol. Methods 36 (1999) 203-213
-
(1999)
J. Microbiol. Methods
, vol.36
, pp. 203-213
-
-
Choi, K.H.1
Dobbs, F.C.2
-
6
-
-
0038059089
-
Community-level physiological profiles of bacteria and fungi: plate type and incubation temperature influences on contrasting soils
-
Classen A.T., Boyle S.I., Haskins K.E., Overby S.T., and Hart S.C. Community-level physiological profiles of bacteria and fungi: plate type and incubation temperature influences on contrasting soils. FEMS Microbiol. Ecol. 44 (2003) 319-328
-
(2003)
FEMS Microbiol. Ecol.
, vol.44
, pp. 319-328
-
-
Classen, A.T.1
Boyle, S.I.2
Haskins, K.E.3
Overby, S.T.4
Hart, S.C.5
-
7
-
-
0031795638
-
Functional diversity and community structure of microorganisms in uncontaminated and creosote-contaminated soils as determined by sole-carbon-source-utilization
-
Derry A.M., Staddon W.J., and Trevors J.T. Functional diversity and community structure of microorganisms in uncontaminated and creosote-contaminated soils as determined by sole-carbon-source-utilization. World J. Microbiol. Biotechnol. 14 (1998) 571-578
-
(1998)
World J. Microbiol. Biotechnol.
, vol.14
, pp. 571-578
-
-
Derry, A.M.1
Staddon, W.J.2
Trevors, J.T.3
-
8
-
-
0032937671
-
Comparison of parental and transgenic alfalfa rhizosphere bacterial communities using Biolog GN metabolic fingerprint and enterobacterial repetitive intergenic consensus sequence PCR (ERIC-PCR)
-
Di Giovanni G.D., Watrud L.S., Seidler R.J., and Widmer F. Comparison of parental and transgenic alfalfa rhizosphere bacterial communities using Biolog GN metabolic fingerprint and enterobacterial repetitive intergenic consensus sequence PCR (ERIC-PCR). Microb. Ecol. 37 (1999) 129-139
-
(1999)
Microb. Ecol.
, vol.37
, pp. 129-139
-
-
Di Giovanni, G.D.1
Watrud, L.S.2
Seidler, R.J.3
Widmer, F.4
-
9
-
-
0033025914
-
Effects of phenylurea herbicides on soil microbial communities estimated by analysis of 16S rRNA gene fingerprints and community-level physiological profiles
-
El Fantroussi S., Verschuere L., Verstraete W., and Top E.M. Effects of phenylurea herbicides on soil microbial communities estimated by analysis of 16S rRNA gene fingerprints and community-level physiological profiles. Appl. Environ. Microbiol. 65 (1999) 982-988
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 982-988
-
-
El Fantroussi, S.1
Verschuere, L.2
Verstraete, W.3
Top, E.M.4
-
10
-
-
0025919424
-
Classification and characterisation of heterotrophic microbial communities on the basis or patterns of community level sole carbon source utilization
-
Garland J.L., and Mills A. Classification and characterisation of heterotrophic microbial communities on the basis or patterns of community level sole carbon source utilization. Appl. Environ. Microbiol. 57 (1991) 2351-2359
-
(1991)
Appl. Environ. Microbiol.
, vol.57
, pp. 2351-2359
-
-
Garland, J.L.1
Mills, A.2
-
11
-
-
0032724937
-
Dilution/extinction of community phenotypic characters to estimate relative structural diversity in mixed communities
-
Garland J.L., and Lehman R.M. Dilution/extinction of community phenotypic characters to estimate relative structural diversity in mixed communities. FEMS Microbiol. Ecol. 30 (1999) 333-343
-
(1999)
FEMS Microbiol. Ecol.
, vol.30
, pp. 333-343
-
-
Garland, J.L.1
Lehman, R.M.2
-
12
-
-
0037882254
-
Community-level physiological profiling performed with and oxygen-sensitive fluorophore in a Microtiter plate
-
Garland J.L., Roberts M.S., Levine L.H., and Mills A.L. Community-level physiological profiling performed with and oxygen-sensitive fluorophore in a Microtiter plate. Appl. Environ. Microbiol. 69 (2003) 2994-2998
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 2994-2998
-
-
Garland, J.L.1
Roberts, M.S.2
Levine, L.H.3
Mills, A.L.4
-
13
-
-
33645052217
-
Microbial community structure at different depths in disturbed and undisturbed semiarid Mediterranean forest soils
-
Goberna M., Insam H., Klammer S., Pascual J.A., and Sanchez J. Microbial community structure at different depths in disturbed and undisturbed semiarid Mediterranean forest soils. Microb. Ecol. 50 (2005) 315-326
-
(2005)
Microb. Ecol.
, vol.50
, pp. 315-326
-
-
Goberna, M.1
Insam, H.2
Klammer, S.3
Pascual, J.A.4
Sanchez, J.5
-
14
-
-
1842583023
-
Reproducibility in the response of soil bacterial community-level physiological profiles from land use intensification gradient
-
Gomez E., Garland J., and Monti M. Reproducibility in the response of soil bacterial community-level physiological profiles from land use intensification gradient. Appl. Soil Ecol. 26 (2004) 21-30
-
(2004)
Appl. Soil Ecol.
, vol.26
, pp. 21-30
-
-
Gomez, E.1
Garland, J.2
Monti, M.3
-
15
-
-
0032890117
-
Soil microbial community structure: effects of substrate loading rates
-
Griffiths B.S., Ritz K., Ebblewhite N., and Dobson G. Soil microbial community structure: effects of substrate loading rates. Soil Biol. Biochem. 31 (1999) 145-153
-
(1999)
Soil Biol. Biochem.
, vol.31
, pp. 145-153
-
-
Griffiths, B.S.1
Ritz, K.2
Ebblewhite, N.3
Dobson, G.4
-
16
-
-
0028965663
-
Analysis of factors affecting the accuracy, reproducibility, and interpretation of microbial community carbon source utilization patterns
-
Haack S.K., Garchow H., Klug M.J., and Forney L.J. Analysis of factors affecting the accuracy, reproducibility, and interpretation of microbial community carbon source utilization patterns. Appl. Environ. Microbiol. 61 (1995) 1458-1468
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 1458-1468
-
-
Haack, S.K.1
Garchow, H.2
Klug, M.J.3
Forney, L.J.4
-
17
-
-
0037208477
-
Applicability of tetrazolium salts for the measurement of respiratory activity and viability of groundwater bacteria
-
Hatzinger P.B., Palmer P., Smith R.L., Peñarrieta C.T., and Yoshinari T. Applicability of tetrazolium salts for the measurement of respiratory activity and viability of groundwater bacteria. J. Microbiol. Methods 52 (2003) 47-58
-
(2003)
J. Microbiol. Methods
, vol.52
, pp. 47-58
-
-
Hatzinger, P.B.1
Palmer, P.2
Smith, R.L.3
Peñarrieta, C.T.4
Yoshinari, T.5
-
18
-
-
0031082111
-
Separation power of the 95 substrates of the Biolog system determined in various soils
-
Hitzl W., Rangger A., Sharma S., and Insam H. Separation power of the 95 substrates of the Biolog system determined in various soils. FEMS Microbiol. Ecol. 22 (1997) 167-174
-
(1997)
FEMS Microbiol. Ecol.
, vol.22
, pp. 167-174
-
-
Hitzl, W.1
Rangger, A.2
Sharma, S.3
Insam, H.4
-
19
-
-
0002612012
-
Substrate utilization test in microbial ecology. A preface to the special issue
-
Insam H. Substrate utilization test in microbial ecology. A preface to the special issue. J. Microbiol. Methods 30 (1997) 1-2
-
(1997)
J. Microbiol. Methods
, vol.30
, pp. 1-2
-
-
Insam, H.1
-
20
-
-
33745792378
-
Use of Biolog for the community level physiological profiling (CLPP) of environmental samples
-
Akkermans A.D.L., van Elsas J.D., DeBrujin F.J., Head I.M., and Kowalchuck G.A. (Eds), Kluwer Academic Publishers
-
Insam H., and Goberna M. Use of Biolog for the community level physiological profiling (CLPP) of environmental samples. In: Akkermans A.D.L., van Elsas J.D., DeBrujin F.J., Head I.M., and Kowalchuck G.A. (Eds). Molecular Microbial Ecology Manual. Detection, Identification and Classification of Microbes Using Other Methods (2004), Kluwer Academic Publishers 853-860
-
(2004)
Molecular Microbial Ecology Manual. Detection, Identification and Classification of Microbes Using Other Methods
, pp. 853-860
-
-
Insam, H.1
Goberna, M.2
-
21
-
-
0003721384
-
-
Cambridge University Press, Cambridge
-
Killham K. Soil Ecology (1994), Cambridge University Press, Cambridge 242
-
(1994)
Soil Ecology
, pp. 242
-
-
Killham, K.1
-
22
-
-
3242731518
-
Methods of studying soil microbial diversity
-
Kirk J.L., Beaudette L.A., Hart M., Moutoglis P., Klironomos J.L., Lee H., and Trevors J.T. Methods of studying soil microbial diversity. J. Microbiol. Methods 58 (2004) 169-188
-
(2004)
J. Microbiol. Methods
, vol.58
, pp. 169-188
-
-
Kirk, J.L.1
Beaudette, L.A.2
Hart, M.3
Moutoglis, P.4
Klironomos, J.L.5
Lee, H.6
Trevors, J.T.7
-
23
-
-
0031920135
-
The use of carbon substrate utilization patterns in environmental and ecological microbiology
-
Konopka A., Oliver L., and Turco R. The use of carbon substrate utilization patterns in environmental and ecological microbiology. Microb. Ecol. 35 (1998) 103-115
-
(1998)
Microb. Ecol.
, vol.35
, pp. 103-115
-
-
Konopka, A.1
Oliver, L.2
Turco, R.3
-
24
-
-
27144558632
-
Methods of microbial community profiling and their application to forest soils
-
Leckie S.E. Methods of microbial community profiling and their application to forest soils. For. Ecol. Manag. 220 (2005) 88-106
-
(2005)
For. Ecol. Manag.
, vol.220
, pp. 88-106
-
-
Leckie, S.E.1
-
25
-
-
32544437245
-
Application of 16S rDNA-PCR amplification and DGGE fingerprinting for detection of shift in microbial community diversity in Cu-, Zn-, and Cd-contaminated paddy soils
-
Li Z.J., Xu J.M., Tang C.X., Wu J.J., Muhammad A., and Wang H.Z. Application of 16S rDNA-PCR amplification and DGGE fingerprinting for detection of shift in microbial community diversity in Cu-, Zn-, and Cd-contaminated paddy soils. Chemosphere 62 (2006) 1374-1380
-
(2006)
Chemosphere
, vol.62
, pp. 1374-1380
-
-
Li, Z.J.1
Xu, J.M.2
Tang, C.X.3
Wu, J.J.4
Muhammad, A.5
Wang, H.Z.6
-
26
-
-
0033126706
-
Elevated CO2 alters microbial communities in alpine grassland
-
Mayr C., Miller M., and Insam H. Elevated CO2 alters microbial communities in alpine grassland. J. Microbiol. Methods 36 (1999) 35-43
-
(1999)
J. Microbiol. Methods
, vol.36
, pp. 35-43
-
-
Mayr, C.1
Miller, M.2
Insam, H.3
-
27
-
-
0033135813
-
Community level physiological profiles of soil bacteria unaffected by extraction method
-
Mayr C., Winding A., and Hendriksen N.B. Community level physiological profiles of soil bacteria unaffected by extraction method. J. Microbiol. Methods 36 (1999) 29-33
-
(1999)
J. Microbiol. Methods
, vol.36
, pp. 29-33
-
-
Mayr, C.1
Winding, A.2
Hendriksen, N.B.3
-
28
-
-
0008105172
-
Determination of the genetic diversity of microbial community using DGGE analysis of PCR amplified 16S rRNA
-
Muyzer G., and de Waal E.C. Determination of the genetic diversity of microbial community using DGGE analysis of PCR amplified 16S rRNA. NATO ASi Ser. G35 (1994) 207-214
-
(1994)
NATO ASi Ser.
, vol.G35
, pp. 207-214
-
-
Muyzer, G.1
de Waal, E.C.2
-
29
-
-
0027460328
-
Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
-
Muyzer G., de Waal E.C., and Uitterlinden A.G. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59 (1993) 695-700
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 695-700
-
-
Muyzer, G.1
de Waal, E.C.2
Uitterlinden, A.G.3
-
30
-
-
0034791848
-
The role played by microorganisms in the biogenesis of soil cracks: importance of substrate quantity and quality
-
Preston S., Wirth S., Ritz K., Griffiths B.S., and Young L.M. The role played by microorganisms in the biogenesis of soil cracks: importance of substrate quantity and quality. Soil Biol. Biochem. 33 (2001) 1851-1858
-
(2001)
Soil Biol. Biochem.
, vol.33
, pp. 1851-1858
-
-
Preston, S.1
Wirth, S.2
Ritz, K.3
Griffiths, B.S.4
Young, L.M.5
-
31
-
-
0036804360
-
Analysis of microbial community functional diversity using sole-carbon-source utilization profiles - a critique
-
Preston-Mafham J., Boddy L., and Randerson P.F. Analysis of microbial community functional diversity using sole-carbon-source utilization profiles - a critique. FEMS Microbiol. Ecol. 42 (2002) 1-14
-
(2002)
FEMS Microbiol. Ecol.
, vol.42
, pp. 1-14
-
-
Preston-Mafham, J.1
Boddy, L.2
Randerson, P.F.3
-
32
-
-
0020144729
-
Nycodenz: a new non-ionic iodinated gradient medium
-
Rickwood D., Ford T., and Graham J. Nycodenz: a new non-ionic iodinated gradient medium. Anal. Biochem. 123 (1982) 23
-
(1982)
Anal. Biochem.
, vol.123
, pp. 23
-
-
Rickwood, D.1
Ford, T.2
Graham, J.3
-
33
-
-
0012354298
-
Characterization of microbial communities during composting of organic wastes
-
Insam H., Riddech N., and Klammer S. (Eds), Springer Verlag, Heidelberg
-
Riddech M., Klammer S., and Insam H. Characterization of microbial communities during composting of organic wastes. In: Insam H., Riddech N., and Klammer S. (Eds). Microbiology of Composting (2002), Springer Verlag, Heidelberg 43-52
-
(2002)
Microbiology of Composting
, pp. 43-52
-
-
Riddech, M.1
Klammer, S.2
Insam, H.3
-
34
-
-
33748422932
-
Molecular and physiological bacterial diversity of a semi-arid soil contaminated with different levels of formulated atrazine
-
Ros M., Goberna M., Moreno J.L., Hernandez T., Garcia C., Insam H., and Pascual J.A. Molecular and physiological bacterial diversity of a semi-arid soil contaminated with different levels of formulated atrazine. Appl. Soil Ecol. 34 (2006) 93-102
-
(2006)
Appl. Soil Ecol.
, vol.34
, pp. 93-102
-
-
Ros, M.1
Goberna, M.2
Moreno, J.L.3
Hernandez, T.4
Garcia, C.5
Insam, H.6
Pascual, J.A.7
-
35
-
-
33646588310
-
Long-term effects of compost amendment of soil on functional and structural diversity and microbial activity
-
Ros M., Klammer S., Knapp B., Aichnerger K., and Insam H. Long-term effects of compost amendment of soil on functional and structural diversity and microbial activity. Soil Use Manage. 22 (2006) 209-218
-
(2006)
Soil Use Manage.
, vol.22
, pp. 209-218
-
-
Ros, M.1
Klammer, S.2
Knapp, B.3
Aichnerger, K.4
Insam, H.5
-
36
-
-
0031764376
-
A new approach to utilize PCR single-strand conformation polymorphism for 16S rRNA gene-based microbial community analysis
-
Schwieger F., and Tebbe C.C. A new approach to utilize PCR single-strand conformation polymorphism for 16S rRNA gene-based microbial community analysis. Appl. Environ. Microbiol. 64 (1998) 4870-4876
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4870-4876
-
-
Schwieger, F.1
Tebbe, C.C.2
-
37
-
-
0032056324
-
Functional diversity of soil bacterial communities increases after maize litter amendment
-
Sharma S., Rangger A., von Lützow M., and Insam H. Functional diversity of soil bacterial communities increases after maize litter amendment. Eur. J. Soil Biol. 34 (1998) 53-60
-
(1998)
Eur. J. Soil Biol.
, vol.34
, pp. 53-60
-
-
Sharma, S.1
Rangger, A.2
von Lützow, M.3
Insam, H.4
-
38
-
-
0031977257
-
Analysis of Biolog GN substrate utilization patterns by microbial communities
-
Smalla K., Wachtendorf U., Heuer H., Liu W.T., and Forney L. Analysis of Biolog GN substrate utilization patterns by microbial communities. Appl. Environ. Microbiol. 64 (1998) 1220-1225
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 1220-1225
-
-
Smalla, K.1
Wachtendorf, U.2
Heuer, H.3
Liu, W.T.4
Forney, L.5
-
39
-
-
39749198350
-
-
Soil Survey Staff (1998) Keys to Soil Taxonomy. NRCS, USDA. Washington DC, 326 pp.
-
Soil Survey Staff (1998) Keys to Soil Taxonomy. NRCS, USDA. Washington DC, 326 pp.
-
-
-
-
41
-
-
0023509576
-
c values and tests of hypothesis to explain the failure of the chloroform fumigation-incubation method in acid soils
-
c values and tests of hypothesis to explain the failure of the chloroform fumigation-incubation method in acid soils. Soil Biol. Biochem. 19 (1987) 381-387
-
(1987)
Soil Biol. Biochem.
, vol.19
, pp. 381-387
-
-
Vance, E.D.1
Brookes, P.C.2
Jenkinson, D.3
-
42
-
-
84871555569
-
An examination of the Degtjareff method for determining organic carbon in soils: effect of variations in digestion conditions and of inorganic soil constitutions
-
Walkley A., and Black I.A. An examination of the Degtjareff method for determining organic carbon in soils: effect of variations in digestion conditions and of inorganic soil constitutions. Soil. Sci. 63 (1934) 251-263
-
(1934)
Soil. Sci.
, vol.63
, pp. 251-263
-
-
Walkley, A.1
Black, I.A.2
-
43
-
-
0026616083
-
A comparative assessment of factors which influence microbial biomass carbon and nitrogen levels in soil
-
Wardle D.A. A comparative assessment of factors which influence microbial biomass carbon and nitrogen levels in soil. Biol. Rev. 67 (1992) 321-358
-
(1992)
Biol. Rev.
, vol.67
, pp. 321-358
-
-
Wardle, D.A.1
-
44
-
-
0001911965
-
Biolog substrate utilization assay for metabolic fingerprints of soil bacteria: incubation effects
-
Insam H., and Rangger A. (Eds), Springer, Heildelberg
-
Winding A., and Hendriksen N.B. Biolog substrate utilization assay for metabolic fingerprints of soil bacteria: incubation effects. In: Insam H., and Rangger A. (Eds). Microbial Communities: Functional versus Structural Approaches (1997), Springer, Heildelberg 195-205
-
(1997)
Microbial Communities: Functional versus Structural Approaches
, pp. 195-205
-
-
Winding, A.1
Hendriksen, N.B.2
-
45
-
-
0034097867
-
Functional substrate biodiversity of cultivated and uncultivated A horizons of vertisols in NW New South Wales
-
Yan F., McBratney A.B., and Copeland L. Functional substrate biodiversity of cultivated and uncultivated A horizons of vertisols in NW New South Wales. Geoderma 96 (2000) 321-343
-
(2000)
Geoderma
, vol.96
, pp. 321-343
-
-
Yan, F.1
McBratney, A.B.2
Copeland, L.3
-
46
-
-
39749125045
-
Microbial biomass and community structure in a sequence of soils with increasing fertility and changing land use
-
Yao H., He Z., Wilson M.J., and Campbell C.D. Microbial biomass and community structure in a sequence of soils with increasing fertility and changing land use. Microb. Ecol. 23 (2000) 41-54
-
(2000)
Microb. Ecol.
, vol.23
, pp. 41-54
-
-
Yao, H.1
He, Z.2
Wilson, M.J.3
Campbell, C.D.4
-
47
-
-
0028160654
-
Functional diversity of microbial communities: a quantitative approach
-
Zak J.C., Willing M.R., Moorhead D.L., and Widman H.G. Functional diversity of microbial communities: a quantitative approach. Soil Biol. Biochem. 26 (1994) 1101-1108
-
(1994)
Soil Biol. Biochem.
, vol.26
, pp. 1101-1108
-
-
Zak, J.C.1
Willing, M.R.2
Moorhead, D.L.3
Widman, H.G.4
|