-
1
-
-
9744231340
-
Dissection of phylogenetic relationships among 19 rapidly growing Mycobacterium species by 16S rRNA, hsp65, sodA and rpoB gene sequencing
-
Adékambi T. & Drancourt, M. (2004). Dissection of phylogenetic relationships among 19 rapidly growing Mycobacterium species by 16S rRNA, hsp65, sodA and rpoB gene sequencing. Int J Syst Evol Microbiol 54, 2095-2105.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 2095-2105
-
-
Adékambi, T.1
Drancourt, M.2
-
2
-
-
0346218268
-
rpoB-based identificatian of nonpigmented and late-pigmented rapidly growing mycobacteria
-
Adékambi, T., Colson, P. & Drancourt, M. (2004). rpoB-based identificatian of nonpigmented and late-pigmented rapidly growing mycobacteria. J Clin Microbiol 41, 5699-5708.
-
(2004)
J Clin Microbiol
, vol.41
, pp. 5699-5708
-
-
Adékambi, T.1
Colson, P.2
Drancourt, M.3
-
3
-
-
33645913542
-
Description of Mycobacterium conceptionense sp. nov., a Mycobacterium fortuitum group organism isolated from a posttraumatic osteitis inflammation
-
Adékambi, T., Stein, A., Carvajal, J, Raoult, D. & Drancourt, M. (2006). Description of Mycobacterium conceptionense sp. nov., a Mycobacterium fortuitum group organism isolated from a posttraumatic osteitis inflammation. J Clin Microbiol 44, 1268-1273.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 1268-1273
-
-
Adékambi, T.1
Stein, A.2
Carvajal, J.3
Raoult, D.4
Drancourt, M.5
-
4
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z, Miller, W. & Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
5
-
-
0032754133
-
-
Brown, B. A., Springer, B., Staingrube V. A. & other authors (1999). Mycobacterium wolinskyi sp. nov. and Mycobacterium goodii sp. nov., two new rapidly growing species related to Mycobacterium smegmatis and associated with human wound infection: a cooperative study from the International Working Group on mycobacterial taxonomy. Int J Syst Evol Microbiol 49, 1493-1511.
-
Brown, B. A., Springer, B., Staingrube V. A. & other authors (1999). Mycobacterium wolinskyi sp. nov. and Mycobacterium goodii sp. nov., two new rapidly growing species related to Mycobacterium smegmatis and associated with human wound infection: a cooperative study from the International Working Group on mycobacterial taxonomy. Int J Syst Evol Microbiol 49, 1493-1511.
-
-
-
-
6
-
-
0036781756
-
Clinical and taxonomic status of pathogenic, nonpigmented or late-pigmented rapidly growing mycobacteria
-
Brown-Elliott, & Wallace, R. J., Jr (2002). Clinical and taxonomic status of pathogenic, nonpigmented or late-pigmented rapidly growing mycobacteria. Clin Microbiol Rev 15, 716-746.
-
(2002)
Clin Microbiol Rev
, vol.15
, pp. 716-746
-
-
Elliott, B.1
Wallace Jr, R.J.2
-
7
-
-
27444443449
-
Infections caused by nontuberculous Mycobacteria
-
6th edn, pp, Edited by G. L. Mandell, J. E. Bennett & R. Dolin. Philadelphia: Elsevier
-
Brown-Elliott, B.A. & Wallace, R. J., Jr (2005). Infections caused by nontuberculous Mycobacteria. In Principles and Practice of Infectious Diseases, 6th edn, pp. 2909-2916. Edited by G. L. Mandell, J. E. Bennett & R. Dolin. Philadelphia: Elsevier.
-
(2005)
Principles and Practice of Infectious Diseases
, pp. 2909-2916
-
-
Brown-Elliott, B.A.1
Wallace Jr, R.J.2
-
8
-
-
0034768463
-
Mycolic acid analysis by high performance liquid chromatography for identification of Mycobacterium species
-
Butler, W. R. & Guthertz, L. S. (2001). Mycolic acid analysis by high performance liquid chromatography for identification of Mycobacterium species. Clin Microbiol Rev 14, 704-726.
-
(2001)
Clin Microbiol Rev
, vol.14
, pp. 704-726
-
-
Butler, W.R.1
Guthertz, L.S.2
-
9
-
-
0025171366
-
High performance liquid chromatography patterns of mycolic acids as criteria for identification of Mycobacterium chelonae, Mycobacterium fortuitum and Mycobacteríum smegmatis
-
Butler, W. R. & Kilburn, J. O. (1990). High performance liquid chromatography patterns of mycolic acids as criteria for identification of Mycobacterium chelonae, Mycobacterium fortuitum and Mycobacteríum smegmatis. J Clin Microbiol 28, 2094-2098.
-
(1990)
J Clin Microbiol
, vol.28
, pp. 2094-2098
-
-
Butler, W.R.1
Kilburn, J.O.2
-
10
-
-
0026700574
-
Identification of Mycobacterium avium complex strains and some similar species by high performance liquid chromatography
-
Butler, W. R., Thibert, L. & Kilburn, J. O. (1992). Identification of Mycobacterium avium complex strains and some similar species by high performance liquid chromatography. J Clin Microbiol 30, 2698-2704.
-
(1992)
J Clin Microbiol
, vol.30
, pp. 2698-2704
-
-
Butler, W.R.1
Thibert, L.2
Kilburn, J.O.3
-
11
-
-
12444299961
-
BIBI, a bioinformatics bacterial identification tool
-
Devulder, G., Perrière, G, Baty, F. & Flandrois, J. P. (2003). BIBI, a bioinformatics bacterial identification tool. J Clin Microbiol 41, 1785-1787.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 1785-1787
-
-
Devulder, G.1
Perrière, G.2
Baty, F.3
Flandrois, J.P.4
-
12
-
-
13244273719
-
A multigene approach to phylogenetic analysis using the genus Mycobacterium as a model
-
Devulder, G., Pérouse de Montclos, M. & Flandrois, J. P. (2005). A multigene approach to phylogenetic analysis using the genus Mycobacterium as a model. Int J Syst Evol Microbiol 55, 293-302.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 293-302
-
-
Devulder, G.1
Pérouse de Montclos, M.2
Flandrois, J.P.3
-
13
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
-
(1981)
J Mol Evol
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
14
-
-
0030464460
-
SEAVIEW and PHYLO_WIN, two graphic tools for sequence alignment and molecular phylogeny
-
Galtier, N., Gouy, M. & Gautier, C. (1996). SEAVIEW and PHYLO_WIN, two graphic tools for sequence alignment and molecular phylogeny. Comput Appl Biosci 12, 543-548.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 543-548
-
-
Galtier, N.1
Gouy, M.2
Gautier, C.3
-
15
-
-
84963036271
-
Quantitative phyletics and the evolution of anurans
-
Kluge, A. G. & Farris, F. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
-
(1969)
Syst Zool
, vol.18
, pp. 1-32
-
-
Kluge, A.G.1
Farris, F.S.2
-
16
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinforme 5, 150-163.
-
(2004)
Brief Bioinforme
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
17
-
-
33845927692
-
Performance standards for antimicrobial susceptibility testing
-
NCCLS , Wayne, PA: NCCLS
-
NCCLS (2002). Performance standards for antimicrobial susceptibility testing. Twelfth informational supplement. M100-S12. Wayne, PA: NCCLS.
-
(2002)
Twelfth informational
, Issue.SUPPL.EMENT. M100-S12
-
-
-
18
-
-
34248660428
-
Susceptibility testing of Mycobacteria, Nocardia, and other aerobic actinonaycetes
-
NCCLS , Wayne, PA: NCCLS
-
NCCLS (2003). Susceptibility testing of Mycobacteria, Nocardia, and other aerobic actinonaycetes. Approved standard M24-A. Wayne, PA: NCCLS.
-
(2003)
Approved standard M24-A
-
-
-
19
-
-
0033035987
-
hsp65 sequencing for identification of rapidly growing mycobacteria
-
Ringuel, H., Akoua-Koffl, C., Honore, S., Varnerot, A., Vincent, V., Berche, P., Gaillard, J. L. & Pierre-Audigier, C. (1999). hsp65 sequencing for identification of rapidly growing mycobacteria. J Clin Microbiol 37, 852-857.
-
(1999)
J Clin Microbiol
, vol.37
, pp. 852-857
-
-
Ringuel, H.1
Akoua-Koffl, C.2
Honore, S.3
Varnerot, A.4
Vincent, V.5
Berche, P.6
Gaillard, J.L.7
Pierre-Audigier, C.8
-
20
-
-
5444221170
-
Nocardia mexicana sp. nov., a new pathogen isolated from human mycetomas
-
Rodríguez-Nava, V., Couble, A., Molinard, C., Sandoval, H, Bairon, P. & Laurent, F,(2004). Nocardia mexicana sp. nov., a new pathogen isolated from human mycetomas. J Clin Microbiol 42, 4530-4535.
-
(2004)
J Clin Microbiol
, vol.42
, pp. 4530-4535
-
-
Rodríguez-Nava, V.1
Couble, A.2
Molinard, C.3
Sandoval, H.4
Bairon, P.5
Laurent, F.6
-
21
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N. & Nei. M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
22
-
-
0034026746
-
Mycobacterium septicum sp. nov., a new rapidly growing species associated with catheter-related bacteraemia
-
Schinsky, M. F., McNeil, M. M., Whitney, A. M., Steigerwalt, A. G., Lasker, B. A., Floyd, M. M., Hogg. G. G., Brenner, D. J. & Brown, J. M. (2000). Mycobacterium septicum sp. nov., a new rapidly growing species associated with catheter-related bacteraemia. Int J Syst Evol Microbiol 50, 575-581.
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 575-581
-
-
Schinsky, M.F.1
McNeil, M.M.2
Whitney, A.M.3
Steigerwalt, A.G.4
Lasker, B.A.5
Floyd, M.M.6
Hogg, G.G.7
Brenner, D.J.8
Brown, J.M.9
-
23
-
-
5444241951
-
-
Schinsky, M. F., Morey, R. E., Steigerwalt, A. G. & other authors (2004). Taxonomic variation in the Mycobacterium fortuitum third biovariant complex: description of Mycobacterium boenickei sp. nov., Mycobacterium houstononse sp. nov., Mycobacterium neworleansense sp. nov. and Mycobacterium brisbanense sp.nov. and recognition of Mycobacterium porcinum from human clinical isolates. Int J Sys Evol Microbiol 54, 1653-1667.
-
Schinsky, M. F., Morey, R. E., Steigerwalt, A. G. & other authors (2004). Taxonomic variation in the Mycobacterium fortuitum third biovariant complex: description of Mycobacterium boenickei sp. nov., Mycobacterium houstononse sp. nov., Mycobacterium neworleansense sp. nov. and Mycobacterium brisbanense sp.nov. and recognition of Mycobacterium porcinum from human clinical isolates. Int J Sys Evol Microbiol 54, 1653-1667.
-
-
-
-
24
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., Gibson, T. J., Plewniak F, Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
25
-
-
39749121579
-
-
Vincent V., Brown-Elliott, B. A., Jost, K C., Jr & Wallace, R. J., Jr (2003). Mycobacterium phenotypic and genotypic identification. In Manual of Clinical Microbiology, 8th edn; pp. 560-584. Edited by P. M. Murray, E. J. Baron, J. H.. Jorgensen, M. A. Pfaller & R. H. Yolken. Washington, DC: American Society for Microbiology.
-
Vincent V., Brown-Elliott, B. A., Jost, K C., Jr & Wallace, R. J., Jr (2003). Mycobacterium phenotypic and genotypic identification. In Manual of Clinical Microbiology, 8th edn; pp. 560-584. Edited by P. M. Murray, E. J. Baron, J. H.. Jorgensen, M. A. Pfaller & R. H. Yolken. Washington, DC: American Society for Microbiology.
-
-
-
-
26
-
-
0025981720
-
-
Wallace, R. J., Jr, Brown, B. A., Silcox, V. A., Tsultamura, Nash, D. R., Steele, L. C., Steingrube., V. A., Smith, J., Sumter, G. & other authors (1991). Clinical disease, drug susceptibility, and biochemical patterns of the unnamed third biovariant complex of Mycobacterium fortuitum. J Infect Dis 163, 598-603.
-
Wallace, R. J., Jr, Brown, B. A., Silcox, V. A., Tsultamura, Nash, D. R., Steele, L. C., Steingrube., V. A., Smith, J., Sumter, G. & other authors (1991). Clinical disease, drug susceptibility, and biochemical patterns of the unnamed third biovariant complex of Mycobacterium fortuitum. J Infect Dis 163, 598-603.
-
-
-
-
27
-
-
0036701941
-
-
Wallace, R. J. Jr. Brown-Elliott B. A., Hall, I., Roberts, G., Wilson, R. W., MannL B, Crist, C. J., Chiu, S. H., Dunlap, R & other authors (2002). Clinical and laboratory features of Mycobacterium mageritense. J Clin Microbiol 40, 2930-2935.
-
Wallace, R. J. Jr. Brown-Elliott B. A., Hall, I., Roberts, G., Wilson, R. W., MannL B, Crist, C. J., Chiu, S. H., Dunlap, R & other authors (2002). Clinical and laboratory features of Mycobacterium mageritense. J Clin Microbiol 40, 2930-2935.
-
-
-
-
28
-
-
0028130261
-
The superoxide dismutase gene, a target for detection and identification of mycobacteria by PCR
-
Zolg, J. W. & Philippi-Schulz, S. (1994). The superoxide dismutase gene, a target for detection and identification of mycobacteria by PCR. J Clin Microbiol 32, 2801-2812.
-
(1994)
J Clin Microbiol
, vol.32
, pp. 2801-2812
-
-
Zolg, J.W.1
Philippi-Schulz, S.2
|