-
1
-
-
0033954256
-
The Protein Data Bank
-
Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H., et al. The Protein Data Bank. Nucleic Acids Res. 28 (2000) 235-242
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
-
2
-
-
3042621274
-
The progress of membrane protein structure determination
-
White S.H. The progress of membrane protein structure determination. Protein Sci. 13 (2004) 1948-1949
-
(2004)
Protein Sci.
, vol.13
, pp. 1948-1949
-
-
White, S.H.1
-
3
-
-
0033950315
-
Understanding membrane protein structure by design
-
Bowie J.U. Understanding membrane protein structure by design. Nat. Struct. Biol. 7 (2000) 91-94
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 91-94
-
-
Bowie, J.U.1
-
4
-
-
28444488355
-
Solving the membrane protein folding problem
-
Bowie J.U. Solving the membrane protein folding problem. Nature 438 (2005) 581-589
-
(2005)
Nature
, vol.438
, pp. 581-589
-
-
Bowie, J.U.1
-
5
-
-
34249683488
-
Membrane protein structure: prediction vs reality
-
Elofsson A., and von Heijne G. Membrane protein structure: prediction vs reality. Annu. Rev. Biochem. 76 (2007) 125-140
-
(2007)
Annu. Rev. Biochem.
, vol.76
, pp. 125-140
-
-
Elofsson, A.1
von Heijne, G.2
-
6
-
-
24644490119
-
Comparative analysis of amino acid distributions in integral membrane proteins from 107 genomes
-
Nilsson J., Persson B., and von Heijne G. Comparative analysis of amino acid distributions in integral membrane proteins from 107 genomes. Proteins 60 (2005) 606-616
-
(2005)
Proteins
, vol.60
, pp. 606-616
-
-
Nilsson, J.1
Persson, B.2
von Heijne, G.3
-
7
-
-
0033790343
-
Helical membrane protein folding, stability, and evolution
-
Popot J.L., and Engelman D.M. Helical membrane protein folding, stability, and evolution. Annu. Rev. Biochem. 69 (2000) 881-922
-
(2000)
Annu. Rev. Biochem.
, vol.69
, pp. 881-922
-
-
Popot, J.L.1
Engelman, D.M.2
-
8
-
-
0035807810
-
Specificity in transmembrane helix-helix interactions can define a hierarchy of stability for sequence variants
-
Fleming K.G., and Engelman D.M. Specificity in transmembrane helix-helix interactions can define a hierarchy of stability for sequence variants. Proc. Natl Acad. Sci. USA 98 (2001) 14340-14344
-
(2001)
Proc. Natl Acad. Sci. USA
, vol.98
, pp. 14340-14344
-
-
Fleming, K.G.1
Engelman, D.M.2
-
9
-
-
1942469334
-
The affinity of GXXXG motifs in transmembrane helix-helix interactions is modulated by long-range communication
-
Melnyk R.A., Kim S., Curran A.R., Engelman D.M., Bowie J.U., and Deber C.M. The affinity of GXXXG motifs in transmembrane helix-helix interactions is modulated by long-range communication. J. Biol. Chem. 279 (2004) 16591-16597
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16591-16597
-
-
Melnyk, R.A.1
Kim, S.2
Curran, A.R.3
Engelman, D.M.4
Bowie, J.U.5
Deber, C.M.6
-
10
-
-
16344378642
-
Analysis of side-chain rotamers in transmembrane proteins
-
Chamberlain A.K., and Bowie J.U. Analysis of side-chain rotamers in transmembrane proteins. Biophys. J. 87 (2004) 3460-3469
-
(2004)
Biophys. J.
, vol.87
, pp. 3460-3469
-
-
Chamberlain, A.K.1
Bowie, J.U.2
-
11
-
-
0042931286
-
Sequence motifs, polar interactions and conformational changes in helical membrane proteins
-
Curran A.R., and Engelman D.M. Sequence motifs, polar interactions and conformational changes in helical membrane proteins. Curr. Opin. Struct. Biol. 13 (2003) 412-417
-
(2003)
Curr. Opin. Struct. Biol.
, vol.13
, pp. 412-417
-
-
Curran, A.R.1
Engelman, D.M.2
-
12
-
-
33746358793
-
Introduction to the membrane protein reviews: the interplay of structure, dynamics, and environment in membrane protein function
-
Sachs J.N., and Engelman D.M. Introduction to the membrane protein reviews: the interplay of structure, dynamics, and environment in membrane protein function. Annu. Rev. Biochem. 75 (2006) 707-712
-
(2006)
Annu. Rev. Biochem.
, vol.75
, pp. 707-712
-
-
Sachs, J.N.1
Engelman, D.M.2
-
13
-
-
33748791763
-
Helix-packing motifs in membrane proteins
-
Walters R.F., and DeGrado W.F. Helix-packing motifs in membrane proteins. Proc. Natl Acad. Sci. USA 103 (2006) 13658-13663
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 13658-13663
-
-
Walters, R.F.1
DeGrado, W.F.2
-
14
-
-
17844379225
-
Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins
-
Adamian L., Nanda V., DeGrado W.F., and Liang J. Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins. Proteins 59 (2005) 496-509
-
(2005)
Proteins
, vol.59
, pp. 496-509
-
-
Adamian, L.1
Nanda, V.2
DeGrado, W.F.3
Liang, J.4
-
15
-
-
16344390562
-
Properties of integral membrane protein structures: derivation of an implicit membrane potential
-
Ulmschneider M.B., Sansom M.S., and Di Nola A. Properties of integral membrane protein structures: derivation of an implicit membrane potential. Proteins 59 (2005) 252-265
-
(2005)
Proteins
, vol.59
, pp. 252-265
-
-
Ulmschneider, M.B.1
Sansom, M.S.2
Di Nola, A.3
-
16
-
-
0035795721
-
Amino acid distributions in integral membrane protein structures
-
Ulmschneider M.B., and Sansom M.S. Amino acid distributions in integral membrane protein structures. Biochim. Biophys. Acta 1512 (2001) 1-14
-
(2001)
Biochim. Biophys. Acta
, vol.1512
, pp. 1-14
-
-
Ulmschneider, M.B.1
Sansom, M.S.2
-
17
-
-
0026609104
-
The distribution of charged amino acids in mitochondrial inner-membrane proteins suggests different modes of membrane integration for nuclearly and mitochondrially encoded proteins
-
Gavel Y., and von Heijne G. The distribution of charged amino acids in mitochondrial inner-membrane proteins suggests different modes of membrane integration for nuclearly and mitochondrially encoded proteins. Eur. J. Biochem. 205 (1992) 1207-1215
-
(1992)
Eur. J. Biochem.
, vol.205
, pp. 1207-1215
-
-
Gavel, Y.1
von Heijne, G.2
-
18
-
-
0025896455
-
The 'positive-inside rule' applies to thylakoid membrane proteins
-
Gavel Y., Steppuhn J., Herrmann R., and von Heijne G. The 'positive-inside rule' applies to thylakoid membrane proteins. FEBS Lett. 282 (1991) 41-46
-
(1991)
FEBS Lett.
, vol.282
, pp. 41-46
-
-
Gavel, Y.1
Steppuhn, J.2
Herrmann, R.3
von Heijne, G.4
-
19
-
-
0026716643
-
Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule
-
von Heijne G. Membrane protein structure prediction. Hydrophobicity analysis and the positive-inside rule. J. Mol. Biol. 225 (1992) 487-494
-
(1992)
J. Mol. Biol.
, vol.225
, pp. 487-494
-
-
von Heijne, G.1
-
22
-
-
0029919190
-
Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading
-
Miyazawa S., and Jernigan R.L. Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading. J. Mol. Biol. 256 (1996) 623-644
-
(1996)
J. Mol. Biol.
, vol.256
, pp. 623-644
-
-
Miyazawa, S.1
Jernigan, R.L.2
-
23
-
-
0020997912
-
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch W., and Sander C. Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22 (1983) 2577-2637
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
24
-
-
0028211273
-
A model recognition approach to the prediction of all-helical membrane protein structure and topology
-
Jones D.T., Taylor W.R., and Thornton J.M. A model recognition approach to the prediction of all-helical membrane protein structure and topology. Biochemistry 33 (1994) 3038-3049
-
(1994)
Biochemistry
, vol.33
, pp. 3038-3049
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
25
-
-
0031826040
-
SOSUI: classification and secondary structure prediction system for membrane proteins
-
Hirokawa T., Boon-Chieng S., and Mitaku S. SOSUI: classification and secondary structure prediction system for membrane proteins. Bioinformatics 14 (1998) 378-379
-
(1998)
Bioinformatics
, vol.14
, pp. 378-379
-
-
Hirokawa, T.1
Boon-Chieng, S.2
Mitaku, S.3
-
26
-
-
0026244229
-
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
-
Kraulis P.J. MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallogr. 24 (1991) 946-950
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
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