-
1
-
-
0034628508
-
A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
-
10.1038/35001009 10688190
-
Uetz P Giot L Cagney G Mansfield TA Judson RS Knight JR Lockshon D Narayan V Srinivasan M Pochart P Qureshi-Emili A Li Y Godwin B Conover D Kalbfleisch T Vijayadamodar G Yang M Johnston M Fields S Rothberg JM A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae Nature 2000, 403(6770):623-627. 10.1038/35001009 10688190
-
(2000)
Nature
, vol.403
, Issue.6770
, pp. 623-627
-
-
Uetz, P.1
Giot, L.2
Cagney, G.3
Mansfield, T.A.4
Judson, R.S.5
Knight, J.R.6
Lockshon, D.7
Narayan, V.8
Srinivasan, M.9
Pochart, P.10
Qureshi-Emili, A.11
Li, Y.12
Godwin, B.13
Conover, D.14
Kalbfleisch, T.15
Vijayadamodar, G.16
Yang, M.17
Johnston, M.18
Fields, S.19
Rothberg, J.M.20
more..
-
2
-
-
0033974688
-
Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins
-
15550 10655498 10.1073/pnas.97.3.1143
-
Ito T Tashiro K Muta S Ozawa R Chiba T Nishizawa M Yamamoto K Kuhara S Sakaki Y Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins Proc Natl Acad Sci USA 2000, 97(3):1143-1147. 15550 10655498 10.1073/pnas.97.3.1143
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, Issue.3
, pp. 1143-1147
-
-
Ito, T.1
Tashiro, K.2
Muta, S.3
Ozawa, R.4
Chiba, T.5
Nishizawa, M.6
Yamamoto, K.7
Kuhara, S.8
Sakaki, Y.9
-
3
-
-
0035836765
-
A comprehensive two-hybrid analysis to explore the yeast protein interactome
-
31875 11283351 10.1073/pnas.061034498
-
Ito T Chiba T Ozawa R Yoshida M Hattori M Sakaki Y A comprehensive two-hybrid analysis to explore the yeast protein interactome Proc Natl Acad Sci USA 2001, 98(8):4569-4574. 31875 11283351 10.1073/pnas.061034498
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, Issue.8
, pp. 4569-4574
-
-
Ito, T.1
Chiba, T.2
Ozawa, R.3
Yoshida, M.4
Hattori, M.5
Sakaki, Y.6
-
4
-
-
33745160404
-
Large-scale identification of protein-protein interaction of Escherichia coli K-12
-
1457052 16606699 10.1101/gr.4527806
-
Arifuzzaman M Maeda M Itoh A Nishikata K Takita C Saito R Ara T Nakahigashi K Huang HC Hirai A Tsuzuki K Nakamura S Altaf-Ul-Amin M Oshima T Baba T Yamamoto N Kawamura T Ioka-Nakamichi T Kitagawa M Tomita M Kanaya S Wada C Mori H Large-scale identification of protein-protein interaction of Escherichia coli K-12 Genome Res 2006, 16(5):686-691. 1457052 16606699 10.1101/gr.4527806
-
(2006)
Genome Res
, vol.16
, Issue.5
, pp. 686-691
-
-
Arifuzzaman, M.1
Maeda, M.2
Itoh, A.3
Nishikata, K.4
Takita, C.5
Saito, R.6
Ara, T.7
Nakahigashi, K.8
Huang, H.C.9
Hirai, A.10
Tsuzuki, K.11
Nakamura, S.12
Altaf-Ul-Amin, M.13
Oshima, T.14
Baba, T.15
Yamamoto, N.16
Kawamura, T.17
Ioka-Nakamichi, T.18
Kitagawa, M.19
Tomita, M.20
Kanaya, S.21
Wada, C.22
Mori, H.23
more..
-
5
-
-
0035202321
-
Concepts actuels sur la pathogénie chez les bactéries
-
11570279 phytopathogènes
-
Boucher C Genin S Arlat M Concepts actuels sur la pathogénie chez les bactéries phytopathogènes C R Acad Sci III 2001, 324(10):915-922. 11570279 phytopathogènes
-
(2001)
C R Acad Sci III
, vol.324
, Issue.10
, pp. 915-922
-
-
Boucher, C.1
Genin, S.2
Arlat, M.3
-
6
-
-
0001119910
-
Current status of the gene-for-gene concept
-
10.1146/annurev.py.09.090171.001423
-
Flor HH Current status of the gene-for-gene concept Annu Rev Phytopathol 1971, 9:275-296. 10.1146/annurev.py.09.090171.001423
-
(1971)
Annu Rev Phytopathol
, vol.9
, pp. 275-296
-
-
Flor, H.H.1
-
7
-
-
0033637353
-
HrpB2 and HrpF from Xanthomonas are type III-secreted proteins and essential for pathogenicity and recognition by the host plant
-
10.1046/j.1365-2958.2000.02173.x 11115117
-
Rossier O Van den Ackerveken G Bonas U HrpB2 and HrpF from Xanthomonas are type III-secreted proteins and essential for pathogenicity and recognition by the host plant Mol Microbiol 2000, 38(4):828-838. 10.1046/ j.1365-2958.2000.02173.x 11115117
-
(2000)
Mol Microbiol
, vol.38
, Issue.4
, pp. 828-838
-
-
Rossier, O.1
Van den Ackerveken, G.2
Bonas, U.3
-
8
-
-
4444220080
-
New protein-protein interactions identified for the regulatory and structural components and substrates of the type III Secretion system of the phytopathogen Xanthomonas axonopodis Pathovar citri
-
515140 15342589 10.1128/JB.186.18.6186-6197.2004
-
Alegria MC Docena C Khater L Ramos CH da Silva AC Farah CS New protein-protein interactions identified for the regulatory and structural components and substrates of the type III Secretion system of the phytopathogen Xanthomonas axonopodis Pathovar citri J Bacteriol 2004, 186(18):6186-6197. 515140 15342589 10.1128/JB.186.18.6186-6197.2004
-
(2004)
J Bacteriol
, vol.186
, Issue.18
, pp. 6186-6197
-
-
Alegria, M.C.1
Docena, C.2
Khater, L.3
Ramos, C.H.4
da Silva, A.C.5
Farah, C.S.6
-
9
-
-
15144362149
-
Identification of new protein-protein interactions involving the products of the chromosome- and plasmid-encoded type IV secretion loci of the phytopathogen Xanthomonas axonopodis pv. citri
-
1065226 15774874 10.1128/JB.187.7.2315-2325.2005
-
Alegria MC Souza DP Andrade MO Docena C Khater L Ramos CH da Silva AC Farah CS Identification of new protein-protein interactions involving the products of the chromosome- and plasmid-encoded type IV secretion loci of the phytopathogen Xanthomonas axonopodis pv. citri J Bacteriol 2005, 187(7):2315-2325. 1065226 15774874 10.1128/JB.187.7.2315-2325.2005
-
(2005)
J Bacteriol
, vol.187
, Issue.7
, pp. 2315-2325
-
-
Alegria, M.C.1
Souza, D.P.2
Andrade, M.O.3
Docena, C.4
Khater, L.5
Ramos, C.H.6
da Silva, A.C.7
Farah, C.S.8
-
10
-
-
33645079391
-
Targeting of two effector protein classes to the type III secretion system by a HpaC- and HpaB-dependent protein complex from Xanthomonas campestris pv. vesicatoria
-
10.1111/j.1365-2958.2005.04924.x 16390446
-
Büttner D Lorenz C Weber E Bonas U Targeting of two effector protein classes to the type III secretion system by a HpaC- and HpaB-dependent protein complex from Xanthomonas campestris pv. vesicatoria Mol Microbiol 2006, 59(2):513-527. 10.1111/ j.1365-2958.2005.04924.x 16390446
-
(2006)
Mol Microbiol
, vol.59
, Issue.2
, pp. 513-527
-
-
Büttner, D.1
Lorenz, C.2
Weber, E.3
Bonas, U.4
-
11
-
-
17844364647
-
Dimerization of the bacterial effector protein AvrBs3 in the plant cell cytoplasm prior to nuclear import
-
10.1111/j.1365-313X.2005.02370.x 15807781
-
Gurlebeck D Szurek B Bonas U Dimerization of the bacterial effector protein AvrBs3 in the plant cell cytoplasm prior to nuclear import Plant J 2005, 42(2):175-187. 10.1111/j.1365-313X.2005.02370.x 15807781
-
(2005)
Plant J
, vol.42
, Issue.2
, pp. 175-187
-
-
Gurlebeck, D.1
Szurek, B.2
Bonas, U.3
-
13
-
-
13744253238
-
The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331 the bacterial blight pathogen of rice
-
548351 15673718 10.1093/nar/gki206
-
Lee BM Park YJ Park DS Kang HW Kim JG Song ES Park IC Yoon UH Hahn JH Koo BS Lee GB Kim H Park HS Yoon KO Kim JH Jung CH Koh NH Seo JS Go SJ The genome sequence of Xanthomonas oryzae pathovar oryzae KACC10331 the bacterial blight pathogen of rice Nucleic Acids Res 2005, 33(2):577-586. 548351 15673718 10.1093/nar/gki206
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.2
, pp. 577-586
-
-
Lee, B.M.1
Park, Y.J.2
Park, D.S.3
Kang, H.W.4
Kim, J.G.5
Song, E.S.6
Park, I.C.7
Yoon, U.H.8
Hahn, J.H.9
Koo, B.S.10
Lee, G.B.11
Kim, H.12
Park, H.S.13
Yoon, K.O.14
Kim, J.H.15
Jung, C.H.16
Koh, N.H.17
Seo, J.S.18
Go, S.J.19
-
14
-
-
33947219319
-
Interaction proteome analysis of Xanthomonas Hrp proteins
-
18051769
-
Jang M Park BC Lee DH Bae K-H Cho S Park HS Lee BR Park SG Interaction proteome analysis of Xanthomonas Hrp proteins J Microbiol Biotechnol 2007, 17:359-363. 18051769
-
(2007)
J Microbiol Biotechnol
, vol.17
, pp. 359-363
-
-
Jang, M.1
Park, B.C.2
Lee, D.H.3
Bae, K.-H.4
Cho, S.5
Park, H.S.6
Lee, B.R.7
Park, S.G.8
-
16
-
-
0007263597
-
A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21
-
10.1126/science.270.5243.1804 8525370
-
Song WY Wang GL Chen LL Kim HS Pi LY Holsten T Gardner J Wang B Zhai WX Zhu LH Fauquet C Ronald P A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21 Science 1995, 270(5243):1804-1806. 10.1126/science.270.5243.1804 8525370
-
(1995)
Science
, vol.270
, Issue.5243
, pp. 1804-1806
-
-
Song, W.Y.1
Wang, G.L.2
Chen, L.L.3
Kim, H.S.4
Pi, L.Y.5
Holsten, T.6
Gardner, J.7
Wang, B.8
Zhai, W.X.9
Zhu, L.H.10
Fauquet, C.11
Ronald, P.12
-
17
-
-
0030792253
-
SCOP: A structural classification of proteins database
-
146380 9016544 10.1093/nar/25.1.236
-
Hubbard TJ Murzin AG Brenner SE Chothia C SCOP: A structural classification of proteins database Nucleic acids research 1997, 25(1):236-239. 146380 9016544 10.1093/nar/25.1.236
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.1
, pp. 236-239
-
-
Hubbard, T.J.1
Murzin, A.G.2
Brenner, S.E.3
Chothia, C.4
-
18
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
146917 9254694 10.1093/nar/25.17.3389
-
Altschul SF Madden TL Schaffer AA Zhang J Zhang Z Miller W Lipman DJ Gapped BLAST and PSI-BLAST: A new generation of protein database search programs Nucleic acids research 1997, 25(17):3389-3402. 146917 9254694 10.1093/nar/25.17.3389
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
19
-
-
25144431896
-
Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map)
-
10.1093/bioinformatics/bti512 15914543
-
Park D Lee S Bolser D Schroeder M Lappe M Oh D Bhak J Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map) Bioinformatics (Oxford, England) 2005, 21(15):3234-3240. 10.1093/bioinformatics/bti512 15914543
-
(2005)
Bioinformatics (Oxford, England)
, vol.21
, Issue.15
, pp. 3234-3240
-
-
Park, D.1
Lee, S.2
Bolser, D.3
Schroeder, M.4
Lappe, M.5
Oh, D.6
Bhak, J.7
-
20
-
-
0035970298
-
Mapping protein family interactions: Intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast
-
10.1006/jmbi.2001.4526 11273711
-
Park J Lappe M Teichmann SA Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast Journal of molecular biology 2001, 307(3):929-938. 10.1006/jmbi.2001.4526 11273711
-
(2001)
Journal of Molecular Biology
, vol.307
, Issue.3
, pp. 929-938
-
-
Park, J.1
Lappe, M.2
Teichmann, S.A.3
-
21
-
-
21144432882
-
PSIbase: A database of Protein Structural Interactome map (PSIMAP)
-
10.1093/bioinformatics/bti366 15749693
-
Gong S Yoon G Jang I Bolser D Dafas P Schroeder M Choi H Cho Y Han K Lee S Choi H Lappe M Holm L Kim S Oh D Bhak J PSIbase: A database of Protein Structural Interactome map (PSIMAP) Bioinformatics (Oxford, England) 2005, 21(10):2541-2543. 10.1093/bioinformatics/bti366 15749693
-
(2005)
Bioinformatics (Oxford, England)
, vol.21
, Issue.10
, pp. 2541-2543
-
-
Gong, S.1
Yoon, G.2
Jang, I.3
Bolser, D.4
Dafas, P.5
Schroeder, M.6
Choi, H.7
Cho, Y.8
Han, K.9
Lee, S.10
Choi, H.11
Lappe, M.12
Holm, L.13
Kim, S.14
Oh, D.15
Bhak, J.16
-
22
-
-
0033971642
-
DIP: The database of interacting proteins
-
102387 10592249 10.1093/nar/28.1.289
-
Xenarios I Rice DW Salwinski L Baron MK Marcotte EM Eisenberg D DIP: The database of interacting proteins Nucleic acids research 2000, 28(1):289-291. 102387 10592249 10.1093/nar/28.1.289
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 289-291
-
-
Xenarios, I.1
Rice, D.W.2
Salwinski, L.3
Baron, M.K.4
Marcotte, E.M.5
Eisenberg, D.6
-
23
-
-
0033930882
-
BIND - A data specification for storing and describing biomolecular interactions, molecular complexes and pathways
-
10.1093/bioinformatics/16.5.465 10871269
-
Bader GD Hogue CW BIND - a data specification for storing and describing biomolecular interactions, molecular complexes and pathways Bioinformatics (Oxford, England) 2000, 16(5):465-477. 10.1093/ bioinformatics/16.5.465 10871269
-
(2000)
Bioinformatics (Oxford, England)
, vol.16
, Issue.5
, pp. 465-477
-
-
Bader, G.D.1
Hogue, C.W.2
-
24
-
-
9144248312
-
IntAct: An open source molecular interaction database
-
(Database) 308786 14681455 10.1093/nar/gkh052
-
Hermjakob H Montecchi-Palazzi L Lewington C Mudali S Kerrien S Orchard S Vingron M Roechert B Roepstorff P Valencia A Margalit H Armstrong J Bairoch A Cesareni G Sherman D Apweiler R IntAct: An open source molecular interaction database Nucleic acids research 2004, 32(Database):D452-455. 308786 14681455 10.1093/nar/gkh052
-
(2004)
Nucleic Acids Research
-
-
Hermjakob, H.1
Montecchi-Palazzi, L.2
Lewington, C.3
Mudali, S.4
Kerrien, S.5
Orchard, S.6
Vingron, M.7
Roechert, B.8
Roepstorff, P.9
Valencia, A.10
Margalit, H.11
Armstrong, J.12
Bairoch, A.13
Cesareni, G.14
Sherman, D.15
Apweiler, R.16
-
25
-
-
0037138406
-
MINT: A Molecular INTeraction database
-
10.1016/S0014-5793(01)03293-8 11911893
-
Zanzoni A Montecchi-Palazzi L Quondam M Ausiello G Helmer-Citterich M Cesareni G MINT: A Molecular INTeraction database FEBS letters 2002, 513(1):135-140. 10.1016/S0014-5793(01)03293-8 11911893
-
(2002)
FEBS Letters
, vol.513
, Issue.1
, pp. 135-140
-
-
Zanzoni, A.1
Montecchi-Palazzi, L.2
Quondam, M.3
Ausiello, G.4
Helmer-Citterich, M.5
Cesareni, G.6
-
26
-
-
9144236198
-
Human protein reference database as a discovery resource for proteomics
-
(Database) 308804 14681466 10.1093/nar/gkh070
-
Peri S Navarro JD Kristiansen TZ Amanchy R Surendranath V Muthusamy B Gandhi TK Chandrika KN Deshpande N Suresh S Rashmi BP Shanker K Padma N Niranjan V Harsha HC Talreja N Vrushabendra BM Ramya MA Yatish AJ Joy M Shivashankar HN Kavitha MP Menezes M Choudhury DR Ghosh N Saravana R Chandran S Mohan S Jonnalagadda CK Prasad CK Kumar-Sinha C Deshpande KS Pandey A Human protein reference database as a discovery resource for proteomics Nucleic acids research 2004, 32(Database):D497-501. 308804 14681466 10.1093/nar/gkh070
-
(2004)
Nucleic Acids Research
-
-
Peri, S.1
Navarro, J.D.2
Kristiansen, T.Z.3
Amanchy, R.4
Surendranath, V.5
Muthusamy, B.6
Gandhi, T.K.7
Chandrika, K.N.8
Deshpande, N.9
Suresh, S.10
Rashmi, B.P.11
Shanker, K.12
Padma, N.13
Niranjan, V.14
Harsha, H.C.15
Talreja, N.16
Vrushabendra, B.M.17
Ramya, M.A.18
Yatish, A.J.19
Joy, M.20
Shivashankar, H.N.21
Kavitha, M.P.22
Menezes, M.23
Choudhury, D.R.24
Ghosh, N.25
Saravana, R.26
Chandran, S.27
Mohan, S.28
Jonnalagadda, C.K.29
Prasad, C.K.30
Kumar-Sinha, C.31
Deshpande, K.S.32
Pandey, A.33
more..
-
28
-
-
0031813130
-
Pfam: Multiple sequence alignments and HMM-profiles of protein domains
-
147209 9399864 10.1093/nar/26.1.320
-
Sonnhammer EL Eddy SR Birney E Bateman A Durbin R Pfam: Multiple sequence alignments and HMM-profiles of protein domains Nucleic acids research 1998, 26(1):320-322. 147209 9399864 10.1093/nar/26.1.320
-
(1998)
Nucleic Acids Research
, vol.26
, Issue.1
, pp. 320-322
-
-
Sonnhammer, E.L.1
Eddy, S.R.2
Birney, E.3
Bateman, A.4
Durbin, R.5
-
29
-
-
13844264506
-
iPfam: Visualization of protein-protein interactions in PDB at domain and amino acid resolutions
-
10.1093/bioinformatics/bti011 15353450
-
Finn RD Marshall M Bateman A iPfam: Visualization of protein-protein interactions in PDB at domain and amino acid resolutions Bioinformatics (Oxford, England) 2005, 21(3):410-412. 10.1093/bioinformatics/bti011 15353450
-
(2005)
Bioinformatics (Oxford, England)
, vol.21
, Issue.3
, pp. 410-412
-
-
Finn, R.D.1
Marshall, M.2
Bateman, A.3
-
30
-
-
9144252016
-
The Gene Ontology Annotation (GOA) Database: Sharing knowledge in Uniprot with Gene Ontology
-
(Database) 308756 14681408 10.1093/nar/gkh021
-
Camon E Magrane M Barrell D Lee V Dimmer E Maslen J Binns D Harte N Lopez R Apweiler R The Gene Ontology Annotation (GOA) Database: Sharing knowledge in Uniprot with Gene Ontology Nucleic Acids Research 2004, 32(Database):D262-D266. 308756 14681408 10.1093/nar/gkh021
-
(2004)
Nucleic Acids Research
-
-
Camon, E.1
Magrane, M.2
Barrell, D.3
Lee, V.4
Dimmer, E.5
Maslen, J.6
Binns, D.7
Harte, N.8
Lopez, R.9
Apweiler, R.10
|