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Volumn 44, Issue 1, 2008, Pages 27-33

Phylogenetic analyses of the dinoflagellate Noctiluca scintillans based on β-tubulin and Hsp90 genes

Author keywords

Alveolates; Dinoflagellates; Noctilucae; Phylogeny; Ploidy change; Zoospore

Indexed keywords

ALVEOLATA; DINOPHYCEAE; GYMNODINIALES; NOCTILUCA SCINTILLANS; OXYRRHIS MARINA; PERKINSUS MARINUS; PROTISTA;

EID: 38749151540     PISSN: 09324739     EISSN: 16180429     Source Type: Journal    
DOI: 10.1016/j.ejop.2007.07.001     Document Type: Article
Times cited : (28)

References (30)
  • 1
    • 4143116847 scopus 로고    scopus 로고
    • Protalveolate phylogeny and systematics and the origins of Sporozoa and dinoflagellates (phylum Myzozoa nom. nov.)
    • Cavalier-Smith T., and Chao E.E. Protalveolate phylogeny and systematics and the origins of Sporozoa and dinoflagellates (phylum Myzozoa nom. nov.). Eur. J. Protistol. 40 (2004) 185-212
    • (2004) Eur. J. Protistol. , vol.40 , pp. 185-212
    • Cavalier-Smith, T.1    Chao, E.E.2
  • 2
    • 0005247675 scopus 로고
    • Fine structure of the dinoflagellate Oxyrrhis marina I. The general structure of the cell
    • Dodge J.D., and Crawford R.M. Fine structure of the dinoflagellate Oxyrrhis marina I. The general structure of the cell. Protistologica 7 (1971) 295-303
    • (1971) Protistologica , vol.7 , pp. 295-303
    • Dodge, J.D.1    Crawford, R.M.2
  • 3
    • 0001727878 scopus 로고
    • Fine structure of the dinoflagellate Oxyrrhis marina II. The flagellar system
    • Dodge J.D., and Crawford R.M. Fine structure of the dinoflagellate Oxyrrhis marina II. The flagellar system. Protistologica 7 (1971) 399-409
    • (1971) Protistologica , vol.7 , pp. 399-409
    • Dodge, J.D.1    Crawford, R.M.2
  • 4
    • 0036124759 scopus 로고    scopus 로고
    • Re-examining alveolate evolution using multiple protein molecular phylogenies
    • Fast N.M., Xue L., Bingham S., and Keeling P.J. Re-examining alveolate evolution using multiple protein molecular phylogenies. J. Eukaryot. Microbiol. 49 (2002) 30-37
    • (2002) J. Eukaryot. Microbiol. , vol.49 , pp. 30-37
    • Fast, N.M.1    Xue, L.2    Bingham, S.3    Keeling, P.J.4
  • 5
    • 84939595624 scopus 로고    scopus 로고
    • Fensome, R.A., Taylor, F.J.R., Norris, G., Sarjeant, W.A.S., Wharton, D.I., Williams, G.L., 1993. A classification of living and fossil dinoflagellates. Microplaleontology, Special Publication 7.
    • Fensome, R.A., Taylor, F.J.R., Norris, G., Sarjeant, W.A.S., Wharton, D.I., Williams, G.L., 1993. A classification of living and fossil dinoflagellates. Microplaleontology, Special Publication 7.
  • 6
    • 33748293139 scopus 로고    scopus 로고
    • New details from the complete life cycle of the red-tide dinoflagellate Noctiluca scintillans (Ehrenberg) McCartney
    • Fukuda Y., and Endoh H. New details from the complete life cycle of the red-tide dinoflagellate Noctiluca scintillans (Ehrenberg) McCartney. Eur. J. Protistol. 42 (2006) 209-219
    • (2006) Eur. J. Protistol. , vol.42 , pp. 209-219
    • Fukuda, Y.1    Endoh, H.2
  • 7
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52 (2003) 696-704
    • (2003) Syst. Biol. , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 8
    • 84939595625 scopus 로고    scopus 로고
    • Haeckel, E., 1873. Natürliche Schöpfungsgeschichte, ed. 4, Berlin, Reimer, xlvi+688pp., 16 pls.
    • Haeckel, E., 1873. Natürliche Schöpfungsgeschichte, ed. 4, Berlin, Reimer, xlvi+688pp., 16 pls.
  • 9
    • 33744738647 scopus 로고    scopus 로고
    • Hall T. (Ed)
    • In: Hall T. (Ed). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symp. Ser. 41 (1999) 95-98
    • (1999) Nucl. Acids Symp. Ser. , vol.41 , pp. 95-98
  • 10
    • 13244270095 scopus 로고    scopus 로고
    • On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes
    • Harper J.T., Waanders E., and Keeling P.J. On the monophyly of chromalveolates using a six-protein phylogeny of eukaryotes. Int. J. Syst. Evol. Microbiol. 55 (2005) 487-496
    • (2005) Int. J. Syst. Evol. Microbiol. , vol.55 , pp. 487-496
    • Harper, J.T.1    Waanders, E.2    Keeling, P.J.3
  • 11
    • 0006402034 scopus 로고
    • A new morphological interpretation of the structure of Noctiluca, and its bearing on the status of the Cystoflagellata
    • Kofoid C.A. A new morphological interpretation of the structure of Noctiluca, and its bearing on the status of the Cystoflagellata. Univ. Calif. Publ. Zool. 19 (1920) 317-334
    • (1920) Univ. Calif. Publ. Zool. , vol.19 , pp. 317-334
    • Kofoid, C.A.1
  • 12
    • 0042666874 scopus 로고    scopus 로고
    • Morphostasis in alveolate evolution
    • Leander B.S., and Keeling P.J. Morphostasis in alveolate evolution. Trends Ecol. Evol. 18 (2003) 395-402
    • (2003) Trends Ecol. Evol. , vol.18 , pp. 395-402
    • Leander, B.S.1    Keeling, P.J.2
  • 13
    • 1842422548 scopus 로고    scopus 로고
    • Early evolutionary history of dinoflagellates and apicomplexans (Alveolata) as inferred from Hsp90 and actin phylogenies
    • Leander B.S., and Keeling P.J. Early evolutionary history of dinoflagellates and apicomplexans (Alveolata) as inferred from Hsp90 and actin phylogenies. J. Phycol. 40 (2004) 341-350
    • (2004) J. Phycol. , vol.40 , pp. 341-350
    • Leander, B.S.1    Keeling, P.J.2
  • 14
    • 0025979722 scopus 로고
    • A molecular phylogeny of dinoflagellate protists (Pyrrhophyta) inferred from the sequence of 24S rRNA divergent domain D1 and D8
    • Lenaers G., Scholin C., Bhaud Y., and Saint-Hilaire D. A molecular phylogeny of dinoflagellate protists (Pyrrhophyta) inferred from the sequence of 24S rRNA divergent domain D1 and D8. J. Mol. Evol. 32 (1991) 53-63
    • (1991) J. Mol. Evol. , vol.32 , pp. 53-63
    • Lenaers, G.1    Scholin, C.2    Bhaud, Y.3    Saint-Hilaire, D.4
  • 15
    • 33846472055 scopus 로고    scopus 로고
    • Two different domains of the luciferase gene in the heterotrophic dinoflagellate Noctiluca scintillans occur as two separate genes in photosynthetic species
    • Liu L., and Hastings J.W. Two different domains of the luciferase gene in the heterotrophic dinoflagellate Noctiluca scintillans occur as two separate genes in photosynthetic species. Proc. Natl. Acad. Sci. 104 (2007) 696-701
    • (2007) Proc. Natl. Acad. Sci. , vol.104 , pp. 696-701
    • Liu, L.1    Hastings, J.W.2
  • 16
    • 0002143875 scopus 로고
    • Dinoflagellate evolution
    • Spector D.L. (Ed), Academic Press, Orlando, USA
    • Loeblich A.R. Dinoflagellate evolution. In: Spector D.L. (Ed). Dinoflagellates (1984), Academic Press, Orlando, USA 181-199
    • (1984) Dinoflagellates , pp. 181-199
    • Loeblich, A.R.1
  • 17
    • 21244437905 scopus 로고    scopus 로고
    • Reevaluation of the evolutionary position of opalinids based on 18S rDNA, and α- and β-tubulin gene phylogeny
    • Nishi A., Ishida K., and Endoh H. Reevaluation of the evolutionary position of opalinids based on 18S rDNA, and α- and β-tubulin gene phylogeny. J. Mol. Evol. 60 (2005) 695-705
    • (2005) J. Mol. Evol. , vol.60 , pp. 695-705
    • Nishi, A.1    Ishida, K.2    Endoh, H.3
  • 18
    • 0030203863 scopus 로고    scopus 로고
    • TreeView: an application to display phylogenetic trees on personal computers
    • Page R.D.M. TreeView: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12 (1996) 357-358
    • (1996) Comput. Appl. Biosci. , vol.12 , pp. 357-358
    • Page, R.D.M.1
  • 19
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic interface under mixed models
    • Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic interface under mixed models. Bioinformatics 19 (2003) 1572-1574
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 20
    • 0037217056 scopus 로고    scopus 로고
    • Multiple protein phylogenies show that Oxyrrhis marina and Perkinsus marinus are early branches of the dinoflagellate lineage
    • Saldarriaga J.F., McEwan M.L., Fast N.M., Taylor F.J.R., and Keeling P.J. Multiple protein phylogenies show that Oxyrrhis marina and Perkinsus marinus are early branches of the dinoflagellate lineage. Int. J. Syst. Evol. Microbiol. 53 (2003) 355-365
    • (2003) Int. J. Syst. Evol. Microbiol. , vol.53 , pp. 355-365
    • Saldarriaga, J.F.1    McEwan, M.L.2    Fast, N.M.3    Taylor, F.J.R.4    Keeling, P.J.5
  • 22
    • 0000057967 scopus 로고    scopus 로고
    • Small-subunit ribosomal RNA sequences from selected dinoflagellates: testing classical evolutionary hypotheses with molecular systematic methods
    • Saunders G.W., Hill D.R.A., Sexton J.P., and Andersen R.A. Small-subunit ribosomal RNA sequences from selected dinoflagellates: testing classical evolutionary hypotheses with molecular systematic methods. Plant Syst. Evol. 11 Suppl. (1997) 237-259
    • (1997) Plant Syst. Evol. , vol.11 , Issue.SUPPL , pp. 237-259
    • Saunders, G.W.1    Hill, D.R.A.2    Sexton, J.P.3    Andersen, R.A.4
  • 23
    • 0036205377 scopus 로고    scopus 로고
    • Tree-puzzle: maximum likelihood phylogenetic analysis using quarters and parallel computing
    • Schmidt H.A., Strimmer K., Vingron M., and von Haeseler A. Tree-puzzle: maximum likelihood phylogenetic analysis using quarters and parallel computing. Bioinformatics 18 (2002) 502-504
    • (2002) Bioinformatics , vol.18 , pp. 502-504
    • Schmidt, H.A.1    Strimmer, K.2    Vingron, M.3    von Haeseler, A.4
  • 25
    • 0036623258 scopus 로고    scopus 로고
    • An approximately unbiased test of phylogenetic tree selection
    • Shimodaira H. An approximately unbiased test of phylogenetic tree selection. Syst. Biol. 51 (2002) 492-508
    • (2002) Syst. Biol. , vol.51 , pp. 492-508
    • Shimodaira, H.1
  • 26
    • 0014707522 scopus 로고
    • Les ultrastructures liées aux fonctions de relation chez Noctiluca miliaris S. (Dinoflagellata)
    • Soyer M.O. Les ultrastructures liées aux fonctions de relation chez Noctiluca miliaris S. (Dinoflagellata). Z. Zellforsch. 104 (1970) 29-55
    • (1970) Z. Zellforsch. , vol.104 , pp. 29-55
    • Soyer, M.O.1
  • 27
    • 0015440451 scopus 로고
    • Les ultrastructures nucleaires de la Noctiluque (Dinoflagelle libre) au cours de la sporogenese
    • Soyer M.O. Les ultrastructures nucleaires de la Noctiluque (Dinoflagelle libre) au cours de la sporogenese. Chromosoma (Berl.) 39 (1972) 419-441
    • (1972) Chromosoma (Berl.) , vol.39 , pp. 419-441
    • Soyer, M.O.1
  • 28
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl. Acids Res. 25 (1997) 4876-4882
    • (1997) Nucl. Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 29
    • 84985266581 scopus 로고
    • A unique mitotic variation in the marine dinoflagellate Oxyrrhis marina (Pyrrophyta)
    • Triemer R.E. A unique mitotic variation in the marine dinoflagellate Oxyrrhis marina (Pyrrophyta). J. Phycol. 18 (1982) 399-411
    • (1982) J. Phycol. , vol.18 , pp. 399-411
    • Triemer, R.E.1
  • 30
    • 0035031966 scopus 로고    scopus 로고
    • A general empirical model of protein evolution derived from multiple protein families using a maximum likelihood approach
    • Whelan S., and Goldman N. A general empirical model of protein evolution derived from multiple protein families using a maximum likelihood approach. Mol. Biol. Evol. 18 (2001) 691-699
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 691-699
    • Whelan, S.1    Goldman, N.2


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