메뉴 건너뛰기




Volumn 5, Issue , 2007, Pages

Visualizing regulatory interactions in metabolic networks

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DATA ANALYSIS; DOWN REGULATION; INFORMATION PROCESSING; KINETICS; METHODOLOGY; MOLECULAR INTERACTION; REGULATORY MECHANISM; SIMULATION; SYSTEMS BIOLOGY; UPREGULATION; ALGORITHM; BIOLOGICAL MODEL; BIOLOGY; COMPUTER GRAPHICS; COMPUTER SIMULATION; ESCHERICHIA COLI; METABOLISM;

EID: 38749100629     PISSN: None     EISSN: 17417007     Source Type: Journal    
DOI: 10.1186/1741-7007-5-46     Document Type: Article
Times cited : (15)

References (19)
  • 1
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto encyclopedia of genes and genomes
    • 102409 10592173 10.1093/nar/28.1.27
    • Kanehisa MG KEGG: Kyoto encyclopedia of genes and genomes Nucleic Acids Res 2000, 28:27-30. 102409 10592173 10.1093/nar/28.1.27
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.G.1
  • 5
    • 0037316342 scopus 로고    scopus 로고
    • FluxAnalyzer: Exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps
    • 10.1093/bioinformatics/19.2.261 12538248
    • Klamt S Stelling J Ginkel M Gilles E FluxAnalyzer: Exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps Bioinformatics 2003, 19:261-269. 10.1093/bioinformatics/ 19.2.261 12538248
    • (2003) Bioinformatics , vol.19 , pp. 261-269
    • Klamt, S.1    Stelling, J.2    Ginkel, M.3    Gilles, E.4
  • 6
    • 34447551397 scopus 로고    scopus 로고
    • Structural and functional analysis of cellular networks with CellNetAnalyzer
    • 1847467 17408509 10.1186/1752-0509-1-2
    • Klamt S Saez-Rodriguez J Gilles ED Structural and functional analysis of cellular networks with CellNetAnalyzer BMC Syst Biol 2007, 1:2. 1847467 17408509 10.1186/1752-0509-1-2
    • (2007) BMC Syst Biol , vol.1 , pp. 2
    • Klamt, S.1    Saez-Rodriguez, J.2    Gilles, E.D.3
  • 7
    • 33746143171 scopus 로고    scopus 로고
    • Visualisation of biochemical network simulations with SimWiz
    • Rost U Kummer U Visualisation of biochemical network simulations with SimWiz IEE Proc Syst Biol 2004, 1:184-189.
    • (2004) IEE Proc Syst Biol , vol.1 , pp. 184-189
    • Rost, U.1    Kummer, U.2
  • 9
    • 33645241830 scopus 로고    scopus 로고
    • VANTED: A system for advanced data analysis and visualization in the context of biological networks
    • 1413562 16519817 10.1186/1471-2105-7-109
    • Junker BH Klukas C Schreiber F VANTED: A system for advanced data analysis and visualization in the context of biological networks BMC Bioinformatics 2006, 7:109. 1413562 16519817 10.1186/1471-2105-7-109
    • (2006) BMC Bioinformatics , vol.7 , pp. 109
    • Junker, B.H.1    Klukas, C.2    Schreiber, F.3
  • 10
    • 24644468500 scopus 로고    scopus 로고
    • Visualizing related metabolic pathways in two and a half dimensions
    • Berlin: Springer Berlin: Springer Lecture Notes in Computer Science
    • Brandes U Dwyer T Schreiber F Visualizing related metabolic pathways in two and a half dimensions Proceedings of the 11th International Symposium on Graph Drawing Berlin: Springer 2003. 2192 Lecture Notes in Computer Science
    • (2003) Proceedings of the 11th International Symposium on Graph Drawing , vol.2192
    • Brandes, U.1    Dwyer, T.2    Schreiber, F.3
  • 13
    • 0343907200 scopus 로고    scopus 로고
    • In vivo analysis of metabolic dynamics in Sacharomyces cerevisiae: II. Mathematical model
    • 10.1002/(SICI)1097-0290(19970820)55:4<592::AID-BIT2>3.0.CO;2-C
    • Rizzi M Baltes M Theobald U Reuss M In vivo analysis of metabolic dynamics in Sacharomyces cerevisiae: II. Mathematical model Biotechnol Bioeng 1997, 55:592-608. 10.1002/ (SICI)1097-0290(19970820)55:4<592::AID-BIT2>3.0.CO;2-C
    • (1997) Biotechnol Bioeng , vol.55 , pp. 592-608
    • Rizzi, M.1    Baltes, M.2    Theobald, U.3    Reuss, M.4
  • 14
    • 0037025146 scopus 로고    scopus 로고
    • Dynamic modeling of the central carbon metabolism of Escherichia coli
    • 10.1002/bit.10288 17590932
    • Chassagnole C Noisommit-Rizzi N Schmid JW Mauch K Reuss M Dynamic modeling of the central carbon metabolism of Escherichia coli Biotechnol Bioeng 2002, 79:53-73. 10.1002/bit.10288 17590932
    • (2002) Biotechnol Bioeng , vol.79 , pp. 53-73
    • Chassagnole, C.1    Noisommit-Rizzi, N.2    Schmid, J.W.3    Mauch, K.4    Reuss, M.5
  • 15
    • 17444372421 scopus 로고    scopus 로고
    • Investigating the dynamic behavior of biochemical networks using model families
    • 10.1093/bioinformatics/bti225 15604106
    • Haunschild MD Freisleben B Takors R Wiechert W Investigating the dynamic behavior of biochemical networks using model families Bioinformatics 2005, 21:1617-1625. 10.1093/bioinformatics/bti225 15604106
    • (2005) Bioinformatics , vol.21 , pp. 1617-1625
    • Haunschild, M.D.1    Freisleben, B.2    Takors, R.3    Wiechert, W.4
  • 16
    • 33645735456 scopus 로고    scopus 로고
    • From enzyme kinetics to metabolic network modeling-visualization tool for enhanced kinetic analysis of biochemical network models
    • 10.1002/elsc.200620911
    • Oldiges M Noack S Wahl A Qeli E From enzyme kinetics to metabolic network modeling-visualization tool for enhanced kinetic analysis of biochemical network models Eng Life Sci 2006, 6:155-162. 10.1002/ elsc.200620911
    • (2006) Eng Life Sci , vol.6 , pp. 155-162
    • Oldiges, M.1    Noack, S.2    Wahl, A.3    Qeli, E.4
  • 17
    • 0020435576 scopus 로고
    • Phosphofructokinase from yeast
    • 6218374
    • Hofmann E Kopperschlaeger G Phosphofructokinase from yeast Meth Enzymol 1982, 90:49-60. 6218374
    • (1982) Meth Enzymol , vol.90 , pp. 49-60
    • Hofmann, E.1    Kopperschlaeger, G.2
  • 18
    • 28844486003 scopus 로고    scopus 로고
    • The AraC-type regulator RipA represses aconitase and other iron proteins from Corynebacterium under iron limitation and is itself repressed by DtxR
    • 10.1074/jbc.M508693200 16179344
    • Wennerhold J Krug A Bott M The AraC-type regulator RipA represses aconitase and other iron proteins from Corynebacterium under iron limitation and is itself repressed by DtxR J Biol Chem 2005, 280:40500-40508. 10.1074/jbc.M508693200 16179344
    • (2005) J Biol Chem , vol.280 , pp. 40500-40508
    • Wennerhold, J.1    Krug, A.2    Bott, M.3
  • 19
    • 33744950488 scopus 로고    scopus 로고
    • Corynebacterial protein kinase G controls 2-oxoglutarate dehydrogenase activity via the phosphorylation status of the OdhI protein
    • 10.1074/jbc.M512515200 16522631
    • Niebisch A Kabus A Schultz C Weil B Bott M Corynebacterial protein kinase G controls 2-oxoglutarate dehydrogenase activity via the phosphorylation status of the OdhI protein J Biol Chem 2006, 281:12300-12307. 10.1074/jbc.M512515200 16522631
    • (2006) J Biol Chem , vol.281 , pp. 12300-12307
    • Niebisch, A.1    Kabus, A.2    Schultz, C.3    Weil, B.4    Bott, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.