An expanded comparative map of bovine chromosome 27 targeting dairy form QTL regions

Animal Genetics

Volumn 35, Issue 4, 2004, Pages 265-269

  Connor, E E ^a   Sonstegard, T S ^a   Ashwell, M S ^a   Bennett, G L ^b   Williams, J L ^c  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b U S MEAT ANIMAL RESEARCH CENTER   (United States)

^c UNIVERSITY OF EDINBURGH   (United Kingdom)

Author keywords

Comparative mapping; Dairy form; RH mapping; SNP

Indexed keywords

MICROSATELLITE DNA; PRIMER DNA;

ANIMAL; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; BODY CONSTITUTION; CATTLE; CHROMOSOME; CHROMOSOME MAP; COMPARATIVE STUDY; DAIRYING; DNA SEQUENCE; GENETICS; HUMAN; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; QUANTITATIVE TRAIT LOCUS; RADIATION HYBRID MAPPING; SYNTENY;

ANIMALS; BASE SEQUENCE; BODY CONSTITUTION; CATTLE; CHROMOSOME MAPPING; CHROMOSOMES, ARTIFICIAL, BACTERIAL; CHROMOSOMES, MAMMALIAN; DAIRYING; DNA PRIMERS; HUMANS; MICROSATELLITE REPEATS; MOLECULAR SEQUENCE DATA; QUANTITATIVE TRAIT LOCI; RADIATION HYBRID MAPPING; SEQUENCE ANALYSIS, DNA; SYNTENY;

ANIMALIA; BACTERIA (MICROORGANISMS); BOS TAURUS; BOVINAE; MAMMALIA;

EID: 3843107877     PISSN: 02689146     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1365-2052.2004.01151.x     Document Type: Article

References (18)

1. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Zhang Z., Miller W. & Lipman D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25, 3389-402.
2. Ashwell M.S., Da Y., Van Tassell C.P., Vanraden P.M., Miller R.H. & Rexroad C.E. Jr. (1998) Detection of putative loci affecting conformational type traits in an existing Holstein population using microsatellite markers. Journal of Dairy Science 81, 1120-5.
3. Ashwell M.S., Van Tassell C.P. & Sonstegard T.S. (2001) A genome scan to identify quantitative trait loci affecting economically important traits in a US Holstein population. Journal of Dairy Science 84, 2535-42.
4. Band M.R., Larson J.H., Rebeiz M. et al. (2000) An ordered comparative map of the cattle and human genomes. Genome Research 10, 1359-68.
5. Bishop M.D., Kappes S.M., Keele J.W. et al. (1994) A genetic linkage map for cattle. Genetics 136, 619-39.
6. Castelo A.T., Martins W. & Gao G.R. (2002) TROLL - tandem repeat occurrence locator. Bioinformatics 18, 634-6.
7. Greene P., Falls K. & Crooks S. (1990) CRI-MAP Documentation. version 2.4. Available at: http://linkage.rockefeller.edu/soft/cri-map/.
8. Hansen M., Lund M.S., Sorenson M.K. & Christensen L.G. (2002) Genetic parameters of dairy character, protein yield, clinical mastitis, and other diseases in the Danish Holstein cattle. Journal of Dairy Science 85, 445-52.
9. Konfortov B.A. & Miller J.R. (1998) Carboxypeptidase E gene in bovine is located on chromosome 17. Animal Genetics 29(Suppl. 1, 35.
10. Lange K., Boehnke M., Cox D.R. & Lunetta K.L. (1995) Statistical methods for polypoid radiation hybrid mapping. Genome Research 5, 136-50.
11. Lassen J., Hansen M., Sorensen M.K., Aamand G.P. Christensen L.G. & Madsen P. (2003) Genetic relationship between body condition score, dairy character, mastitis, and diseases other than mastitis in first-parity Danish Holstein cows. Journal of Dairy Science 86, 3730-5.
12. Norman H.D., Powell R.L., Wright J.R. & Cassell B.C. (1988) Phenotypic and genetic relationship between linear functional type traits and milk yield for five breeds. Journal of Dairy Science 71, 1880-96.
13. Rogers G.W., Banos G. & Sander-Nielsen U. (1999) Genetic correlations among protein yield, productive life, and type traits from the United States and diseases other than mastitis from Denmark and Sweden. Journal of Dairy Science 82, 1331-8.
14. Short T.H. & Lawlor T.J. (1992) Genetic parameters of conformational traits, milk yield, and herd life in Holsteins. Journal of Dairy Science 75, 1987-98.
15. Sonstegard T.S., Garrett W.M., Ashwell M.S., Bennett G.L., Kappes S.M. & Van Tassell C.P. (2000) Comparative map alignment of BTA27 and HSA4 and 8 to identify conserved segments of genome containing fat deposition QTL. Mammalian Genome 11, 682-8.
16. Van Tassell C.P., Sonstegard T.S. & Ashwell M.S. (2004) Mapping quantitative trait loci affecting dairy conformation to chromosome 27 in two Holstein grandsire families. Journal of Dairy Science 87, 450-7.
17. Warren W., Smith T.P., Rexroad C.E. III, Fahrenkrug S.C., Allison T., Shu C.L., Catanese J. & de Jong P.J. (2000) Construction and characterization of a new bovine bacterial artificial chromosome library with 10 genome-equivalent coverage. Mammalian Genome 11, 662-3.
18. Williams J.L., Eggen A., Feretti L. et al. (2002) A bovine whole-genome radiation hybrid panel and outline map. Mammalian Genome 13, 469-74.