Isolation and characterization of Bacillus thuringiensis strains from olive-related habitats in Turkey

Journal of Applied Microbiology

Volumn 104, Issue 2, 2008, Pages 515-525

  Cinar, C ^a   Apaydin, O ^a   Yenidunya, A F ^b   Harsa, S ^a   Gunes, H ^c  

^a IZMIR INSTITUTE OF TECHNOLOGY   (Turkey)

^b CUMHURIYET UNIVERSITY   (Turkey)

^c MUGLA SITKI KOCMAN UNIVERSITY   (Turkey)

Author keywords

16S internal transcribed spacer rDNA restriction fragment length polymorphism; Bacillus thuringiensis; Characterization; Crystal protein; Olive related habitats; Polymerase chain reaction

Indexed keywords

BACTERIOLOGY; ECOSYSTEMS; OLIVE OIL; POLYMORPHISM; TRANSCRIPTION;

16S-INTERNAL TRANSCRIBED SPACER RDNA RESTRICTION FRAGMENT LENGTH POLYMORPHISM; BACILLUS THURINGIENSIS; CHARACTERIZATION; CRYSTAL PROTEINS; CRYSTAL SHAPES; INTERNAL TRANSCRIBED SPACERS; ISOLATION AND CHARACTERIZATION; OLIVE-RELATED HABITAT; RESTRICTION FRAGMENT LENGTH POLYMORPHISMS; THURINGIENSIS;

POLYMERASE CHAIN REACTION;

ABUNDANCE; BACTERIUM; EVERGREEN TREE; FECES; GENETIC VARIATION; GENOTYPE; IDENTIFICATION METHOD; LEAF; MORPHOLOGY; SOIL MICROORGANISM;

ARTICLE; BACILLUS THURINGIENSIS; BACTERIAL STRAIN; CRYSTAL STRUCTURE; GENE ISOLATION; GENOTYPE; HABITAT; NONHUMAN; POLYMERASE CHAIN REACTION; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; TURKEY (REPUBLIC);

EURASIA; TURKEY;

ANIMALIA; BACILLUS THURINGIENSIS;

EID: 38349179668     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2007.03571.x     Document Type: Article

References (50)

1. Akbalik, G., Gunes, H., Yavuz, E., Yasa, I., Harsa, S., Elmaci, Z.S. Yenidunya, A.F. (2004) Identification of extracellular enzyme producing alkalophilic bacilli from Izmir province by 16S-ITS rDNA RFLP. J Appl Microbiol 97, 766 773.
2. Alberola, T.M., Aptosoglou, S., Arsenakis, M., Bel, Y., Delrio, G., Ellar, D.J., Ferré, J., Granero, F. et al. (1999) Insecticidal activity of strains of Bacillus thuringiensis on larvae and adults of Bactrocera oleae Gmelin (Dipt. Tephritidae). J Invertebr Pathol 74, 127 136.
3. Alcaide, E.M. Nefzaoui, A. (1996) Recycling of olive oil by-products: possibilities of utilization in animal nutrition. Int Biodeterior Biodegradation 38, 227 235.
4. Apaydin, Ö, Yenidünya, A.F., Harsa, Ş. Güneş, H. (2005) Isolation and characterization of Bacillus thuringiensis from different grain habitats in Turkey. World J Microbiol Biotech 21, 285 292.
5. Armengol, G., Escobar, M.C., Maldonado, M.E. Orduz, S. (2007) Diversity of Colombian strains of Bacillus thuringiensis with insecticidal activity against dipteran and lepidopteran insects. J Appl Microbiol, 102, 77 88.
6. Ausubel, F.M., Brent, R., Kingston, R.E., Moore, D.D., Seidmann, J.G., Smith, J.A. Struhl, K. (1994) Current Protocols in Molecular Biology, chapter 2. New York : John Wiley & Sons Inc.
7. Bel, Y., Granero, F., Alberola, T.M., Martinez-Sebastián, M.J. Ferré, J. (1997) Distribution, frequency and diversity of Bacillus thuringiensis in olive tree environments in Spain. Syst Appl Microbiol 20, 652 658.
8. Ben-Dov, E., Zariritsky, A., Dahan, E., Barak, Z., Sinal, R., Manasherob, R., Khamraev, A., Troitskaya, E. et al. (1997) Extended screening by PCR for seven cry-group genes from field-collected strains of Bacillus thuringiensis. Appl Environ Microbiol 63, 4883 4890.
9. Bravo, A., Sarabia, S., Lopez, L., Ontiveros, H., Abarca, C., Ortiz, A., Ortiz, M., Lina, L. et al. (1998) Characterization of cry genes in a Mexican Bacillus thuringiensis strain collection. Appl Environ Microbiol 64, 4965 4972.
10. Cabras, P., Anglont, A., Mehs, M., Minelli, E.V. Pirisi, F.M. (1997) Simplified multiresidue method for the determination of organophosphorus insecticides in olive oil. J Chromatogr 761, 327 331.
11. Cardinal, M.J., Meghrous, J., Lacroix, C. Simard, R.E. (1997) Isolation of Lactobacillus lactis strains producing inhibitory activity against Listeria. Food Biotech 11, 129 146.
12. Carlson, C.R., Johansen, T. Kolstø, A.-B. (1996) The chromosome map of Bacillus thuringiensis subsp. canadensis HD224 is highly similar to that of the Bacillus cereus type strain ATCC14579. FEMS Microbiol Lett 141, 163 167.
13. Chak, K.F., Chao, D.C., Tseng, M.Y., Kao, S.S., Tuan, S.J. Feng, T.Y. (1994) Determination and distribution of cry-type genes of Bacillus thuringiensis isolates from Taiwan. Appl Environ Microbiol 60, 2415 2420.
14. Chen, F., Tsai, M., Peng, C. Chak, K. (2004) Dissection of cry gene profiles of Bacillus thuringiensis isolates in Taiwan. Curr Microbiol 48, 270 275.
15. Crickmore, N., Zeigler, D.R., Feitelson, J., Schnepf, E., Van-Rie, J., Lereclus, D., Baum, J. Dean, D.H. (1998a) Revision of nomenclature for the Bacillus thuringiensis pesticidal crystal proteins. Microbiol Mol Biol Rev 62, 807 813.
16. Crickmore, N., Zeigler, D.R., Feitelson, J., Schnepf, E., Van-Rie, J., Lereclus, D., Baum, J. Dean, D.H. (1998b) Bacillus thuringiensis toxin nomenclature http://www.biols.susx.ac.uk/Home/Neil Crickmore/Bt/index.html
17. Delucca, A.J., Palmgren, M.S. Ciegler, A. (1982) Bacillus thuringiensis in grain elevator dusts. Can J Microbiol 28, 452 456.
18. Dulmage, H.T. Aizawa, K. (1982) Distribution of Bacillus thuringiensis in nature. In Microbial and Viral Pesticides ed Kurstak, E. pp. 209 237 New York : Marcel Dekker Inc.
19. Feitelson, J.S. (1993) The Bacillus thuringiensis family tree. In Advanced Engineered Pesticides ed Kim, L. pp. 63 72 New York : Marcel Dekker Inc.
20. Ferrandis, M.D., Juárez-Pérez, V.M., Bel, Y. Férre, J. (1999) Distribution of cryI, cryII, and cryV genes within Bacillus thuringiensis strains from Spain. Syst Appl Microbiol 28, 440 444.
21. Gonzáles, J.M. Jr., Brown, B.J. Carlton, B.C. (1982) Transfer of Bacillus thuringiensis plasmids coding for delta-endotoxin among strains of Bacillus thuringiensis and Bacillus cereus. Proc Natl Acad Sci USA 79, 6951 6955.
22. Guerchicoff, A., Delecluse, A. Rubinstein, C.P. (2001) The Bacillus thuringiensis cyt genes for haemolytic endotoxins constitute a gene family. Appl Environ Microbiol 67, 1090 1096.
23. Höfte, H. Whiteley, H.R. (1989) Insecticidal crystal proteins of Bacillus thuringiensis. Microbiol Rev 53, 242 255.
24. Hongyu, Z., Ziniu, Y. Wangxi, D. (2000) Composition and ecological distribution of Cry proteins and their genotypes of Bacillus thuringiensis isolates from warehouses in China. J Invertebr Pathol 76, 191 197.
25. Ibarra, J.E., del Rincón, M.C., Ordúz, S., Noriega, D., Benintende, G., Monnerat, R., Regis, L., de Oliveira, C.M.F. et al. (2003) Diversity of Bacillus thuringiensis strains from Latin America with insecticidal activity against different mosquito species. Appl Environ Microbiol 69, 5269 5274.
26. Jensen, M.A., Webster, J.A. Straus, N. (1993) Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphisms. Appl Environ Microbiol 59, 943 952.
27. Joung, K.-B. Côté, J.-C. (2002) A single phylogenetic analysis of Bacillus thuringiensis strains and bacilli species inferred from 16S rRNA gene restriction fragment length polymorphism is congruent with two independent phylogenetic analyses. J Appl Microbiol 93, 1075 1082.
28. Karamanlidou, G., Lambropoulos, A.F., Koliais, S.I., Manousis, T., Ellar, D. Kastritsis, C. (1991) Toxicity of Bacillus thuringiensis to laboratory populations of the olive fruit fly (Dacus olaea). Appl Environ Microbiol 57, 2277 2282.
29. Kim, H.S. (2000) Comparative study of the frequency, flagellar serotype, crystal shape, toxicity, and cry gene contents of Bacillus thuringiensis from three environments. Curr Microbiol 41, 250 256.
30. Maduell, A., Callejas, R., Cabrera, K.R., Armengol, G. Orduz, S. (2002) Distribution and characterization of Bacillus thuringiensis on the phylloplane of species of piper (Piperaceae) in three altitudinal levels. Microb Ecol 44, 144 153.
31. Maeda, M., Mizuki, E., Nakamura, Y., Hatano, T. Ohba, M. (2000) Recovery of Bacillus thuringiensis from marine sediments of Japan. Curr Microbiol 40, 413 422.
32. Martin, P.A.W. Travers, R.S. (1989) Worldwide abundance and distribution of Bacillus thuringiensis isolates. Appl Environ Microbiol 55, 2437 2442.
33. Martinez, C., Ibarra, J.E. Caballero, P. (2005) Association analysis between serotype, cry gene content, and toxicity to Helicoverpa armigera larvae among Bacillus thuringiensis isolates native to Spain. J Invertebr Pathol 90, 91 97.
34. Mizuki, E., Ichimatsu, T., Hwang, S.-H., Park, Y.S., Saitoh, H., Higuchi, K. Ohba, M. (1999) Ubiquity of Bacillus thuringiensis on phylloplanes of arboreous and herbaceous plants in Japan. J Appl Microbiol 86, 979 984.
35. Mora, B., Fortina, M.G., Nicastro, G., Parini, C. Mananchini, P.L. (1998) Genotypic characterization of thermophilic bacilli: a study on new soil isolates and several reference strains. Res Microbiol 149, 711 722.
36. Nei, M. Li, W-H. (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci USA 76, 5269 5273.
37. O'Sullivan, D.J. Klaenhammer, T.R. (1993) Rapid mini-prep. isolation of high-quality plasmid DNA from Lactococcus and Lactobacillus spp. Appl Environ Microbiol 59, 2730 2733.
38. Ohba, M. Aizawa, K. (1986) Insect toxicity of Bacillus thuringiensis isolated from soils of Japan. J Invertebr Pathol 47, 12 20.
39. Porcar, M. Cabellaro, P. (2000) Molecular and insecticidal characterization of a Bacillus thuringiensis strain isolated during a natural epizootic. J Appl Microbiol 89, 309 316.
40. Schnepf, E., Crickmore, N., van Rie, J., Lereclus, D., Baum, J., Feitelson, J., Zeigler, D.R. Dean, D.H. (1998) Bacillus thuringiensis and its insecticidal proteins. Microbiol Mol Biol Rev 62, 774 806.
41. Shisa, N., Wasano, N., Ohgushi, A., Lee, D.-H. Ohba, M. (2002) Extremely high frequency of common flagellar antigens between Bacillus thuringiensis and Bacillus cereus. FEMS Microbiol Lett 213, 93 96.
42. Smith, R.A. Couche, G.A. (1991) The phylloplane as a source of Bacillus thuringiensis variants. Appl Environ Microbiol 57, 311 315.
43. Thomas, D.J.I., Morgan, A.W., Whipps, J.M. Saunders, J.R. (2000) Plasmid transfer between the Bacillus thuringiensis subspecies kurstaki and tenebrionis in laboratory culture and soil and in lepidopteran and coleopteran larvae. Appl Environ Microbiol 66, 118 124.
44. Travers, R.S., Martin, A.P.W. Reichelderfer, C.F. (1987) Selective process for efficient isolation of soil Bacillus sp. Appl Environ Microbiol 53, 1263 1266.
45. Uribe, D., Martinez, W. Ceron, J. (2003) Distribution and diversity of cry genes in native strains of Bacillus thuringiensis obtained from different ecosystems from Colombia. J Invertebr Pathol 82, 119 127.
46. Vilas-Bo̧as, L., Vilas-Bo̧as, G.F.L.T., Saridakis, H.O., Lemos, M.V.F., Lereclus, D. Arantes, O.M.N. (2000) Survival and conjugation of Bacillus thuringiensis in a soil microcosm. FEMS Microbiol Ecol 31, 255 259.
47. Wang, J., Boets, A., van Rie, J. Ren, G. (2003) Characterization of cry1, cry2 and cry9 genes in Bacillus thuringiensis isolates from China. J Invertebr Pathol 82, 63 71.
48. Yavuz, E., Gunes, H., Harsa, S. Yenidunya, A.F. (2004a) Identification of extracellular enzyme producing thermophilic bacilli from Balcova (Agamemnon) Geothermal Site by 16S-ITSrDNA RFLP. J Appl Microbiol 97, 810 817.
49. Yavuz, E., Gunes, H., Bulut, C., Harsa, S. Yenidunya, A.F. (2004b) RFLP of 16S-ITS rDNA region to differentiate Lactobacilli at species level. World J Microbiol Biotech 20, 535 537.
50. Zhang, H.Y., Yu, Z.N. Deng, W.X. (2000) Isolation, distribution and toxicity of Bacillus thuringiensis from warehouses in China. Crop Prot 19, 449 454.