Analysis of DNA methylation variation in wheat genetic background after alien chromatin introduction based on methylation-sensitive amplification polymorphism

Chinese Science Bulletin

Volumn 53, Issue 1, 2008, Pages 58-69

  Zhang, Yong ^a,b   Liu, Zhaohui ^a   Liu, Cheng ^a   Yang, Zujun ^a   Deng, Kejun ^a   Peng, Jinhua ^a   Zhou, Jianping ^a   Li, Guangrong ^a   Tang, Zongxiang ^b   Ren, Zhenglong ^a,b  

^a UNIVERSITY OF ELECTRONIC SCIENCE AND TECHNOLOGY OF CHINA   (China)

^b SICHUAN AGRICULTURAL UNIVERSITY   (China)

Author keywords

Chromosome translocation lines; DNA methylation; Epigenetics; Methylation sensitive amplification polymorphism; Secale cereale; Triticum aestivum

Indexed keywords

SECALE CEREALE; TRITICUM AESTIVUM;

EID: 38149118032     PISSN: 10016538     EISSN: 18619541     Source Type: Journal    
DOI: 10.1007/s11434-008-0049-3     Document Type: Article

References (29)

1. Saze H, Mittelsten Scheid O, Paszkowski J. Maintenance of CpG methylation is essential for epigenetic inheritance during plant gametogenesis. Nat Genet, 2003, 34(1): 65-69
2. Guimil S, Dunand C. Patterning of Arabidopsis epidermal cells: Epigenetic factors regulate the complex epidermal cell fate pathway. Trends Plant Sci, 2006, 11(12): 601-609
3. Madlung A, Masuelli R W, Watson B, et al. Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids. Plant Physiol, 2002, 129: 733-746
4. Chan S W L, Henderson I R, Jacobsen S E. Gardening the genome: DNA methylation Arabidopsis thaliana. Nat Rev Genet, 2005, 6: 351-360
5. Xiao W, Custard K D, Brown R C, et al. DNA methylation is critical for Arabidopsis embryogenesis and seed viability. Plant Cell, 2006, 18(4): 805-814
6. Jullien P E, Kinoshita T, Ohad N, et al. Maintenance of DNA methylation during the Arabidopsis life cycle is essential for parental imprinting. Plant Cell, 2006, 18(6): 1360-1372
7. Adams K L, Percifield R, Wendel J F. Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid. Genetics, 2004, 168: 2217-2226
8. Salmon A, Ainouche M L, Wendel J F. Genetic and epigenetic consequences of recent hybridization and polyploidy in Spartina (Poaceae). Mol Ecol, 2005, 14: 1163-1175
9. Liu Z, Wang Y, Shen Y, et al. Extensive alterations in DNA methylation and transcription in rice caused by introgression from Zizania latifolia. Plant Mol Biol, 2004, 54(4): 571-582
10. Dong Z Y, Wang Y M, Zhang Z J, et al. Extent and pattern of DNA methylation alteration in rice lines derived from introgressive hybridization of rice and Zizania latifolia Griseb. Theor Appl Genet, 2006, 113: 196-205
11. Schob H, Grossniklaus U. The first high-resolution DNA "methylome". Cell, 2006, 126(6): 1025-1028
12. Ren Z L. Introduction of rye chromatin into wheat and its breeding behavior. Scientia Agricultura Sinica, 1991, 24(3): 18-25
13. Ren Z L. Effect of wheat genetic background on the expression of the rye gene Lr26 for resistance to leaf rust in wheat. Acta Genetica Sinica, 1993, 20(4): 312-316
14. Ren Z L, Zhang H Q. Induction of small-segment-translocation between wheat and rye chromosomes. Sci China Ser C-Life Sci, 1997, 27(3): 258-263
15. Reyna-Lopez G E, Simpson J, Ruiz-Herrera J. Differences in DNA methylation patterns are detectable during the dimorphic transition of fungi by amplification of restriction polymorphisms. Mol Gen Genet, 1997, 253: 703-710
16. Tang Z X, Ren Z L, Wu F, et al. The selection of transgenic recipients from new elite wheat cultivars and study on its plant regeneration system. Agri Sci China, 2006, 5(6): 417-427
17. Murray M G, Thompson W F. Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res, 1980, 8(19): 4321-4325
18. Zhang Y, Zhang S G, Qi L W, et al. Chromosome microdissection, cloning and painting of the chromosome 1 in poplar (Populus tremula). Silvae Genetica, 2005, 54(4-5): 211-217
19. Froidmont D. A co-dominant marker for the 1BL/1RS wheat-rye translocation via multiplex PCR. J Cereal Sci, 1998, 27: 229-232
20. Chai J F, Zhou R H, Jia J Z, et al. Development and application of a new codominant PCR marker for detecting 1BL/1RS wheat-rye chromosome translocations. Plant Breed, 2006, 125: 302-304
21. Vos P, Hogers R, Bleeker M, et al. AFLP: A new techique for DNA fingerprinting. Nucleic Acids Res, 1995, 23: 4407-4414
22. Bassam B J, Caetano-Anolles G, Gresshoff P M. Fast and sensitive silver straining of DNA in polyacrylamide gels. Anal Biochem, 1991, 196: 80-83
23. Xiong L Z, Xu C G, Maroof M A S, et al. Patterns of cytosine methylation in an elicite hybrid and its parental lines, detected by a methylation-sensitive amplification polymorphism technique. Mol Genet Genomics, 1999, 26: 439-446
24. Shaked H, Kashkush K, Ozkan H, et al. Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat. Plant Cell, 2001, 13: 1749-1759
25. He P, Friebe B R, Gill B S, et al. Allopolyploidy alters gene expression in the highly stable hexaploid wheat. Plant Mol Biol, 2003, 52: 401-414
26. Ma X F, Fang P, Gustafson J P. Polyploidization-induced genome variation in triticale. Genome, 2004, 47: 839-848
27. Zhao X X, Chai Y, Liu B. Epigenetic inheritance and variation of DNA methylation level and pattern in maize intra-specific hybrids. Plant Sci, 2007, 172: 930-938
28. Cheng C, Daigen M, Hirochika H. Epigenetic regulation of the rice retrotransposon Tos17. Mol Genet Genomics, 2006, 276(4): 378-390
29. Uauy C, Distelfeld A, Fahima T, et al. A NAC gene regulating senescence improves grain protein, zinc, and iron content in wheat. Science, 2006, 314: 1298-1301