-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schäffer, A. A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D. J. (1997). Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0033954256
-
The Protein Data Bank
-
Berman, H. M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T. N., Weissig, H., Shindyalov, I. N. and Bourne, P. E. (2000). The Protein Data Bank. Nucleic Acids Res. 28, 235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
3
-
-
0013852463
-
Structure of hen egg-white lysozyme. a three-dimensional Fourier synthesis at 2 Angstrom resolution
-
Blake, C. C., Koenig, D. F., Mair, G. A., North, A. C., Phillips, D. C. and Sarma, V. R. (1965). Structure of hen egg-white lysozyme. a three-dimensional Fourier synthesis at 2 Angstrom resolution. Nature 206, 757-761.
-
(1965)
Nature
, vol.206
, pp. 757-761
-
-
Blake, C.C.1
Koenig, D.F.2
Mair, G.A.3
North, A.C.4
Phillips, D.C.5
Sarma, V.R.6
-
4
-
-
84860507958
-
Three-stage prediction of protein β-sheets by neural networks, alignments and graph algorithms
-
Cheng, J. and Baldi, P. (2005). Three-stage prediction of protein β-sheets by neural networks, alignments and graph algorithms. Bioinformatics 21 Suppl. 1, i75-i84.
-
(2005)
Bioinformatics
, vol.21
, Issue.SUPPL. 1
-
-
Cheng, J.1
Baldi, P.2
-
5
-
-
0033578684
-
Protein secondary structure prediction based on position-specific scoring matrices
-
Jones, D. T. (1999). Protein secondary structure prediction based on position-specific scoring matrices. J. Mol. Biol. 292, 195-202.
-
(1999)
J. Mol. Biol
, vol.292
, pp. 195-202
-
-
Jones, D.T.1
-
6
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch, W. and Sander, C. (1983). Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22, 2577-2637.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
7
-
-
0141593924
-
Protein secondary structure prediction based on an improved support vector machines approach
-
Kim, H. and Park, H. (2003). Protein secondary structure prediction based on an improved support vector machines approach. Protein Eng. 16, 553-560.
-
(2003)
Protein Eng
, vol.16
, pp. 553-560
-
-
Kim, H.1
Park, H.2
-
8
-
-
30344467519
-
Generalized protein structure prediction based on combination of fold-recognition and de novo folding with evaluation of models
-
Kolinski, A. and Bujnicki, J. M. (2005). Generalized protein structure prediction based on combination of fold-recognition and de novo folding with evaluation of models. Proteins 61, Suppl. 7, 84-90.
-
(2005)
Proteins
, vol.61
, Issue.SUPPL. 7
, pp. 84-90
-
-
Kolinski, A.1
Bujnicki, J.M.2
-
9
-
-
33645964629
-
Protein fold recognition using segmentation conditional random fields (SCRFs)
-
Liu, Y., Carbonell, J., Weigele, P. and Gopalakrishnan, V. (2006). Protein fold recognition using segmentation conditional random fields (SCRFs). J. Comput. Biol. 13, 394-406.
-
(2006)
J. Comput. Biol
, vol.13
, pp. 394-406
-
-
Liu, Y.1
Carbonell, J.2
Weigele, P.3
Gopalakrishnan, V.4
-
10
-
-
0016772212
-
Comparison of the predicted and observed secondary structure of T4 phage lysozyme
-
Matthews, B. W. (1975). Comparison of the predicted and observed secondary structure of T4 phage lysozyme. Biochim. Biophys. Acta 405 442-451.
-
(1975)
Biochim. Biophys. Acta
, vol.405
, pp. 442-451
-
-
Matthews, B.W.1
-
11
-
-
76549238253
-
The pleated sheet, a new layer configuration of polypeptide chains
-
Pauling, L. and Corey, R. B. (1951). The pleated sheet, a new layer configuration of polypeptide chains. Proc. Natl. Acad. Sci. USA 37 251-256.
-
(1951)
Proc. Natl. Acad. Sci. USA
, vol.37
, pp. 251-256
-
-
Pauling, L.1
Corey, R.B.2
-
12
-
-
0033056948
-
A protein taxonomy based on secondary structure
-
Przytycka, T., Aurora, R. and Rose, G. D. (1999). A protein taxonomy based on secondary structure. Nat. Struct. Biol. 6, 672-682.
-
(1999)
Nat. Struct. Biol
, vol.6
, pp. 672-682
-
-
Przytycka, T.1
Aurora, R.2
Rose, G.D.3
-
13
-
-
0035782925
-
Review: Protein secondary structure prediction continues to rise
-
Rost, B. (2001). Review: Protein secondary structure prediction continues to rise. J. Struct., Biol. 134, 204-218.
-
(2001)
J. Struct., Biol
, vol.134
, pp. 204-218
-
-
Rost, B.1
-
14
-
-
0003408420
-
-
MIT Press, Cambridge, MA
-
Schölkopf, B. and Smola, A. J. (2002). Learning with Kernels: Support Vector Machines, Regularization, Optimization, and Beyond. MIT Press, Cambridge, MA.
-
(2002)
Learning with Kernels: Support Vector Machines, Regularization, Optimization, and Beyond
-
-
Schölkopf, B.1
Smola, A.J.2
-
15
-
-
0141523251
-
β Edge strands in protein structure prediction and aggregation
-
Siepen, J. A., Radford, S. E. and Westhead, D. R. (2003). β Edge strands in protein structure prediction and aggregation. Protein Sci. 12, 2348-2359.
-
(2003)
Protein Sci
, vol.12
, pp. 2348-2359
-
-
Siepen, J.A.1
Radford, S.E.2
Westhead, D.R.3
-
16
-
-
33845366830
-
Support vector machines for prediction of dihedral angle regions
-
Zimmermann, O. and Hansmann, U. H. E. (2006). Support vector machines for prediction of dihedral angle regions. Bioinformatics 22, 3009-3015.
-
(2006)
Bioinformatics
, vol.22
, pp. 3009-3015
-
-
Zimmermann, O.1
Hansmann, U.H.E.2
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