-
1
-
-
0242317674
-
Molecular dynamics reveals the stabilizing role of loop closing residues in kissing interactions: Comparison between TAR-TAR*and TAR-aptamer
-
Beaurain F, Di Primo C, Toulme JJ, Laguerre M (2003) Molecular dynamics reveals the stabilizing role of loop closing residues in kissing interactions: comparison between TAR-TAR*and TAR-aptamer. Nucleic Acids Res 31:4275-4284
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4275-4284
-
-
Beaurain, F.1
Di Primo, C.2
Toulme, J.J.3
Laguerre, M.4
-
2
-
-
0027153328
-
Essential nucleotide sequences and secondary structure elements of the hairpin ribozyme
-
Berzal-Herranz A, Joseph S, Chowrira BM, Butcher SE, Burke JM (1993) Essential nucleotide sequences and secondary structure elements of the hairpin ribozyme. EMBO J 12:2567-2573
-
(1993)
EMBO J
, vol.12
, pp. 2567-2573
-
-
Berzal-Herranz, A.1
Joseph, S.2
Chowrira, B.M.3
Butcher, S.E.4
Burke, J.M.5
-
4
-
-
0029563614
-
Reconstitution of hairpin ribozyme activity following separation of functional domains
-
Butcher SE, Heckman JE, Burke JM (1995) Reconstitution of hairpin ribozyme activity following separation of functional domains. J Biol Chem 270:29648-29651
-
(1995)
J Biol Chem
, vol.270
, pp. 29648-29651
-
-
Butcher, S.E.1
Heckman, J.E.2
Burke, J.M.3
-
5
-
-
0031591383
-
The structure of an RNA "kissing" hairpin complex of the HIV TAR hairpin loop and its complement
-
Chang KY, Tinoco I Jr (1997) The structure of an RNA "kissing" hairpin complex of the HIV TAR hairpin loop and its complement. J Mol Biol 269:52-66
-
(1997)
J Mol Biol
, vol.269
, pp. 52-66
-
-
Chang, K.Y.1
Tinoco Jr., I.2
-
6
-
-
0015223584
-
Relaxation kinetics of dimer formation by self complementary oligonucleotides
-
Craig ME, Crothers DM, Doty P (1971) Relaxation kinetics of dimer formation by self complementary oligonucleotides. J Mol Biol 62:383-401
-
(1971)
J Mol Biol
, vol.62
, pp. 383-401
-
-
Craig, M.E.1
Crothers, D.M.2
Doty, P.3
-
7
-
-
0000218343
-
Synthesis and catalytic activity of adenine containing polyamines
-
Décout JL, Vergne J, Maurel MC (1995) Synthesis and catalytic activity of adenine containing polyamines. Macromol Chem Phys 196:2615-2624
-
(1995)
Macromol Chem Phys
, vol.196
, pp. 2615-2624
-
-
Décout, J.L.1
Vergne, J.2
Maurel, M.C.3
-
8
-
-
0027067096
-
On the origin of the transfer RNA molecule
-
Di Giulio M (1992) On the origin of the transfer RNA molecule. J Theor Biol 159:199-214
-
(1992)
J Theor Biol
, vol.159
, pp. 199-214
-
-
Di Giulio, M.1
-
9
-
-
0345276409
-
The origin of the tRNA molecule: Implications for the origin of protein synthesis
-
Di Giulio M (2004) The origin of the tRNA molecule: implications for the origin of protein synthesis. J Theor Biol 226:89-93
-
(2004)
J Theor Biol
, vol.226
, pp. 89-93
-
-
Di Giulio, M.1
-
10
-
-
0002258696
-
Specific volumes of biological macromolecules and some other molecules of biological interest
-
Springer New York
-
Durchschlag H (1986) Specific volumes of biological macromolecules and some other molecules of biological interest. In: Hinz HJ (ed) Thermodynamic data for biochemistry and biotechnology. Springer, New York, pp 45-128
-
(1986)
Thermodynamic Data for Biochemistry and Biotechnology
, pp. 45-128
-
-
Durchschlag, H.1
Hinz, H.J.2
-
12
-
-
0015235044
-
Complex formation between transfer RNA's with complementary anticodons
-
Eisinger J (1971) Complex formation between transfer RNA's with complementary anticodons. Biochem Biophys Res Commun 43:854-861
-
(1971)
Biochem Biophys Res Commun
, vol.43
, pp. 854-861
-
-
Eisinger, J.1
-
13
-
-
22244451704
-
A kissing-loop interaction in a hammerhead viroid RNA critical for its in vitro folding and in vivo viability.
-
Gago S, De la Pena M, Flores R (2005) A kissing-loop interaction in a hammerhead viroid RNA critical for its in vitro folding and in vivo viability. RNA 11:1073-1083
-
(2005)
RNA
, vol.11
, pp. 1073-1083
-
-
Gago, S.1
De La Pena, M.2
Flores, R.3
-
14
-
-
0035476689
-
Rapid formation of a solvent-inaccessible core in the Neurospora Varkud satellite ribozyme
-
Hiley SL, Collins RA (2001) Rapid formation of a solvent-inaccessible core in the Neurospora Varkud satellite ribozyme. EMBO J 20:5461-5469
-
(2001)
EMBO J
, vol.20
, pp. 5461-5469
-
-
Hiley, S.L.1
Collins, R.A.2
-
15
-
-
0018079265
-
Origin of the genetic code: A testable hypothesis based on tRNA structure, sequence, and kinetic proofreading
-
Hopfield JJ (1978) Origin of the genetic code: a testable hypothesis based on tRNA structure, sequence, and kinetic proofreading. Proc Natl Acad Sci USA 75:4334-4338
-
(1978)
Proc Natl Acad Sci USA
, vol.75
, pp. 4334-4338
-
-
Hopfield, J.J.1
-
16
-
-
0001339660
-
Neutron scattering in biology
-
Jacrot B (1976) Neutron scattering in biology. Rep Prog Phys 39:911-953
-
(1976)
Rep Prog Phys
, vol.39
, pp. 911-953
-
-
Jacrot, B.1
-
17
-
-
84985698663
-
Determination of molecular weight by neutron scattering
-
Jacrot B, Zaccai G (1981) Determination of molecular weight by neutron scattering. Biopolymers 20:2414-2426
-
(1981)
Biopolymers
, vol.20
, pp. 2414-2426
-
-
Jacrot, B.1
Zaccai, G.2
-
18
-
-
0035863772
-
TectoRNA: Modular assembly units for the construction of RNA nano-objects
-
Jaeger L, Westhof E, Leontis NB (2001) TectoRNA: modular assembly units for the construction of RNA nano-objects. Nucleic Acids Res 29:455-463
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 455-463
-
-
Jaeger, L.1
Westhof, E.2
Leontis, N.B.3
-
19
-
-
0014334825
-
Association of complementary oligoribonucleotides in aqueous solution
-
Jaskunas SR, Cantor CR, Tinoco I Jr (1968) Association of complementary oligoribonucleotides in aqueous solution. Biochemistry 7:3164-3178
-
(1968)
Biochemistry
, vol.7
, pp. 3164-3178
-
-
Jaskunas, S.R.1
Cantor, C.R.2
Tinoco Jr., I.3
-
20
-
-
0036237379
-
Rescue of an abasic hairpin ribozyme by cationic nucleobases: Evidence for a novel mechanism of RNA catalysis
-
Lebruska LL, Kuzmine II, Fedor MJ (2002) Rescue of an abasic hairpin ribozyme by cationic nucleobases: evidence for a novel mechanism of RNA catalysis. Chem Biol 9:465-473
-
(2002)
Chem Biol
, vol.9
, pp. 465-473
-
-
Lebruska, L.L.1
Kuzmine, I.I.2
Fedor, M.J.3
-
21
-
-
0033233440
-
The integrin alpha10 subunit: Expression pattern, partial gene structure, and chromosomal localization
-
Lehnert K, Ni J, Leung E, Gough S, Morris CM, Liu D, Wang SX, Langley R, Krissansen GW (1999) The integrin alpha10 subunit: expression pattern, partial gene structure, and chromosomal localization. Cytogenet Cell Genet 87:238-244
-
(1999)
Cytogenet Cell Genet
, vol.87
, pp. 238-244
-
-
Lehnert, K.1
Ni, J.2
Leung, E.3
Gough, S.4
Morris, C.M.5
Liu, D.6
Wang, S.X.7
Langley, R.8
Krissansen, G.W.9
-
22
-
-
0021102437
-
Structure of phenylalanine-accepting transfer ribonucleic acid and of its environment in aqueous solvents with different salts
-
Li ZQ, Giege R, Jacrot B, Oberthur R, Thierry JC, Zaccai G (1983) Structure of phenylalanine-accepting transfer ribonucleic acid and of its environment in aqueous solvents with different salts. Biochemistry 22:4380-4388
-
(1983)
Biochemistry
, vol.22
, pp. 4380-4388
-
-
Li, Z.Q.1
Giege, R.2
Jacrot, B.3
Oberthur, R.4
Thierry, J.C.5
Zaccai, G.6
-
23
-
-
38149091616
-
From ancient to modern RNA world: A metabolic story
-
Sharma (ed) Science Publishers, Enfield
-
Li YL, Tobé S, Chabauty A, Maurel MC (2006) From ancient to modern RNA world: a metabolic story. In: Sharma (ed) Plant genome: biodiversity and evolution, vol. 2. Science Publishers, Enfield, pp 1-38
-
(2006)
Plant Genome: Biodiversity and Evolution
, vol.2
, pp. 1-38
-
-
Li, Y.L.1
Tobé, S.2
Chabauty, A.3
Maurel, M.C.4
-
24
-
-
0842334528
-
Adenine riboswitches and gene activation by disruption of a transcription terminator
-
Mandal M, Breaker RR (2004) Adenine riboswitches and gene activation by disruption of a transcription terminator. Nat Struct Mol Biol 11:29-35
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 29-35
-
-
Mandal, M.1
Breaker, R.R.2
-
25
-
-
0033105176
-
Origins of life: Molecular foundations and new approaches
-
Maurel MC, Décout JL (1999) Origins of life: molecular foundations and new approaches. Tetrahedron 55:3141-3182
-
(1999)
Tetrahedron
, vol.55
, pp. 3141-3182
-
-
Maurel, M.C.1
Décout, J.L.2
-
26
-
-
0023340805
-
Catalysis by a prebiotic nucleotide analog of histidine
-
Maurel MC, Ninio J (1987) Catalysis by a prebiotic nucleotide analog of histidine. Biochimie 69:551-553
-
(1987)
Biochimie
, vol.69
, pp. 551-553
-
-
Maurel, M.C.1
Ninio, J.2
-
27
-
-
0037646509
-
In vitro selection of adenine-dependent hairpin ribozymes
-
Meli M, Vergne J, Maurel MC (2003) In vitro selection of adenine-dependent hairpin ribozymes. J Biol Chem 278:9835-9842
-
(2003)
J Biol Chem
, vol.278
, pp. 9835-9842
-
-
Meli, M.1
Vergne, J.2
Maurel, M.C.3
-
28
-
-
0031215134
-
An unusual pH-independent and metal-ion-independent mechanism for hairpin ribozyme catalysis
-
Nesbitt S, Hegg LA, Fedor MJ (1997) An unusual pH-independent and metal-ion-independent mechanism for hairpin ribozyme catalysis. Chem Biol 4:619-630
-
(1997)
Chem Biol
, vol.4
, pp. 619-630
-
-
Nesbitt, S.1
Hegg, L.A.2
Fedor, M.J.3
-
29
-
-
0022845689
-
RNA catalysis and the origins of life
-
Orgel LE (1986) RNA catalysis and the origins of life. J Theor Biol 123:127-149
-
(1986)
J Theor Biol
, vol.123
, pp. 127-149
-
-
Orgel, L.E.1
-
30
-
-
0004283981
-
-
chap 2. Glatter O, Kratky O (eds) Academic, London
-
Porod G (1982) Small Angle Scattering, chap 2. In: Glatter O, Kratky O (eds) Academic, London
-
(1982)
Small Angle Scattering
-
-
Porod, G.1
-
31
-
-
0017182937
-
Structural domains of transfer RNA molecules
-
Quigley GJ, Rich A (1976) Structural domains of transfer RNA molecules. Science 194:796-806
-
(1976)
Science
, vol.194
, pp. 796-806
-
-
Quigley, G.J.1
Rich, A.2
-
32
-
-
0029843088
-
The origin of kinetic cooperativity in prebiotic catalysts
-
Ricard J, Vergne J, Decout JL, Maurel MC (1996) The origin of kinetic cooperativity in prebiotic catalysts. J Mol Evol 43:315-325
-
(1996)
J Mol Evol
, vol.43
, pp. 315-325
-
-
Ricard, J.1
Vergne, J.2
Decout, J.L.3
Maurel, M.C.4
-
33
-
-
0034009520
-
Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling
-
Schuck P (2000) Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling. Biophys J 78:1606-1619
-
(2000)
Biophys J
, vol.78
, pp. 1606-1619
-
-
Schuck, P.1
-
34
-
-
35949003667
-
-
Cambridge University Press Cambridge
-
Serdyuk IN, Zaccai NR, Zaccai J (2007) Methods in molecular biophysics: structure, dynamics, function. Cambridge University Press, Cambridge
-
(2007)
Methods in Molecular Biophysics: Structure, Dynamics, Function
-
-
Serdyuk, I.N.1
Zaccai, N.R.2
Zaccai, J.3
-
35
-
-
10644250950
-
Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs
-
Serganov A, Yuan YR, Pikovskaya O, Polonskaia A, Malinina L, Phan AT, Hobartner C, Micura R, Breaker RR, Patel DJ (2004) Structural basis for discriminative regulation of gene expression by adenine- and guanine-sensing mRNAs. Chem Biol 11:1729-1741
-
(2004)
Chem Biol
, vol.11
, pp. 1729-1741
-
-
Serganov, A.1
Yuan, Y.R.2
Pikovskaya, O.3
Polonskaia, A.4
Malinina, L.5
Phan, A.T.6
Hobartner, C.7
Micura, R.8
Breaker, R.R.9
Patel, D.J.10
-
36
-
-
0026651086
-
Small catalytic RNAs
-
Symons RH (1992) Small catalytic RNAs. Annu Rev Biochem 61:641-671
-
(1992)
Annu Rev Biochem
, vol.61
, pp. 641-671
-
-
Symons, R.H.1
-
37
-
-
0025335881
-
Two autolytic processing reactions of a satellite RNA proceed with inversion of configuration
-
van Tol H, Buzayan JM, Feldstein PA, Eckstein F, Bruening G (1990) Two autolytic processing reactions of a satellite RNA proceed with inversion of configuration. Nucleic Acids Res 18:1971-1975
-
(1990)
Nucleic Acids Res
, vol.18
, pp. 1971-1975
-
-
Van Tol, H.1
Buzayan, J.M.2
Feldstein, P.A.3
Eckstein, F.4
Bruening, G.5
-
38
-
-
85041131924
-
Antisense RNA control in bacteria, phages, and plasmids
-
Wagner EG, Simons RW (1994) Antisense RNA control in bacteria, phages, and plasmids. Annu Rev Microbiol 48:713-742
-
(1994)
Annu Rev Microbiol
, vol.48
, pp. 713-742
-
-
Wagner, E.G.1
Simons, R.W.2
-
39
-
-
0024295002
-
Structure of phenylalanine-accepting transfer ribonucleic acid and of its environment in aqueous solvents with different salts
-
Zaccai G, Xian SY (1988) Structure of phenylalanine-accepting transfer ribonucleic acid and of its environment in aqueous solvents with different salts. Biochemistry 27:1316-1320
-
(1988)
Biochemistry
, vol.27
, pp. 1316-1320
-
-
Zaccai, G.1
Xian, S.Y.2
-
40
-
-
0002653367
-
Antisense RNA structure and function
-
Cold Spring Harbor Laboratory Press Cold Spring Harbor
-
Zeiler BN, Simons RW (1998) Antisense RNA structure and function. In: Simons RW, Grunberg-Manago M (eds) RNA structure and function, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, pp 437-464
-
(1998)
RNA Structure and Function
, pp. 437-464
-
-
Zeiler, B.N.1
Simons, R.W.2
Simons, R.W.3
Grunberg-Manago, M.4
|