메뉴 건너뛰기




Volumn 12, Issue 1, 2008, Pages 107-117

Gene cloning of cold-adapted isocitrate lyase from a psychrophilic bacterium, Colwellia psychrerythraea, and analysis of amino acid residues involved in cold adaptation of this enzyme

Author keywords

Cold adapted enzyme; Cold inducible gene expression; Colwellia psychrerythraea; Isocitrate lyase; Psychrophlic bacterium

Indexed keywords

ACETIC ACID DERIVATIVE; ISOCITRATE LYASE;

EID: 38049007048     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-007-0115-9     Document Type: Article
Times cited : (14)

References (29)
  • 3
    • 0031782955 scopus 로고    scopus 로고
    • Regulation of acetate metabolism by protein phosphorylation in Escherichia coli
    • Cozzone AJ (1998) Regulation of acetate metabolism by protein phosphorylation in Escherichia coli. Annu Rev Microbiol 52:127-164
    • (1998) Annu Rev Microbiol , vol.52 , pp. 127-164
    • Cozzone, A.J.1
  • 4
    • 0015385818 scopus 로고
    • Vibrio psychroerythrus sp. n.: Classification of the psychrophilic marine bacterium, NRC 1004
    • D'Aoust JY, Kushner DJ (1972) Vibrio psychroerythrus sp. n.: classification of the psychrophilic marine bacterium, NRC 1004. J Bacteriol 111:340-342
    • (1972) J Bacteriol , vol.111 , pp. 340-342
    • D'Aoust, J.Y.1    Kushner, D.J.2
  • 5
    • 85024726292 scopus 로고
    • Isolation of an obligately barophilic bacterium and description of a new genus, Colwellia gen. nov
    • Deming JW, Somers LK, Straube WL, Swartz DG, Macdonell MT (1988) Isolation of an obligately barophilic bacterium and description of a new genus, Colwellia gen. nov. Syst Appl Microbiol 10:152-160
    • (1988) Syst Appl Microbiol , vol.10 , pp. 152-160
    • Deming, J.W.1    Somers, L.K.2    Straube, W.L.3    Swartz, D.G.4    MacDonell, M.T.5
  • 6
    • 16544384962 scopus 로고    scopus 로고
    • Promoters from a cold-adapted bacterium: Definition of a consensus motif and molecular characterization of UP regulative elements
    • Duilio A, Madonna S, Tutino ML, Pirozzi M, Sannia G, Marino G (2004) Promoters from a cold-adapted bacterium: definition of a consensus motif and molecular characterization of UP regulative elements. Extremophiles 8:125-132
    • (2004) Extremophiles , vol.8 , pp. 125-132
    • Duilio, A.1    Madonna, S.2    Tutino, M.L.3    Pirozzi, M.4    Sannia, G.5    Marino, G.6
  • 7
    • 0032530086 scopus 로고    scopus 로고
    • Hot spots in cold adaptation: Localized increases in conformational flexibility in lactate dehydrogenase A4 orthologs of Antarctic notothenioid fishes
    • Fields PA, Somero GN (1998) Hot spots in cold adaptation: localized increases in conformational flexibility in lactate dehydrogenase A4 orthologs of Antarctic notothenioid fishes. Proc Natl Acad Sci USA 95:11476-11481
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 11476-11481
    • Fields, P.A.1    Somero, G.N.2
  • 8
    • 0141596172 scopus 로고    scopus 로고
    • Structural and functional adaptation to extreme temperatures in psychrophilic, mesophilic, and thermophilic DNA ligase
    • Geolette D, Damien B, Blaise V, Depiereux E, Uversky VN, Gerday C, Feller G (2003) Structural and functional adaptation to extreme temperatures in psychrophilic, mesophilic, and thermophilic DNA ligase. J Biol Chem 278:37015-37023
    • (2003) J Biol Chem , vol.278 , pp. 37015-37023
    • Geolette, D.1    Damien, B.2    Blaise, V.3    Depiereux, E.4    Uversky, V.N.5    Gerday, C.6    Feller, G.7
  • 10
    • 0027508357 scopus 로고
    • Gene encoding two isocitrate dehydrogenase isozymes of a psychrophilic bacterium, Vibrio sp. strain ABE-1
    • Ishii A, Suzuki M, Sahara T, Takada Y, Sasaki S, Fukunaga N (1993) Gene encoding two isocitrate dehydrogenase isozymes of a psychrophilic bacterium, Vibrio sp. strain ABE-1. J Bacteriol 175:6873-6890
    • (1993) J Bacteriol , vol.175 , pp. 6873-6890
    • Ishii, A.1    Suzuki, M.2    Sahara, T.3    Takada, Y.4    Sasaki, S.5    Fukunaga, N.6
  • 11
    • 0037162460 scopus 로고    scopus 로고
    • Trehalose synthesis is induced upon exposure of Escherichia coli to cold and is essential for vaiability at low temperatures
    • Kandror O, Deleon A, Goldberg AL (2002) Trehalose synthesis is induced upon exposure of Escherichia coli to cold and is essential for vaiability at low temperatures. Proc Natl Acad Sci USA 99:9727-9732
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 9727-9732
    • Kandror, O.1    Deleon, A.2    Goldberg, A.L.3
  • 12
    • 0031924072 scopus 로고    scopus 로고
    • Use of bacteriophage lambda recombination function to promote gene replacement in Escherichia coli
    • Kenan C (1998) Use of bacteriophage lambda recombination function to promote gene replacement in Escherichia coli. J Bacteriol 180:2063-2071
    • (1998) J Bacteriol , vol.180 , pp. 2063-2071
    • Kenan, C.1
  • 13
    • 0013894468 scopus 로고
    • The role and control of the glyoxylate cycle in Escherichia coli
    • Kornberg HL (1966) The role and control of the glyoxylate cycle in Escherichia coli. Biochem J 99:1-11
    • (1966) Biochem J , vol.99 , pp. 1-11
    • Kornberg, H.L.1
  • 14
    • 0000581636 scopus 로고
    • 2-units by a modified tricarboxilic acid cycle
    • 2-units by a modified tricarboxilic acid cycle. Nature 179:988-991
    • (1957) Nature , vol.179 , pp. 988-991
    • Kornberg, H.L.1    Krebs, H.A.2
  • 15
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 16
    • 0026677709 scopus 로고
    • Identification and characterization of novel low-temperature-inducible promoters of Escherichia coli
    • Qoronfleh MW, Debouck C, Keller J (1992) Identification and characterization of novel low-temperature-inducible promoters of Escherichia coli. J Bacteriol 174:7902-7909
    • (1992) J Bacteriol , vol.174 , pp. 7902-7909
    • Qoronfleh, M.W.1    Debouck, C.2    Keller, J.3
  • 17
    • 34347361558 scopus 로고    scopus 로고
    • Structure-dependent relationships between growth temperature of prokaryotes and the amino acid frequency in their proteins
    • Sælensminde G, Halskau Ø Jr, Helland R, Willassen NP, Jonassen I (2007) Structure-dependent relationships between growth temperature of prokaryotes and the amino acid frequency in their proteins. Extremophiles 11:585-596
    • (2007) Extremophiles , vol.11 , pp. 585-596
    • Sælensminde, G.1    Halskau Jr., Ø.2    Helland, R.3    Willassen, N.P.4    Jonassen, I.5
  • 18
    • 0032961383 scopus 로고    scopus 로고
    • Cis-Acting elements responsible for low-temperature-inducible expression of the gene coding the thermolabile isocitrate dehydrogenase isozyme of a psychrophilic bacterium, Vibrio sp. strain ABE-1
    • Sahara T, Suzuki S, Tsuruha J, Takada Y, Fukunaga N (1999) cis-Acting elements responsible for low-temperature-inducible expression of the gene coding the thermolabile isocitrate dehydrogenase isozyme of a psychrophilic bacterium, Vibrio sp. strain ABE-1. J Bacteriol 181:2602-2611
    • (1999) J Bacteriol , vol.181 , pp. 2602-2611
    • Sahara, T.1    Suzuki, S.2    Tsuruha, J.3    Takada, Y.4    Fukunaga, N.5
  • 20
    • 0016154301 scopus 로고
    • The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites
    • Shine J, Dalgano L (1974) The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. Proc Natl Acad Sci USA 71:1342-1346
    • (1974) Proc Natl Acad Sci USA , vol.71 , pp. 1342-1346
    • Shine, J.1    Dalgano, L.2
  • 23
    • 0026721058 scopus 로고
    • Identification of the promoter region of the Escherichia coli major cold shock gene, cspA
    • Tanabe H, Goldstein J, Yang M, Inouye M (1992) Identification of the promoter region of the Escherichia coli major cold shock gene, cspA. J Bacteriol 174:3867-3873
    • (1992) J Bacteriol , vol.174 , pp. 3867-3873
    • Tanabe, H.1    Goldstein, J.2    Yang, M.3    Inouye, M.4
  • 24
    • 0025217043 scopus 로고
    • Comparative structure, function and regulation of isocitrate lyase, an important assimilatory enzyme
    • Vanni P, Giachetti E, Pinzauti G, McFadden BA (1990) Comparative structure, function and regulation of isocitrate lyase, an important assimilatory enzyme. Comp Biochem Physiol 95B:431-458
    • (1990) Comp Biochem Physiol , vol.95 , pp. 431-458
    • Vanni, P.1    Giachetti, E.2    Pinzauti, G.3    McFadden, B.A.4
  • 25
    • 6444231402 scopus 로고    scopus 로고
    • Amino acid residues involved in cold adaptation of isocitrate lyase from a psychrophilic bacterium, Colwellia maris
    • Watanabe S, Takada Y (2004) Amino acid residues involved in cold adaptation of isocitrate lyase from a psychrophilic bacterium, Colwellia maris. Microbiology 150:3393-3403
    • (2004) Microbiology , vol.150 , pp. 3393-3403
    • Watanabe, S.1    Takada, Y.2
  • 26
    • 0035347113 scopus 로고    scopus 로고
    • Purification and characterization of a cold-adapted isocitrate lyase and a malate synthase from Colwellia maris, a psychrophilic bacterium
    • Watanabe S, Takada Y, Fukunaga N (2001) Purification and characterization of a cold-adapted isocitrate lyase and a malate synthase from Colwellia maris, a psychrophilic bacterium. Biosci Biotech Biochem 65:1095-1103
    • (2001) Biosci Biotech Biochem , vol.65 , pp. 1095-1103
    • Watanabe, S.1    Takada, Y.2    Fukunaga, N.3
  • 27
    • 0036667444 scopus 로고    scopus 로고
    • The cold-inducible icl gene encoding thermolabile isocitrate lyase of a psychrophilic bacterium, Colwellia maris
    • Watanabe S, Takada Y, Fukunaga N (2002a) The cold-inducible icl gene encoding thermolabile isocitrate lyase of a psychrophilic bacterium, Colwellia maris. Microbiology 148:2579-2589
    • (2002) Microbiology , vol.148 , pp. 2579-2589
    • Watanabe, S.1    Takada, Y.2    Fukunaga, N.3
  • 28
    • 0036781639 scopus 로고    scopus 로고
    • Purification and characterization of a cold-adapted isocitrate lyase and expression analysis of the cold-inducible isocitrate lyase gene from the psychrophilic bacterium Colwellia psychrerythraea
    • Watanabe S, Yamaoka N, Fukunaga N, Takada Y, (2002b) Purification and characterization of a cold-adapted isocitrate lyase and expression analysis of the cold-inducible isocitrate lyase gene from the psychrophilic bacterium Colwellia psychrerythraea. Extremophiles 6:397-405
    • (2002) Extremophiles , vol.6 , pp. 397-405
    • Watanabe, S.1    Yamaoka, N.2    Fukunaga, N.3    Takada, Y.4
  • 29
    • 0031783678 scopus 로고    scopus 로고
    • Assignment of Vibrio sp. strain ABE-1 to Colwellia maris sp. nov., a new psychrophilic bacterium
    • Yumoto I, Kawasaki K, Iwata H, Matsuyama H, Okuyama H (1998) Assignment of Vibrio sp. strain ABE-1 to Colwellia maris sp. nov., a new psychrophilic bacterium. Int J Syst Bacteriol 48:1357-1362
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 1357-1362
    • Yumoto, I.1    Kawasaki, K.2    Iwata, H.3    Matsuyama, H.4    Okuyama, H.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.