Distance, dissimilarity index, and network community structure

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 67, Issue 6 1, 2003, Pages

  Zhou, Haijun ^a  

^a MAX PLANCK INSTITUTE OF COLLOIDS AND INTERFACES   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; BROWNIAN MOVEMENT; MOLECULAR STRUCTURE; PARTICLES (PARTICULATE MATTER); PROTEINS; YEAST;

CHAROMYCES CEREVISIAE; DISSIMILARITY INDEX; NETWORK COMMUNITY STRUCTURE;

MOLECULAR DYNAMICS;

FUNGAL PROTEIN; PROTEIN BINDING;

ALGORITHM; ARTIFICIAL NEURAL NETWORK; BIOLOGICAL MODEL; BIOLOGY; BIOPHYSICS; CLUSTER ANALYSIS; COMPUTER PROGRAM; METABOLISM; PHYSIOLOGY; PROCEDURES; SACCHAROMYCES CEREVISIAE; STATISTICAL MODEL; YEAST;

ALGORITHMS; BIOPHYSICS; CLUSTER ANALYSIS; COMPUTATIONAL BIOLOGY; FUNGAL PROTEINS; MODELS, BIOLOGICAL; MODELS, STATISTICAL; NEURAL NETWORKS (COMPUTER); PROTEIN BINDING; SACCHAROMYCES CEREVISIAE; SOFTWARE; YEASTS;

EID: 37649029805     PISSN: 1063651X     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (14)

1. P. Uetz et al., Nature (London) 403, 623 (2000).
2. S. Wasserman and K. Faust, Social Network Analysis: Methods and Applications (Cambridge University Press, Cambridge, 1994).
3. E. Ravasz, A.L. Somera, D.A. Mongru, Z.N. Oltvai, and A.-L. Barabási, Science (Washington, DC, USA) 297, 1551 (2002).
4. M. Girvan and M.E.J. Newman, Proc. Natl. Acad. Sci. U.S.A. 99, 7821 (2002).
5. L.C. Freeman, Sociometry 40, 35 (1977).
6. H. Zhou, Phys. Rev. E 67, 041908 (2003).
7. G.W. Flake, S. Lawrence, and C.L. Giles, in Proceedings of the Sixth International Conference on Knowledge Discovery and Data Mining (ACM SIGKDD-2000), edited by R. Pamakrishnan and S. Stolfo (Association for Computing Machinery, New York, 2000), pp. 150-160.
8. http://www.mpikg-golm.mpg.de/th/people/zhou/NetworkCommunity.html
9. W.W. Zachary, J. Anthropol. Res. 33, 452 (1977).
10. I. Xenarios, L. Salwinski, X.J. Duan, P. Higney, S.M. Kim, and D. Eisenberg, Nucleic Acids Res. 30, 303 (2002).
11. C. M. Deane, L. Salwinski, I. Xenarios, and D. Eisenberg, Mol. Cell Proteonics 1, 349 (2002).
12. A. Bairoch and R. Apweiler, Nucleic Acids Res. 28, 45 (2000).
13. C. von Mering, R. Krause, B. Snel, M. Cornell, S.G. Oliver, S. Fields, and P. Bork, Nature (London) 417, 399 (2002).
14. H. W. Mewes, D. Frishman, U. Güldener, G. Mannhaupt, K. Mayer, M. Mokrejs, B. Morgenstern, M. Münsterkötter, S. Rudd, and B. Weil, Nucleic Acids Res. 30, 31 (2002).