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Volumn 88, Issue 4, 2008, Pages 877-890

Macromolecular sequence analysis using multiwindow Gabor representations

Author keywords

Correlation; Macromolecule sequence analysis; Minimisation of differences; Multiwindow Gabor representation

Indexed keywords

CORRELATION METHODS; DNA; INDEXING (OF INFORMATION); PROTEINS; QUERY LANGUAGES;

EID: 37649003222     PISSN: 01651684     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.sigpro.2007.10.011     Document Type: Article
Times cited : (8)

References (32)
  • 2
    • 85032750863 scopus 로고    scopus 로고
    • Genomic signal processing
    • Anastassiou D. Genomic signal processing. Signal Process. Mag. 18 4 (September 2000) 8-20
    • (2000) Signal Process. Mag. , vol.18 , Issue.4 , pp. 8-20
    • Anastassiou, D.1
  • 3
    • 0034491149 scopus 로고    scopus 로고
    • Frequency domain analysis of biomolecular sequences
    • Anastassiou D. Frequency domain analysis of biomolecular sequences. Bioinformatics 16 12 (December 2000) 1073-1081
    • (2000) Bioinformatics , vol.16 , Issue.12 , pp. 1073-1081
    • Anastassiou, D.1
  • 4
    • 1542333741 scopus 로고    scopus 로고
    • D. Susillo, A. Kundaje, D. Anastassiou, Spectrogram analysis of genomes, EURASIP J. Signal Process. (Special Issue on Genomic Signal Processing) (1) (2004) 29-42.
  • 5
    • 37649007217 scopus 로고    scopus 로고
    • C.W. Neville-Manning, I.H. Witten, Protein is incompressible, in: Proceedings of the Conference on Data Compression 1999 (DCC99), pp. 257-265.
  • 6
    • 0034084705 scopus 로고    scopus 로고
    • Wavelet change-point prediction of transmembrane proteins
    • Lio P., and Vanucci M. Wavelet change-point prediction of transmembrane proteins. Bioinformatics 16 (2000) 376-382
    • (2000) Bioinformatics , vol.16 , pp. 376-382
    • Lio, P.1    Vanucci, M.2
  • 7
    • 37649020568 scopus 로고    scopus 로고
    • D. Sussillo, Spectrofish, 〈http://www.ee.columbia.edu/~sussillo/spectrofish/〉.
  • 9
    • 0036290642 scopus 로고    scopus 로고
    • Wavelet transforms for the characterization and detection of repeating motifs
    • Murray K.B., Gorse D., and Thornton J.M. Wavelet transforms for the characterization and detection of repeating motifs. J. Mol. Biol. 316 (2002) 341-363
    • (2002) J. Mol. Biol. , vol.316 , pp. 341-363
    • Murray, K.B.1    Gorse, D.2    Thornton, J.M.3
  • 10
    • 0032971848 scopus 로고    scopus 로고
    • The hydrophobic cores of proteins predicted by wavelet analysis
    • Hirakawa H., Muta S., and Kuhara S. The hydrophobic cores of proteins predicted by wavelet analysis. Bioinformatics 4 (1999) 141-148
    • (1999) Bioinformatics , vol.4 , pp. 141-148
    • Hirakawa, H.1    Muta, S.2    Kuhara, S.3
  • 11
    • 0026398342 scopus 로고
    • Unsupervised texture segmentation using Gabor filters
    • Jain A.K., and Farrokhnia F. Unsupervised texture segmentation using Gabor filters. Pattern Recognition 24 12 (1991) 1167-1186
    • (1991) Pattern Recognition , vol.24 , Issue.12 , pp. 1167-1186
    • Jain, A.K.1    Farrokhnia, F.2
  • 12
    • 0030655455 scopus 로고    scopus 로고
    • D. Zhong, S.F. Chang, Video object model and segmentation for content-based video indexing, in: International Symposium for Circuits and Systems (ISCAS97), pp. 1492-1495.
  • 13
    • 0030648077 scopus 로고    scopus 로고
    • E. Scheirer, M. Slaney, Construction and evaluation of a robust multifeatures speech/music discriminator, in: Proceedings of International Conference on Acoustics, Speech and Signal Processing (ICASSP97), pp. 1331-1334.
  • 14
    • 0000861229 scopus 로고    scopus 로고
    • Analysis of multiwindow Gabor type schemes
    • Zibulski M., and Zeevi Y.Y. Analysis of multiwindow Gabor type schemes. Appl. Comput. Harmonic Anal. 4 2 (1997) 188-221
    • (1997) Appl. Comput. Harmonic Anal. , vol.4 , Issue.2 , pp. 188-221
    • Zibulski, M.1    Zeevi, Y.Y.2
  • 15
    • 0031167232 scopus 로고    scopus 로고
    • Discrete multiwindow Gabor type transforms
    • Zibulski M., and Zeevi Y.Y. Discrete multiwindow Gabor type transforms. IEEE Trans. Signal Process. 45 6 (June 1997) 1428-1442
    • (1997) IEEE Trans. Signal Process. , vol.45 , Issue.6 , pp. 1428-1442
    • Zibulski, M.1    Zeevi, Y.Y.2
  • 16
    • 27644476570 scopus 로고    scopus 로고
    • N.K. Subbanna, Y.C. Eldar, Efficient Gabor expansion using non-minimal dual Gabor windows, in: Proceedings of the International Conference on Electronics, Circuits, and Systems (ICECS), 2004.
  • 17
    • 37649000268 scopus 로고    scopus 로고
    • N.K. Subbanna, Y.C. Eldar, Y.Y. Zeevi, Oversampling of the generalized multiwindow Gabor scheme, in: International Workshop on Sampling Theory and Applications (SampTA), Samsun, Turkey, July 10-15, 2005.
  • 18
    • 37649005198 scopus 로고    scopus 로고
    • M. Dorfler, Gabor analysis for a class of functions called music, Ph.D. Dissertation, University of Vienna, 2003.
  • 19
    • 0029393448 scopus 로고
    • Discrete Gabor structures and optimal representations
    • Qiu S., and Feichtinger H. Discrete Gabor structures and optimal representations. IEEE Trans. Signal Process. 43 10 (October 1995) 2258-2268
    • (1995) IEEE Trans. Signal Process. , vol.43 , Issue.10 , pp. 2258-2268
    • Qiu, S.1    Feichtinger, H.2
  • 20
    • 0025482241 scopus 로고
    • The wavelet transform, time-frequency localization, and signal analysis
    • Daubechies I. The wavelet transform, time-frequency localization, and signal analysis. IEEE Trans. Inform. Theory 36 5 (September 1990) 961-1004
    • (1990) IEEE Trans. Inform. Theory , vol.36 , Issue.5 , pp. 961-1004
    • Daubechies, I.1
  • 21
    • 33746912013 scopus 로고    scopus 로고
    • Characterization of oblique dual frame pairs
    • Eldar Y.C., and Christensen O. Characterization of oblique dual frame pairs. J. Appl. Signal Process. 2006 ID 92674 (2006) 1-11
    • (2006) J. Appl. Signal Process. , vol.2006 , Issue.ID 92674 , pp. 1-11
    • Eldar, Y.C.1    Christensen, O.2
  • 23
    • 37649008149 scopus 로고    scopus 로고
    • P.P. Vaidyanathan, B.J. Yoon, The role of signal processing concepts in genomics and proteonomics, J. Franklin Inst. (Special Issue on Genomics) (2004) 1-27.
  • 24
    • 4644244328 scopus 로고    scopus 로고
    • E. Sejdic, J. Jiang, Comparative study of three time frequency representations with applications to a novel correlation method, in: International Conference on Acoustics, Speech, and Signal Processing (ICASSP), May 2004, pp. 633-636.
  • 25
    • 37649001034 scopus 로고    scopus 로고
    • T. Matsumoto, K. Sadakane, H. Imai, Biological Sequence Compression Algorithms, 1999.
  • 26
    • 0033544689 scopus 로고    scopus 로고
    • kPROT: a knowledge-based scale for the propensity of residue orientation in transmembrane segments, Application to membrane protein structure prediction
    • Pilpel Y., Ben-Tal N., and Lancet D. kPROT: a knowledge-based scale for the propensity of residue orientation in transmembrane segments, Application to membrane protein structure prediction. J. Mol. Biol. 294 (1999) 921-935
    • (1999) J. Mol. Biol. , vol.294 , pp. 921-935
    • Pilpel, Y.1    Ben-Tal, N.2    Lancet, D.3
  • 27
    • 0003742069 scopus 로고
    • Department of Biochemistry and Molecular Biology, University College London
    • Hubbard S.J., and Thornton J.M. Naccess Computer Program (1993), Department of Biochemistry and Molecular Biology, University College London
    • (1993) Naccess Computer Program
    • Hubbard, S.J.1    Thornton, J.M.2
  • 28
    • 0029967362 scopus 로고    scopus 로고
    • Information retrieval systems for molecular biology data banks
    • Ertzold T., Ulyanov A., and Argos P. Information retrieval systems for molecular biology data banks. Methods Enzymol. 266 (1996) 114-128
    • (1996) Methods Enzymol. , vol.266 , pp. 114-128
    • Ertzold, T.1    Ulyanov, A.2    Argos, P.3
  • 29
    • 0032900495 scopus 로고    scopus 로고
    • The variable and conserved interfaces of modeled olfactory receptor proteins
    • Pilpel Y., and Lancet D. The variable and conserved interfaces of modeled olfactory receptor proteins. Protein Sci. 8 (1999) 969-977
    • (1999) Protein Sci. , vol.8 , pp. 969-977
    • Pilpel, Y.1    Lancet, D.2
  • 30
    • 37649021035 scopus 로고    scopus 로고
    • www.dwb.unl.edu/Teacher/NSF/C08/C08Links/www.iacr.bbsrc.ac.uk/notebook/courses/guide/dnast.htm.
  • 31
    • 79960655760 scopus 로고    scopus 로고
    • The DNA sequence of human chromosome 22
    • Dunham I., Shimizu N., Roe B.A., and Chissoe S. The DNA sequence of human chromosome 22. Nature 402 (1999) 489-495
    • (1999) Nature , vol.402 , pp. 489-495
    • Dunham, I.1    Shimizu, N.2    Roe, B.A.3    Chissoe, S.4
  • 32
    • 0034619234 scopus 로고    scopus 로고
    • Fourier and wavelet transform analysis, a tool for visualizing regular patterns in DNA sequences
    • Dodin G., Vandergheynst P., Levoir P., Cordier C., and Marcourt L. Fourier and wavelet transform analysis, a tool for visualizing regular patterns in DNA sequences. J. Theoret. Biol. 206 (2000) 323-326
    • (2000) J. Theoret. Biol. , vol.206 , pp. 323-326
    • Dodin, G.1    Vandergheynst, P.2    Levoir, P.3    Cordier, C.4    Marcourt, L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.