A novel application of small-angle scattering techniques: Quality assurance testing of virus quantification technology

Radiation Physics and Chemistry

Volumn 77, Issue 3, 2008, Pages 215-224

  Kuzmanovic, Deborah A ^a   Elashvili, Ilya ^b   O'Connell, Catherine ^a   Krueger, Susan ^c  

^a NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY   (United States)

^b EDGEWOOD CHEMICAL BIOLOGICAL CENTER   (United States)

^c NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY   (United States)

Author keywords

Bacteriophage MS2; Charged reduced electrospray size spectrometry; Gas phase electrophoretic mobility macromolecular analysis; Small angle scattering; Virus concentration

Indexed keywords

BACTERIOPHAGES; ELECTROPHORESIS; NEUTRON SCATTERING; QUALITY ASSURANCE;

CHARGED REDUCED ELECTROSPRAY SIZE SPECTROMETRY; GAS PHASE ELECTROPHORETIC MOBILITY MACROMOLECULAR ANALYSIS; SMALL ANGLE SCATTERING; VIRUS CONCENTRATION;

X RAY SCATTERING;

ACCURACY; ARTICLE; NEUTRON SCATTERING; QUALITY CONTROL; RADIATION SCATTERING; SMALL ANGLE SCATTERING; VIRUS CHARACTERIZATION; X RAY CRYSTALLOGRAPHY;

EID: 37349017256     PISSN: 0969806X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.radphyschem.2007.10.004     Document Type: Article

References (39)

1. Bacher G., Szymanski W.W., Kaufman S.L., et al. Charge-reduced nano electrospray ionization combined with differential mobility analysis of peptides, proteins, glycoproteins, noncovalent protein complexes and viruses. J. Mass Spectrom. 36 9 (2001) 1038-1052
2. Crowther R.A. Viruses and the development of quantitative biological electron microscopy. IUBMB Life 56 (2004) 239-248
3. Curry A., Appleton H., and Dowsett B. Application of transmission electron microscopy to the clinical study of viral and bacterial infections: present and future. Micron 37 (2006) 91-106
4. Davis J.E., and Sinsheimer R.L. The replication of bacteriophage MS2. J. Mol. Biol. 6 (1963) 203-207
5. Duke, S.D., Layendecker, E.B., 2003. Internal standard method for size calibration of sub-micrometer spherical particles by electron microscope. TechNote-010B.
6. Eisenberg D. Physical Chemistry with Applications to the Life Sciences (1979), Benjamin/Cummings, Menlo Park, CA
7. Fedorko D.P., and Hijazi Y.M. Application of molecular techniques to the diagnosis of microsporidial infection. Emerging Infect. Dis. 2 (1996) 183-191
8. Golmohammadi R., Valegard K., Fridborg K., and Liljas L. Refined structure of bacteriophage MS2 at 2.8 Å resolution. J. Mol. Biol. 234 (1993) 620-639
9. Guinier A. La diffraction des rayons X aux tre petit angles: application a l'etude de phenomenes ultramicroscopique. Ann. Phys. 12 (1939) 161
10. Guinier A., and Fournet G. Small-Angle Scattering of X-Rays (1955), Wiley, New York
11. Hayter J.B. Physics of amphiphiles-micelles, vesicles, and microemulsions. In: DeGiorgio V., and Corti M. (Eds). Proceedings of the International School of Physics "Enrico Fermi", Course XC (1983), North-Holland, Elsevier, Amsterdam 59-93
12. Hogan C.J.J., Kettleson E.R., Lee M., Ramaswami B., Angenet L.T., and Biswas P. Sampling methodologies and dosage assessment techniques for submicrometre and ultrafine virus aerosol particles. J. Appl. Microbiol. 99 (2005) 1422-1434
13. Hogan C.J.J., Kettleson E.R., Ramaswami B., Chen D., and Biswas P. Charge reduced electrospray size spectrometry of mega- and gigadalton complexes: whole viruses and fragments. Anal. Chem. 78 (2006)
14. Interfacial, D.C., 2001. NIST calibrated standard/sulfate white polystyrene latex certificate of analysis. Product number: 0-40, batch number: C-100-1.
15. Jacrot B., and Zaccai G. Determination of molecular weight by neutron scattering. Biopolymers 20 (1981) 2413
16. Kaufman S.L., Kuchumov A.R., Kazakevich M., and Vinogradov S.N. Analysis of a 3.6-MDa hexagonal bilayer hemoglobin from Lumbricus terrestris using gas-phase electrophoretic mobility analyzer. Anal. Chem. 259 (1998) 195-202
17. Koch M.H.J., Vachette P., and Svergun D.I. Small-angle scattering: a view on the properties, structures and structural changes of biological macromolecules in solution. Q. Rev. Biophys. 36 (2003) 147-227
18. Krueger S. SANS provides unique information on the structure and function of biological macromolecules in solution. Physica B 241 (1998) 1131-1137
19. Ksiazek T.G., Erdman D., Goldsmith C.S., et al. A novel coronavirus associated with severe acute respiratory syndrome. N. Engl. J. Med. 348 (2003) 1953-1966
20. Kuzmanovic D.A., Elashivili I., Wick C.H., O'Connell C., and Krueger S. Bacteriophage MS2: molecular weight and spatial distribution of the protein and RNA components by small-angle neutron scattering and virus counting. Structure 11 (2003) 1339-1348
21. Kuzmanovic D.A., Elashivili I., Wick C.H., O'Connell C., and Krueger S. Quantification of RNA in bacteriophage MS2-like viruses in solution by small angle X-ray scattering. Radiat. Phys. Chem. 75 (2006) 359-368
22. Letteri, T.R., Hembree, G., 1988. Certification of NBS SRM 1691: .3 μm-diameter polystryene spheres. National Bureau of Standards NBSIR 88-3730.
23. Mazzone H. CRC Handbook of Viruses: Mass-Molecular Weight Values and Related Properties (1998), CRC Press LLC, Boca Raton, FL
24. Moller W.J. Determination of diffusion coefficients and molecular weights of ribonucleic acids and viruses. Proc. Natl. Acad. Sci. USA 51 (1964) 501-505
25. Mulholland G.W., and Bauer B. Nanometer calibration particles: what is available and what is needed?. J. Nanopart. Res. 2 (2000) 5-15
26. Overby L.R., Barlow G.H., Doi R.H., Jacob M., and Spiegelman S. Comparison of two serologically distinct ribonucleic acid bacteriophages. J. Bacteriol. 91 (1966) 442-447
27. Pasloske B.L., Walkerpeach C.R., Obermoeller R.D., Winkler M., and DuBois D.B. Armored RNA technology for production of ribonuclease-resistant viral RNA controls and standards. J. Clin. Microbiol. 36 (1998) 3590-3594
28. Sambrook J., and Russell D.W. Molecular Cloning a Laboratory Manual (2001), Cold Spring Harbor Press, Cold Spring Harbor, NY pp. 2.38-32.39, 32.44, 32.48-32.51
29. Semenyuk A.V., and Svergun D.I. GNOM-a program package for small-angle scattering data processing. J. Appl. Crystrallogr. 24 (1991) 537-545
30. Smith H., Hutchison C.R., Pfannkock C., and Venter J. Generating a synthetic genome by whole genome assembly: phiX174 bacteriophage from synthetic oligonucleotides. Proc. Natl. Acad. Sci. USA 100 (2003) 15440-15445
31. Strauss J.H., and Sinsheimer R.L. Purification and properties of bacteriophage MS2 and of its ribonucleic acid. J. Mol. Biol. 7 (1963) 43-54
32. Sugiyama T., Hebert R.R., and Hartman K.A. Ribonucleoprotein complexes formed between bacteriophage MS2 RNA and MS2 protein in vitro. J. Mol. Biol. 25 (1967) 455-463
33. Wick, C.H., 2002a. Method and apparatus for counting submicron sized particles. US patent 6,485,686, USA.
34. Wick, C.H., 2002b. Method and system for detecting and recording submicron sized particles. US patent 6,491,872, USA.
35. Wick, C.H., Anderson, D.M., 2000. System and method for detection, identification and monitoring of sub-micron-sized particles. USA as represented by the Secretary of the Army (Washington, DC) patent number 6,051,189, USA.
36. Wick C.H., and McCubbin P.E. Characterization of purified MS2 bacteriophage by the physical counting methodology used in the integrated virus detection system (IVDS). Toxicol. Methods 9 (1999) 245-252
37. Wick C.H., and McCubbin P.E. Passage of MS2 bacteriophage through various molecular weight filters. Toxicol. Methods 9 (1999) 265-273
38. Wick C.H., and McCubbin P.E. Purification of MS2 bacteriophage from complex growth media and resulting analysis by the integrated virus detection system (IVDS). Toxicol. Methods 9 (1999) 253-263
39. Zheng Y.Z., Webb R., Greenfield P.F., and Reid S. Improved method for counting virus and virus like particles. J. Virol. Methods 62 (1996) 153-159