Diversification rates increase with population size and resource concentration in an unstructured habitat

Genetics

Volumn 177, Issue 4, 2007, Pages 2243-2250

  Stevens, M H H ^a   Sanchez, M ^a,b   Lee, J ^a   Finke, S E ^c  

^a MIAMI UNIVERSITY   (United States)

^b UNIVERSITY OF PUERTO RICO   (Puerto Rico)

^c UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BIODIVERSITY; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; ESCHERICHIA COLI; GENETIC MANIPULATION; GENETIC VARIABILITY; HABITAT STRUCTURE; HETEROZYGOSITY; MICROBIAL POPULATION DYNAMICS; NONHUMAN; POPULATION SIZE; PRIORITY JOURNAL; SPECIES HABITAT;

BIODIVERSITY; ECOSYSTEM; ESCHERICHIA COLI; HETEROZYGOTE; POPULATION DENSITY; POPULATION DYNAMICS;

ESCHERICHIA COLI;

EID: 37249072750     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.107.076869     Document Type: Article

References (47)

1. ABRAMS, P. A., 1995 Monotonic or unimodal diversity-productivity gradients: What does competition theory predict? Ecology 76: 2019-2027.
2. ACKERMANN, M., and M. DOEBELI, 2004 Evolution of niche width and adaptive diversification. Evolution 58: 2599-2612.
3. ATWOOD, K. C., L. K. SCHNEIDER and F. J. RYAN, 1951 Periodic selection in Escherichia coli. Proc. Natl. Acad. Sci. USA 37: 146-155.
4. BAZIN, E., S. GLEMIN and N. GALTIER, 2006 Population size does not influence mitochondrial genetic diversity in animals. Science 312: 570-572.
5. BOHANNON, D. E., N. CONNELL, J. KEENER, A. TORMO, M. ESPINOSA-URGEL et al., 1991 Stationary-phase-inducible "gearbox" promoters: differential effects of katF mutations and role of sigma 70. J. Bacteriol. 173: 4482-4492.
6. CROW, J. F., and M. KIMURA, 1970 An Introduction to Population Genetics Theory. Harper & Row, New York.
7. DE VISSER, J. A. G. M., and D. E. ROZEN, 2005 Limits to adapation in asexual populations. J. Evol. Biol. 18: 779-788.
8. DIECKMANN, U., and M. DOEBELI, 1999 On the origin of species by sympatric speciation. Nature 400: 354-357.
9. DOEBELI, M., U. DIECKMANN, J. A. J. METZ and D. TAUTZ, 2005 What we have also learned: adaptive speciation is theoretically plausible. Evolution 59: 691-695.
10. EMERSON, B. C., and N. KOLM, 2005 Species diversity can drive speciation. Nature 434: 1015-1017.
11. FARRELL, M. J., and S. E. FINKEL, 2003 The growth advantage in stationary-phase phenotype conferred by rpoS mutation is dependent on the pH and nutrient environment. J. Bacteriol. 185: 7044-7052.
12. FINKEL, S. E., 2006 Long-term survival during stationary phase: evolution and the GASP phenotype. Nat. Rev. Microbiol. 4: 113-120.
13. FINKEL, S. E., and R. KOLTER, 1999 Evolution of microbial diversity during prolonged starvation. Proc. Natl. Acad. Sci. USA 96: 4023-4027.
14. FINKEL, S. E., E. R. ZINSER and R. KOLTER, 2000 Long-term survival and evolution in the stationary phase, pp. 231-238 in Bacterial Stress Responses, edited by G. STORZ and R. HENGGE-ARONIS. ASM, Washington, DC.
15. FINKEL, T., 2003 Oxidant signals and oxidative stress. Curr. Opin. Cell Biol. 15: 247-254.
16. GERRISH, P. J., and R. E. LENSKI, 1998 The fate of competing beneficialmutations in an asexual population. Genetica 103: 127-144.
17. GILLESPIE, J. H., 2001 Is the population size of a species relevant to its evolution? Evolution 55: 2161-2169.
18. HEDRICK, P. W., 1986 Genetic polymorphism in heterogeneous envrionments: a decade later. Annu Review of Ecology and Systematics 17: 535-566.
19. HEDRICK, P. W., M. E. GINEVAN and E. P. EWING, 1976 Genetic polyorphism in a heterogeneous environment. Annu. Rev. Ecol. Syst. 7: 1-32.
20. HENGGE-ARONIS, R., 2000 The general stress response in Escherichia coli, pp. 161-178 in Bacterial Stress Responses, edited by G. STORZ and R. HENGGE-ARONIS. ASM, Washington, DC.
21. HILL, W. G., and A. ROBERTSON, 1966 The effect of linkage on limits to artificial selection. Genet. Res. 8: 269-294.
22. HILLEBRAND, H., 2004 On the generality of the latitudinal diversity gradient. Am. Nat. 163: 192-211.
23. JABLONSKI, D., K. ROY and J. W. VALENTINE, 2006 Out of the tropics: evolutionary dynamics of the latitudinal gradient. Science 314: 102-106.
24. KASSEN, R., A. BUCKLING, G. BELL and P. B. RAINEY, 2000 Diversity peaks at intermediate productivity in a laboratory microcosm. Nature 406: 508-512.
25. MACARTHUR, R., and E. PIANKA, 1966 On optimal use of a patchy environment. Am. Nat. 100: 603-609.
26. MITTELBACH, G. G., C. F. STEINER, S. M. SCHEINER, K. L. GROSS, H. L. REYNOLDS et al., 2001 What is the observed relationship between species richness and productivity? Ecology 82: 2381-2396.
27. NEI, M., 1987 Molecular Evolutionary Genetics. Columbia University Press, New York.
28. NEMOTO, S., and T. FINKEL, 2004 Aging and the mystery at Arles. Nature 429: 149-152.
29. NOTLEY-MCROBB, L., T. KING and T. FERENCI, 2002 rpoS mutations and loss of general stress resistance in Escherichia coli populations as a consequence of conflict between competing stress types. J. Bacteriol. 184: 806-811.
30. PENNISI, E., 2005 What determines species diversity? Science 309: 90.
31. PINHEIRO, J., and D. BATES, 2000 Mixed-Effects Models in S and S-PLUS. Springer, New York.
32. R DEVELOPMENT CORE TEAM, 2007 R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna.
33. RANGEL, T. F. L. V. B., and J. A. F. DINIZ-F ILHO, 2005 Neutral community dynamics, the mid-domain effect and spatial patterns in species richness. Ecol. Lett. 8: 783-790.
34. ROSENZWEIG, M. L., 1992 Species diversity gradients: we know more and less than we thought. J. Mammal. 73: 715-730.
35. SIMPSON, E. H., 1949 Measurement of diversity. Nature 163: 688.
36. STEVENS, M. H. H., and W. P. CARSON, 1999 The significance of assemblage level thinning for species richness. J. Ecol. 87: 490-502.
37. STEVENS, M. H. H., O. L. PETCHEY and P. E. SMOUSE, 2003 Stochastic relations between species richness and the variability of species composition. Oikos 103: 479-488.
38. SUDING, K. N., S. L. COLLINS, L. GOUGH, C. CLARK, E. E. CLELAND et al., 2005 Functional- and abundance-based mechanisms explain diversity loss due to n fertilization. Proc. Natl. Acad. Sci. USA 102: 4387-4392.
39. TENAILLON, O., B. TOUPANCE, H. LE NAGARD, F. TADDEI and B. GODELLE, 1999 Mutators, population size, adaptive landscape and the adaptation of asexual populations of bacteria. Genetics 152: 485-493.
40. TILMAN, D., 1982 Resource Competition and Community Structure (Monographs in Population Biology). Princeton University Press, Princeton, NJ.
41. VANDERMEULEN, M., A. HUDSON and S. M. SCHEINER, 2001 Three evolutionary hypotheses for the hump-shaped productivity-diversity curve. Evol. Ecol. Res. 3: 379-392.
42. WAIDE, R. B., M. R. WILLIG, C. F. STEINER, G. MITTELBACH, L. GOUGH et al., 1999 The relationship between productivity and species richness. Annu. Rev. Ecol. Syst. 30: 257-300.
43. WILLIG, M. R., D. M. KAUFMAN and R. D. STEVENS, 2003 Latitudinal gradients of biodiversity: pattern, process, scale, and synthesis. Annu. Rev. Ecol. Syst. 34: 273-309.
44. YEISER, B., E. D. PEPPER, M. F. GOODMAN and S. E. FINKEL, 2002 SOS-induced DNA polymerases enhance long-term survival and evolutionary fitness. Proc. Natl. Acad. Sci. USA 99: 8737-8741.
45. ZAMBRANO, M. M., and R. KOLTER, 1993 Escherichia coli mutants lacking Nadh Dehydrogenase-I have a competitive disadvantage in stationary phase. J. Bacteriol. 175: 5642-5647.
46. ZAMBRANO, M. M., and R. KOLTER, 1996 GASPing for life in stationary phase. Cell 86: 181-184.
47. ZAMBRANO, M. M., D. A. SIEGELE, M. ALMIRON, A. TORMO and R. Kolter, 1993 Microbial competition - Escherichia coli mutants that take over stationary phase cultures. Science 259: 1757-1760.