Characterization of Tunisian pomegranate (Punica granatum L.) cultivars using amplified fragment length polymorphism analysis

Scientia Horticulturae

Volumn 115, Issue 3, 2008, Pages 231-237

  Jbir, Rania ^a,b   Hasnaoui, Néjib ^a,b   Mars, Messaoud ^b   Marrakchi, Mohamed ^a   Trifi, Mokhtar ^a  

^a FACULTÉ DES SCIENCES DE TUNIS   (Tunisia)

^b UR Agro biodiversity   (Tunisia)

Author keywords

AFLP; Cultivars; Pomegranate; Punica granatum L.; Tunisia

Indexed keywords

CULTIVAR; DECIDUOUS TREE; DNA; FRUIT; GENETIC ANALYSIS; GENETIC VARIATION; GERMPLASM; MOLECULAR ANALYSIS;

AFRICA; NORTH AFRICA; TUNISIA;

LYTHRACEAE; PUNICA GRANATUM;

EID: 37249047524     PISSN: 03044238     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.scienta.2007.09.002     Document Type: Article

References (38)

1. Bassam B.J., Caetano Anolles G., and Gresshoff P.M. Fast and sensitive silver staining of DNA in polyacrylamide gel. Anal. Biochem. 196 (1991) 80-83
2. Ben Nasr C., Ayed N., and Metche M. Quantitative determination of the polyphenolic content of pomegranate peel. Z. Lebensm. Unters. Forsh. 203 4 (1996) 374-378
3. Cabrita L.F., Aksoy U., Hepaksoy S., and Leitao J.M. Suitability of isozyme, RAPD and AFLP markers to assess genetic differences and relatedness among fig (Ficus carica L.) clones. Sci. Hortic. 87 4 (2001) 261-273
4. Chalhoub B.A., Thibault S., Laucou V., Rameau C., Hofte H., and Cousin R. Silver staining and recovery of AFLP TM amplification products on large denaturing polyacrylamide gels. Biotechniques 22 2 (1997) 216-220
5. Dellaporta S.L., Wood J., and Hicks J.B. Maize DNA miniprep. In: Cold Spring Harbor Laboratory (Ed). Molecular Biology of Plants (1984), Cold Spring Harbor Press pp. 36-38
6. El-Assar A., Krueger R.R., Devanand P.S., and Chao C.T. Genetic analysis of Egyptian date Phoenix dactylifera L. accessions using AFLP markers. Genet. Resour. Crop. Evol. 52 (2005) 601-607
7. Evreinoff V.A. Le grenadier. Fruit d'Outre-Mer 4 5 (1949) 161-170
8. Felsenstein J. PHYLIP (Phylogeny Interference Package) version 3,5 c (1995), Department of Genetics, University of Washington, Seattle, Washington
9. Gilbert J.E., Lewis R.V., Wilkinson M.J., and Galigari P.D.S. Developing and appropriate strategy to assess genetic variability in plant germplasm collections. Theor. Appl. Genet. 98 (1999) 1125-1131
10. Guarino L., Miller T., Baazara M., and Obadi N. Socotra: the island of Bliss revisited. Diversity 6 3/4 (1990) 28-31
11. Hill M., Witsenboer H., Zebau M., and Vos P. PCR-based fingerprinting AFLPs as a tool for studying genetic relationships in Lactuca spp. Theor. Appl. Genet. 93 (1996) 1202-1210
12. Levin G.M. Pomegrante (Punica granatum) plant genetic resources in Turkmenistan. Plant. Genet. Resour. Newsl. 97 (1994) 31-36
13. Levin G.M. Aspects of pomegranate culture in Turkmenistan. Plant. Genet. Resour. Newsl. 102 (1995) 29-31
14. Mackill D.J. Genome analysis and rice breeding. In: Shimamoto K. (Ed). Molecular biology of Rice (1999) pp. 17-41
15. Marghali S., Panaud O., Lamy F., Ghariani S., Sarr A., Marrakchi M., and Trifi Farah N. Exploration of intra- and inter-population genetic diversity in Hedysarum coronarium L. by AFLP markers. Genet. Resour. Crop. Evol. 52 (2005) 277-284
16. Mars M. Pomegranate genetic resources in the Mediterranean region. First MESFIN Plant Genetic Resource Meeting. Tenerife, Spain, October 2-5, 1995 (1996) 345-354
17. Mars, M., 2001. Ressources génétiques du grenadier (Punica granatum L.) en Tunisie: prospection, conservation et analyse de la diversité. Thèse de Doctorat es Sciences Naturelles. Faculté des Sciences de Tunis, Université El Manar Tunis, Tunisie.
18. Mars M., and Marrakchi M. Conservation et valorisation des ressources génétiques du grenadier (Punica granatum L.) en Tunisie. Plant. Genet. Resour. Newsl. 114 (1998) 35-39
19. Mars M., and Marrakchi M. Diversity among pomegranate (Punica granatum L.) germplasm in Tunisia. Genet. Res. Crop. Evol. 46 (1999) 461-467
20. Mars M., and Marrakchi e.M. Dynamique de floraison et régime de reproduction chez le grenadier (Punica granatum L.) en Tunisie. Fruits 59 (2004) 39-48
21. Mars M., and Sayadi S. Etude comparative de la qualité des fruits de cinq variétés de grenadier (Punica granatum L). Rev. Rég. Arides 4 92 (1992) 45-57
22. Maughan P.J., Saghai Maroof M.A., and Buss G.R. Amplified fragment length polymorphism (AFLP) in soybean: species diversity, inheritance, and near-isogenic line analysis. Theor. Appl. Genet. 93 (1996) 392-401
23. Melgarejo Moreno P., and Martínez Valero R. El Granado (1992), Mundi Prensa, Madrid, Spain
24. Moriguchi T., Omura M., Natsuta N., and Kozaki I. In vitro adventitious shoot formation from anthers of pomegranate. Hortic. Sci. 22 5 (1987) 947-948
25. Nei M., and Li W.H. Mathematical models for studying genetic variation in terms of restriction endonucléases. Proc. Natl. Acad. Sci. U.S.A. 76 (1979) 5269-5273
26. Ozguven A.I. The genetic resources of pomegranate (Punica granatum) in Turkey. First MESFIN Plant Genetic Resource Meeting. Tenerife, Spain, October 2-5, 1995 (1996) 269-284
27. Page R.D.M. TREEVIEW: an application to display phylogenetic trees on personal computers. Comp. Appl. Biosci. 12 (1996) 357-358
28. Panaud O., Chaib A., and Sarr A. Dynamic conservation of apricot Prunus americana in saharian oases: use of AFLP markers to assess diversity in traditional orchards. Euphytica 128 (2002) 301-305
29. Prevost A., and Wilkinson M.J. A new system of comparing PCR primers applied to ISSR fingerprinting of potato cultivars. Theor. Appl. Genet. 98 (1999) 107-112
30. Roldan-Ruiz I., Dendauw J., Van Bockstaele E., Depicker A., and De Loose M. AFLP markers reveal high polymorphic rates in ryegrasses (Lolium spp.). Mol. Breed. 6 (2000) 125-134
31. Sambrook J., Fritsch E.F., and Maniatis T. Molecular Cloning: A Laboratory Manual (1989), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, USA
32. Sarkhosh A., Zamani Z., Fatahi R., and Ebadi A. RAPD markers reveal polymorphism among some Iranian pomegranate (Punica granatum L.) genotypes. Sci. Hortic. 111 (2006) 24-29
33. Schut J.W., Qi X., and Stam P. Association between relationship measures based on AFLP markers, pedigree data and morphological traits in barley. Theor. Appl. Genet. 95 (1997) 1161-1168
34. Sharma S.K., Knox M.R., and Ellis T.H.N. AFLP analysis of the diversity and phylogeny of lens and its comparison with RAPD analysis. Theor. Appl. Genet. 93 (1996) 751-758
35. Talebi Baddaf M., Sharifi Neia B., and Bahar M. Analysis of genetic diversity in pomegranate cultivars of Iran, using random amplified polymorphic DNA (RAPD) markers. Proceedings of the Third National Congress of Biotechnology, vol. 2. Iran (2003) 343-345
36. Virk P.S., Newbury H.J., and Jackson M.T. Are mapped markers more useful for assessing genetic diversity?. Theor. Appl. Genet. 100 (2000) 607-613
37. Vos P., Hoger R., Bleeker M., Rejans M., Vandelee T., Hornes M., Frijters A., Pot J., Peleman J., Kuiper M., and Zabeau M. AFLP: a new technique for DNA fingerprinting. Nucleic Acids. Res. 23 (1995) 4407-4417
38. Zukovskij P.M. Punica. Cultivated plants and their wild relatives (1950), State Publishing House Soviet Science, Moscow 60-61