Molecular epidemiology and disease severity of respiratory syncytial virus in relation to other potential pathogens in children hospitalized with acute respiratory infection in Jordan

Journal of Medical Virology

Volumn 80, Issue 1, 2008, Pages 168-174

  Kaplan, Nasser M ^a,b   Dove, Winifred ^b,c   Abd Eldayem, Sawsan A ^a   Abu Zeid, Ahmad F ^a   Shamoon, Hiyam E ^a   Hart, C Anthony ^b  

^a KING HUSSEIN MEDICAL CENTER   (Jordan)

^b UNIVERSITY OF LIVERPOOL   (United Kingdom)

^c Duncan Building ^*  (United Kingdom)

Author keywords

Acute respiratory infections; Children; Disease severity; Jordan; Molecular epidemiology; Respiratory syncytial virus

Indexed keywords

ADENOVIRUS; ARTICLE; ASPIRATION; BOCAVIRUS; CHILD HOSPITALIZATION; CHLAMYDIA; CONTROLLED STUDY; CORONAVIRUS; DISEASE SEVERITY; FEMALE; GENETIC VARIABILITY; HUMAN; HUMAN TISSUE; INFANT; INFLUENZA VIRUS A; INFLUENZA VIRUS B; JORDAN; MAJOR CLINICAL STUDY; MALE; METAPNEUMOVIRUS; MYCOPLASMA PNEUMONIA; NASOPHARYNX; PARAINFLUENZA VIRUS 1; PARAINFLUENZA VIRUS 2; PARAINFLUENZA VIRUS 3; PARAINFLUENZA VIRUS 4; PATHOGENESIS; PRESCHOOL CHILD; RESPIRATORY SYNCYTIAL PNEUMOVIRUS; RESPIRATORY TRACT INFECTION; RHINOVIRUS; RNA VIRUS INFECTION; SINGLE NUCLEOTIDE POLYMORPHISM; STATISTICAL SIGNIFICANCE; VIRUS DETECTION; VIRUS STRAIN;

CHILD, PRESCHOOL; CROSS-SECTIONAL STUDIES; EPIDEMIOLOGY, MOLECULAR; HOSPITALIZATION; HUMANS; INFANT; INFANT, NEWBORN; JORDAN; NASOPHARYNX; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; PROSPECTIVE STUDIES; RESPIRATORY SYNCYTIAL VIRUS INFECTIONS; RESPIRATORY SYNCYTIAL VIRUS, HUMAN; RESPIRATORY TRACT INFECTIONS;

ADENOVIRIDAE; CHLAMYDIA; CORONAVIRUS; HUMAN BOCAVIRUS; HUMAN METAPNEUMOVIRUS; HUMAN RESPIRATORY SYNCYTIAL VIRUS; HYDRANGEA RINGSPOT VIRUS; INFLUENZA A VIRUS; MYCOPLASMA PNEUMONIAE; PARAINFLUENZA VIRUS; RESPIRATORY SYNCYTIAL VIRUS; RHINOVIRUS; SUBGROUP A;

EID: 36849046443     PISSN: 01466615     EISSN: 10969071     Source Type: Journal    
DOI: 10.1002/jmv.21067     Document Type: Article

References (42)

1. Allander T, Tammi MT, Eriksson M, Bjerkner A, Tiveljung-Lindell A, Andersson B. 2005. Cloning of a human parvovirus by molecular screening of respiratory tract samples. Proc Natl Acad Sci USA 102:12891-12896.
2. Al-Sonboli N, Hart CA, Al-Aeryani A, Banajeh SM, Al-Aghbari N, Dove W, Cuevas LE. 2005. Respiratory syncytial virus and human metapneumovirus in children with acute respiratory infections in Yemen. Pediatr Infect Dis J 24:734-736.
3. Al-Toum R, Bdour S, Ayyash H. 2006. Epidemiology and clinical characteristics of respiratory syncytial virus infections in Jordan. J Trop Pediatr 52:282-287.
4. Arden KE, McErlean P, Nissen MD, Sloots TP, Mackay IM. 2006. Frequent detection of human rhinoviruses, paramyxoviruses, coronaviruses and bocavirus during acute respiratory tract infections. J Med Virol 78:1232-1240.
5. Bdour S. 2001. Respiratory syncytial virus subgroup A in hospitalized children in Zarqa, Jordan. Ann Trop Paediatr 21:253-261.
6. Bont L, Versteegh J, Swelsen WT, Heijnen CJ, Kavelaars A, Brus F, Draaisma JM, Pekelharing-Berghuis M, van Diemen-Steenvoorde RA, Kimpen JL. 2002. Natural reinfection with respiratory syncytial virus does not boost virus-specific T-cell immunity. Pediatr Res 52:363-367.
7. Bryce J, Boschi-Pinto C, Shibuya K, Black RE, WHO Child Health Epidemiology Reference Group. 2005. WHO estimates of the causes of death in children. Lancet 365:1147-1152.
8. Cane PA. 2001. Molecular epidemiology of respiratory syncytial virus. Rev Med Virol 11:103-116.
9. Cane PA, Pringle CR. 1991. Respiratory syncytial virus heterogeneity during an epidemic: Analysis by limited nucleotide sequencing (SH gene) and restriction mapping (N gene). J Gen Virol 72:349-357.
10. Cane PA, Pringle CR. 1992. Molecular epidemiology of respiratory syncytial virus: Rapid identification of subgroup A lineages. J Virol Methods 40:297-306.
11. Choi EH, Lee HJ, Kim SJ, Eun BW, Kim NH, Lee JA, Lee JH, Song EK, Kim SH, Park JY, Sung JY. 2006. The association of newly identified respiratory viruses with lower respiratory tract infections in Korean children, 2000-2005. Clin Infect Dis 43:585-592.
12. Collins PL, Huang YT, Wertz GW. 1984. Identification of a tenth mRNA of respiratory syncytial virus and assignment of polypeptides to the 10 viral genes. J Virol 49:572-578.
13. Collins PL, Chanock RM, Murphy BR. 2001. Respiratory syncytial virus. In: Knipe DM, Howley PM, editors. Fields virology, 4th edition. Philadelphia: Lippincot, Williams & Wilkins. pp 1443-1485.
14. Couroucli XI, Welty SE, Ramsay PL, Wearden ME, Fuentes-Garcia FJ, Ni J, Jacobs TN, Towbin JA, Bowles NE. 2000. Detection of microorganisms in the tracheal aspirates of preterm infants by polymerase chain reaction: Association of adenovirus with bronchopulmonary dysplasia. Pediatr Res 47:225-232.
15. Fletcher JN, Smyth RL, Thomas HM, Ashby D, Hart CA. 1997. Respiratory syncytial virus genotypes and disease severity among children in hospital. Arch Dis Child 77:508-511.
16. Foulongne V, Guyon G, Rodiere M, Segondy M. 2006. Human metapneumovirus infection in young children hospitalized with respiratory tract disease. Pediatr Infect Dis J 25:354-359.
17. Greensill J, McNamara PS, Dove W, Flanagan B, Smyth RL, Hart CA. 2003. Human metapneumovirus in severe respiratory syncytial virus bronchiolitis. Emerg Infect Dis 9:372-375.
18. Grondahl B, Puppe W, Hoppe A, Kuhne I, Weigl JAI, Schmitt H-J. 1999. Rapid identification of nine microorganisms causing acute respiratory tract infections by single tube multiplex reverse transcription - PCR: Feasibility study. J Clin Microbiol 37:1-7.
19. Hall CB, Walsh EE, Schnabel KC, Long CE, McConnochie KM, Hildreth SW, Anderson LJ. 1990. Occurrence of groups A and B of respiratory syncytial virus over 15 years: Associated epidemiologic and clinical characteristics in hospitalized and ambulatory children. J Infect Dis 162:1283-1290.
20. Hayden FG. 2004. Rhinovirus and the lower respiratory tract. Rev Med Virol 14:17-31.
21. Kaplan NM, Dove W, Abu-Zeid AF, Shamoon HE, Abd-Eldayem SA, Hart CA. 2006. Human bocavirus infection among children, Jordan. Emerg Infect Dis 12:1418-1420.
22. Maggi F, Pifferi M, Vatteroni M, Fornai C, Tempestini E, Anzilotti S, Lanini L, Andreoli E, Ragazzo V, Pistello M, Specter S, Rendinelli M. 2003. Human metapneumovirus associated with respiratory tract infections in a 3-year study of nasal swabs from infants in Italy. J Clin Microbiol 41:2987-2991.
23. Maitreyi RS, Broor S, Kabra SK, Ghosh M, Seth P, Dar L, Prasad AK. 2000. Rapid detection of respiratory viruses by centrifugation enhanced cultures from children with acute lower respiratory tract infections. J Clin Virol 16:41-47.
24. Manning A, Russell V, Eastick K, Leadbetter N, Templeton K, Simmonds P. 2006. Epidemiological profile and clinical associations of human bocavirus and other human parvoviruses. J Infect Dis 194:1283-1290.
25. Meqdam MM, Nasrallah GK. 2000. Enhanced detection of respiratory syncytial virus by shell vial in children hospitalized with respiratory illnesses in Northern Jordan. J Med Virol 62:518-523.
26. Mufson MA, Orvell C, Rafnar B, Norrby E. 1985. Two distinct subtypes of human respiratory syncytial virus. J Gen Virol 66:2111-2124.
27. Palomo C, Cane PA, Melero JA. 2000. Evaluation of the antibody specificities of human convalescent-phase sera against the attachment (G) protein of human respiratory syncytial virus: Influence of strain variation and carbohydrate side chains. J Med Virol 60:468-474.
28. Papadopoulos NG, Moustaki M, Tsolia M, Bossios A, Astra E, Prezerakou A, Gourgiotis D, Kafetzis D. 2002. Association of rhinovirus infection with increased disease severity in acute bronchiolitis. Am J Respir Crit Care Med 165:1285-1289.
29. Peret TC, Hall CB, Schnabel KC, Golub JA, Anderson LJ. 1998. Circulation patterns of genetically distinct group A and B strains of human respiratory syncytial virus in a community. J Gen Virol 79:2221-2229.
30. Peret TC, Hall CB, Hammond GW, Piedra PA, Storch GA, Sullender WM, Tsou C, Anderson LJ. 2000. Circulation patterns of group A and B human respiratory syncytial virus genotypes in 5 communities in North America. J Infect Dis 181:1891-1896.
31. Pio A. 2003. Standard case management of pneumonia in children in developing countries: The cornerstone of the acute respiratory infection programme. Bull World Health Organ 81:298-300.
32. Semple MG, Cowell A, Dove W, Greensill J, McNamara PS, Halfhide C, Shears P, Smyth RL, Hart CA. 2005. Dual infection in infants by human metapneumovirus and human respiratory syncytial virus is associated with severe bronchiolitis. J Infect Dis 191:382-386.
33. Serafino RL, Gurgel RQ, Dove W, Hart CA, Cuevas LE. 2004. Respiratory syncytial virus and metapneumovirus in children over two seasons with a high incidence of respiratory infections in Brazil. Ann Trop Paediatr 24:213-217.
34. Shay DK, Holman RC, Roosevelt GE, Clarke MJ, Anderson LJ. 2001. Bronchiolitis-associated mortality and estimates of respiratory syncytial virus-associated deaths among US children, 1979-1997. J Infect Dis 183:16-22.
35. Sloots TP, McErlean P, Speicher DJ, Arden KE, Nissen MD, Mackay IM. 2006. Evidence of human Coronavirus HKU1 and human bocavirus in Australian children. J Clin Virol 35:99-102.
36. Straliotto SM, Siqueira MM, Muller RL, Fischer GB, Cunha ML, Nestor SM. 2002. Viral etiology of acute respiratory infections among children in Porto Alegre, RS, Brazil. Rev Soc Bras Med Trop 35:283-291.
37. Sullender WM, Sun L, Anderson LJ. 1993. Analysis of respiratory syncytial virus genetic variability with amplified cDNAs. J Clin Microbiol 31:1224-1231.
38. Templeton KE, Scheltinga SA, Beersma MF, Kroes AC, Claas EC. 2004. Rapid and sensitive method using multiplex real-time PCR for diagnosis of infections by influenza A and influenza B viruses, respiratory syncytial virus, and parainfluenza viruses 1, 2, 3 and 4. J Clin Microbiol 42:1564-1569.
39. Viegas M, Mistchenko AS. 2005. Molecular epidemiology of human respiratory syncytial virus subgroup A over a six-year period (1999-2004) in Argentina. J Med Virol 77:302-310.
40. Viegas M, Barrero PR, Maffey AF, Mistchenko AS. 2004. Respiratory viruses seasonality in children under five years of age in Buenos Aires, Argentina: A five-year analysis. J Infect 49:222-228.
41. Walsh EE, McConnochie KM, Long CE, Hall CB. 1997. Severity of respiratory syncytial virus infection is related to virus strain. J Infect Dis 175:814-820.
42. Wilkesmann A, Schildgen O, Eis-Hubinger AM, Geikowski T, Glatzel T, Lentze MJ, Bode U, Simon A. 2006. Human metapneumo-virus infections cause similar symptoms and clinical severity as respiratory syncytial virus infections. Eur J Pediatr 165:467-475.