-
1
-
-
0030779855
-
Nigerian rotavirus serotype G8 could not be typed by PCR due to nucleotide mutation at the 3′ end of the primer binding site
-
Adah M.I., Rohwedder A., Olaleyle O.D., and Werchau H. Nigerian rotavirus serotype G8 could not be typed by PCR due to nucleotide mutation at the 3′ end of the primer binding site. Arch. Virol. 142 (1997) 1881-1887
-
(1997)
Arch. Virol.
, vol.142
, pp. 1881-1887
-
-
Adah, M.I.1
Rohwedder, A.2
Olaleyle, O.D.3
Werchau, H.4
-
2
-
-
0036049771
-
Rotavirus strain diversity in Rio de Janeiro, Brazil: characterization of VP4 and VP7 genotypes in hospitalized children
-
Araujo I.T., Fialho A.M., de Assis R.M., Rocha M., Galvao M., Cruz C.M., Ferreira M.S., and Leite J.P. Rotavirus strain diversity in Rio de Janeiro, Brazil: characterization of VP4 and VP7 genotypes in hospitalized children. J. Trop. Pediatr. 48 (2002) 214-218
-
(2002)
J. Trop. Pediatr.
, vol.48
, pp. 214-218
-
-
Araujo, I.T.1
Fialho, A.M.2
de Assis, R.M.3
Rocha, M.4
Galvao, M.5
Cruz, C.M.6
Ferreira, M.S.7
Leite, J.P.8
-
3
-
-
14944354465
-
Genetic variability among serotype G4 Italian human rotaviruses
-
Arista S., Giammanco G.M., De Grazia S., Colomba C., and Martella V. Genetic variability among serotype G4 Italian human rotaviruses. J. Clin. Microbiol. 43 (2005) 1420-1425
-
(2005)
J. Clin. Microbiol.
, vol.43
, pp. 1420-1425
-
-
Arista, S.1
Giammanco, G.M.2
De Grazia, S.3
Colomba, C.4
Martella, V.5
-
4
-
-
33746191705
-
Comparative study of the epidemiology of rotavirus in children from a community-based birth cohort and a hospital in South India
-
Banerjee I., Ramani S., Primrose B., Moses P., Iturriza-Gomara M., Gray J.J., Jaffar S., Monica B., Muliyil J.P., Brown D.W., Estes M.K., and Kang G. Comparative study of the epidemiology of rotavirus in children from a community-based birth cohort and a hospital in South India. J. Clin. Microbiol. 44 (2006) 2468-2474
-
(2006)
J. Clin. Microbiol.
, vol.44
, pp. 2468-2474
-
-
Banerjee, I.1
Ramani, S.2
Primrose, B.3
Moses, P.4
Iturriza-Gomara, M.5
Gray, J.J.6
Jaffar, S.7
Monica, B.8
Muliyil, J.P.9
Brown, D.W.10
Estes, M.K.11
Kang, G.12
-
5
-
-
4644268839
-
Sequencing and phylogenetic analysis of human genotype P[6] rotavirus strains detected in Hungary provides evidence for genetic heterogeneity within the P[6] VP4 gene
-
Banyai K., Martella V., Jakab F., Melegh B., and Szucs G. Sequencing and phylogenetic analysis of human genotype P[6] rotavirus strains detected in Hungary provides evidence for genetic heterogeneity within the P[6] VP4 gene. J. Clin. Microbiol. 42 (2004) 4338-4343
-
(2004)
J. Clin. Microbiol.
, vol.42
, pp. 4338-4343
-
-
Banyai, K.1
Martella, V.2
Jakab, F.3
Melegh, B.4
Szucs, G.5
-
6
-
-
0025089978
-
Rapid and simple method for purification of nucleic acids
-
Boom R., Sol C.J., Salimans M.M., Jansen C.L., Wertheim-van Dillen P.M., and van der Noordaa J. Rapid and simple method for purification of nucleic acids. J. Clin. Microbiol. 28 (1990) 495-503
-
(1990)
J. Clin. Microbiol.
, vol.28
, pp. 495-503
-
-
Boom, R.1
Sol, C.J.2
Salimans, M.M.3
Jansen, C.L.4
Wertheim-van Dillen, P.M.5
van der Noordaa, J.6
-
7
-
-
0036246241
-
Detection, subgroup specificity, and genotype diversity of rotavirus strains in children with acute diarrhea in Paraguay
-
Coluchi N., Munford V., Manzur J., Vazquez C., Escobar M., Weber E., Marmol P., and Racz M.L. Detection, subgroup specificity, and genotype diversity of rotavirus strains in children with acute diarrhea in Paraguay. J. Clin. Microbiol. 40 (2002) 1709-1714
-
(2002)
J. Clin. Microbiol.
, vol.40
, pp. 1709-1714
-
-
Coluchi, N.1
Munford, V.2
Manzur, J.3
Vazquez, C.4
Escobar, M.5
Weber, E.6
Marmol, P.7
Racz, M.L.8
-
8
-
-
0035092467
-
Rotavirus strain diversity in Blantyre, Malawi, from 1997 to 1999
-
Cunliffe N.A., Gondwe J.S., Graham S.M., Thindwa B.D., Dove W., Broadhead R.L., Molyneux M.E., and Hart C.A. Rotavirus strain diversity in Blantyre, Malawi, from 1997 to 1999. J. Clin. Microbiol. 39 (2001) 836-843
-
(2001)
J. Clin. Microbiol.
, vol.39
, pp. 836-843
-
-
Cunliffe, N.A.1
Gondwe, J.S.2
Graham, S.M.3
Thindwa, B.D.4
Dove, W.5
Broadhead, R.L.6
Molyneux, M.E.7
Hart, C.A.8
-
9
-
-
0028289680
-
Characterization of rotavirus strains from newborns in New Delhi, India
-
Das B.K., Gentsch J.R., Cicirello H.G., Woods P.A., Gupta A., Ramachandran M., Kumar R., Bhan M.K., and Glass R.I. Characterization of rotavirus strains from newborns in New Delhi, India. J. Clin. Microbiol. 32 (1994) 1820-1822
-
(1994)
J. Clin. Microbiol.
, vol.32
, pp. 1820-1822
-
-
Das, B.K.1
Gentsch, J.R.2
Cicirello, H.G.3
Woods, P.A.4
Gupta, A.5
Ramachandran, M.6
Kumar, R.7
Bhan, M.K.8
Glass, R.I.9
-
10
-
-
10744233131
-
Genetic variability of human rotavirus strains isolated from Eastern and Northern India
-
Das S., Varghese V., Chaudhuri S., Barman P., Kojima K., Dutta P., Bhattacharya S.K., Krishnan T., Kobayashi N., and Naik T.N. Genetic variability of human rotavirus strains isolated from Eastern and Northern India. J. Med. Virol. 72 (2004) 156-161
-
(2004)
J. Med. Virol.
, vol.72
, pp. 156-161
-
-
Das, S.1
Varghese, V.2
Chaudhuri, S.3
Barman, P.4
Kojima, K.5
Dutta, P.6
Bhattacharya, S.K.7
Krishnan, T.8
Kobayashi, N.9
Naik, T.N.10
-
12
-
-
1542374059
-
Rotavirus typing methods and algorithms
-
Fischer T.K., and Gentsch J.R. Rotavirus typing methods and algorithms. Rev. Med. Virol. 14 (2004) 71-82
-
(2004)
Rev. Med. Virol.
, vol.14
, pp. 71-82
-
-
Fischer, T.K.1
Gentsch, J.R.2
-
13
-
-
0026686160
-
Identification of group A rotavirus gene 4 types by polymerase chain reaction
-
Gentsch J.R., Glass R.I., Woods P., Gouvea V., Gorziglia M., Flores J., Das B.K., and Bhan M.K. Identification of group A rotavirus gene 4 types by polymerase chain reaction. J. Clin. Microbiol. 30 (1992) 1365-1373
-
(1992)
J. Clin. Microbiol.
, vol.30
, pp. 1365-1373
-
-
Gentsch, J.R.1
Glass, R.I.2
Woods, P.3
Gouvea, V.4
Gorziglia, M.5
Flores, J.6
Das, B.K.7
Bhan, M.K.8
-
14
-
-
23944461107
-
Serotype diversity and reassortment between human and animal rotavirus strains: implications for rotavirus vaccine programs
-
Gentsch J.R., Laird A.R., Bielfelt B., Griffin D.D., Banyai K., Ramachandran M., Jain V., Cunliffe N.A., Nakagomi O., Kirkwood C.D., Fischer T.K., Parashar U.D., Bresee J.S., Jiang B., and Glass R.I. Serotype diversity and reassortment between human and animal rotavirus strains: implications for rotavirus vaccine programs. J. Infect. Dis. 192 Suppl. 1 (2005) S146-S159
-
(2005)
J. Infect. Dis.
, vol.192
, Issue.SUPPL. 1
-
-
Gentsch, J.R.1
Laird, A.R.2
Bielfelt, B.3
Griffin, D.D.4
Banyai, K.5
Ramachandran, M.6
Jain, V.7
Cunliffe, N.A.8
Nakagomi, O.9
Kirkwood, C.D.10
Fischer, T.K.11
Parashar, U.D.12
Bresee, J.S.13
Jiang, B.14
Glass, R.I.15
-
15
-
-
0034788177
-
Amino acid substitution within the VP7 protein of G2 rotavirus strains associated with failure to serotype
-
Gomara M.I., Cubitt D., Desselberger U., and Gray J. Amino acid substitution within the VP7 protein of G2 rotavirus strains associated with failure to serotype. J. Clin. Microbiol. 39 (2001) 3796-3798
-
(2001)
J. Clin. Microbiol.
, vol.39
, pp. 3796-3798
-
-
Gomara, M.I.1
Cubitt, D.2
Desselberger, U.3
Gray, J.4
-
16
-
-
0025166405
-
Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens
-
Gouvea V., Glass R.I., Woods P., Taniguchi K., Clark H.F., Forrester B., and Fang Z.Y. Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J. Clin. Microbiol. 28 (1990) 276-282
-
(1990)
J. Clin. Microbiol.
, vol.28
, pp. 276-282
-
-
Gouvea, V.1
Glass, R.I.2
Woods, P.3
Taniguchi, K.4
Clark, H.F.5
Forrester, B.6
Fang, Z.Y.7
-
17
-
-
0028268868
-
Identification of bovine and porcine rotavirus G types by PCR
-
Gouvea V., Santos N., and Timenetsky Mdo C. Identification of bovine and porcine rotavirus G types by PCR. J. Clin. Microbiol. 32 (1994) 1338-1340
-
(1994)
J. Clin. Microbiol.
, vol.32
, pp. 1338-1340
-
-
Gouvea, V.1
Santos, N.2
Timenetsky Mdo, C.3
-
18
-
-
0028349166
-
VP4 typing of bovine and porcine group A rotaviruses by PCR
-
Gouvea V., Santos N., and Timenetsky Mdo C. VP4 typing of bovine and porcine group A rotaviruses by PCR. J. Clin. Microbiol. 32 (1994) 1333-1337
-
(1994)
J. Clin. Microbiol.
, vol.32
, pp. 1333-1337
-
-
Gouvea, V.1
Santos, N.2
Timenetsky Mdo, C.3
-
19
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall T. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symp. Ser. 41 (1999) 95-98
-
(1999)
Nucl. Acids Symp. Ser.
, vol.41
, pp. 95-98
-
-
Hall, T.1
-
20
-
-
17544396312
-
Diversity within the VP4 gene of rotavirus P[8] strains: implications for reverse transcription-PCR genotyping
-
Iturriza-Gomara M., Green J., Brown D.W., Desselberger U., and Gray J.J. Diversity within the VP4 gene of rotavirus P[8] strains: implications for reverse transcription-PCR genotyping. J. Clin. Microbiol. 38 (2000) 898-901
-
(2000)
J. Clin. Microbiol.
, vol.38
, pp. 898-901
-
-
Iturriza-Gomara, M.1
Green, J.2
Brown, D.W.3
Desselberger, U.4
Gray, J.J.5
-
21
-
-
5644234201
-
Rotavirus genotyping: keeping up with an evolving population of human rotaviruses
-
Iturriza-Gomara M., Kang G., and Gray J. Rotavirus genotyping: keeping up with an evolving population of human rotaviruses. J. Clin. Virol. 31 (2004) 259-265
-
(2004)
J. Clin. Virol.
, vol.31
, pp. 259-265
-
-
Iturriza-Gomara, M.1
Kang, G.2
Gray, J.3
-
22
-
-
3242810318
-
MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar S., Tamura K., and Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform. 5 (2004) 150-163
-
(2004)
Brief Bioinform.
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
23
-
-
0025305576
-
Effects of primer-template mismatches on the polymerase chain reaction: human immunodeficiency virus type 1 model studies
-
Kwok S., Kellogg D.E., McKinney N., Spasic D., Goda L., Levenson C., and Sninsky J.J. Effects of primer-template mismatches on the polymerase chain reaction: human immunodeficiency virus type 1 model studies. Nucleic Acids Res. 18 (1990) 999-1005
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 999-1005
-
-
Kwok, S.1
Kellogg, D.E.2
McKinney, N.3
Spasic, D.4
Goda, L.5
Levenson, C.6
Sninsky, J.J.7
-
24
-
-
30044449327
-
Relationships among porcine and human P[6] rotaviruses: evidence that the different human P[6] lineages have originated from multiple interspecies transmission events
-
Martella V., Banyai K., Ciarlet M., Iturriza-Gomara M., Lorusso E., De Grazia S., Arista S., Decaro N., Elia G., Cavalli A., Corrente M., Lavazza A., Baselga R., and Buonavoglia C. Relationships among porcine and human P[6] rotaviruses: evidence that the different human P[6] lineages have originated from multiple interspecies transmission events. Virology 344 (2006) 509-519
-
(2006)
Virology
, vol.344
, pp. 509-519
-
-
Martella, V.1
Banyai, K.2
Ciarlet, M.3
Iturriza-Gomara, M.4
Lorusso, E.5
De Grazia, S.6
Arista, S.7
Decaro, N.8
Elia, G.9
Cavalli, A.10
Corrente, M.11
Lavazza, A.12
Baselga, R.13
Buonavoglia, C.14
-
25
-
-
33644816298
-
Identification of a novel VP4 genotype carried by a serotype G5 porcine rotavirus strain
-
Martella V., Ciarlet M., Banyai K., Lorusso E., Cavalli A., Corrente M., Elia G., Arista S., Camero M., Desario C., Decaro N., Lavazza A., and Buonavoglia C. Identification of a novel VP4 genotype carried by a serotype G5 porcine rotavirus strain. Virology 346 (2006) 301-311
-
(2006)
Virology
, vol.346
, pp. 301-311
-
-
Martella, V.1
Ciarlet, M.2
Banyai, K.3
Lorusso, E.4
Cavalli, A.5
Corrente, M.6
Elia, G.7
Arista, S.8
Camero, M.9
Desario, C.10
Decaro, N.11
Lavazza, A.12
Buonavoglia, C.13
-
26
-
-
21144445381
-
Sequence analysis of the VP7 and VP4 genes identifies a novel VP7 gene allele of porcine rotaviruses, sharing a common evolutionary origin with human G2 rotaviruses
-
Martella V., Ciarlet M., Baselga R., Arista S., Elia G., Lorusso E., Banyai K., Terio V., Madio A., Ruggeri F.M., Falcone E., Camero M., Decaro N., and Buonavoglia C. Sequence analysis of the VP7 and VP4 genes identifies a novel VP7 gene allele of porcine rotaviruses, sharing a common evolutionary origin with human G2 rotaviruses. Virology 337 (2005) 111-123
-
(2005)
Virology
, vol.337
, pp. 111-123
-
-
Martella, V.1
Ciarlet, M.2
Baselga, R.3
Arista, S.4
Elia, G.5
Lorusso, E.6
Banyai, K.7
Terio, V.8
Madio, A.9
Ruggeri, F.M.10
Falcone, E.11
Camero, M.12
Decaro, N.13
Buonavoglia, C.14
-
27
-
-
10744220566
-
Nucleotide variation in the VP7 gene affects PCR genotyping of G9 rotaviruses identified in Italy
-
Martella V., Terio V., Arista S., Elia G., Corrente M., Madio A., Pratelli A., Tempesta M., Cirani A., and Buonavoglia C. Nucleotide variation in the VP7 gene affects PCR genotyping of G9 rotaviruses identified in Italy. J. Med. Virol. 72 (2004) 143-148
-
(2004)
J. Med. Virol.
, vol.72
, pp. 143-148
-
-
Martella, V.1
Terio, V.2
Arista, S.3
Elia, G.4
Corrente, M.5
Madio, A.6
Pratelli, A.7
Tempesta, M.8
Cirani, A.9
Buonavoglia, C.10
-
28
-
-
0347695009
-
Antigenic and genetic characterization of serotype G2 human rotavirus strains from South Africa from 1984 to 1998
-
Page N.A., and Steele A.D. Antigenic and genetic characterization of serotype G2 human rotavirus strains from South Africa from 1984 to 1998. J. Med. Virol. 72 (2004) 320-327
-
(2004)
J. Med. Virol.
, vol.72
, pp. 320-327
-
-
Page, N.A.1
Steele, A.D.2
-
30
-
-
27744543467
-
Molecular characterization and genetic variation of the VP7 gene of human rotaviruses isolated in Paraguay
-
Parra G.I., Bok K., Martinez V., Russomando G., and Gomez J. Molecular characterization and genetic variation of the VP7 gene of human rotaviruses isolated in Paraguay. J. Med. Virol. 77 (2005) 579-586
-
(2005)
J. Med. Virol.
, vol.77
, pp. 579-586
-
-
Parra, G.I.1
Bok, K.2
Martinez, V.3
Russomando, G.4
Gomez, J.5
-
31
-
-
33745298729
-
Nucleotide mismatches between the VP7 gene and the primer are associated with genotyping failure of a specific lineage from G1 rotavirus strains
-
Parra G.I., and Espinola E.E. Nucleotide mismatches between the VP7 gene and the primer are associated with genotyping failure of a specific lineage from G1 rotavirus strains. Virol. J. 3 (2006) 35
-
(2006)
Virol. J.
, vol.3
, pp. 35
-
-
Parra, G.I.1
Espinola, E.E.2
-
32
-
-
34548674905
-
-
Parra, G.I., Espinola, E.E., Amarilla, A.A., Stupka, J., Martinez, M., Zunini, M., Galeano, M.E., Gomes, K., Russomando, G., Arbiza, J., in press. Diversity of group A rotavirus strains circulating in Paraguay from 2002 to 2005: detection of an atypical G1 in South America. J. Clin. Virol. doi:10.1016/j.jcv.2007.07.006.
-
-
-
-
33
-
-
33846578827
-
Genetic characterization of group A rotavirus strains circulating among children with acute gastroenteritis in Japan in 2004-2005
-
Phan T.G., Khamrin P., Trinh D.Q., Dey S.K., Yagyu F., Okitsu S., Nishio O., and Ushijima H. Genetic characterization of group A rotavirus strains circulating among children with acute gastroenteritis in Japan in 2004-2005. Infect. Genet. Evol. 7 (2007) 247-253
-
(2007)
Infect. Genet. Evol.
, vol.7
, pp. 247-253
-
-
Phan, T.G.1
Khamrin, P.2
Trinh, D.Q.3
Dey, S.K.4
Yagyu, F.5
Okitsu, S.6
Nishio, O.7
Ushijima, H.8
-
34
-
-
21144435785
-
Typing of human rotaviruses: nucleotide mismatches between the VP7 gene and primer are associated with genotyping failure
-
Rahman M., Sultana R., Podder G., Faruque A.S., Matthijnssens J., Zaman K., Breiman R.F., Sack D.A., Van Ranst M., and Azim T. Typing of human rotaviruses: nucleotide mismatches between the VP7 gene and primer are associated with genotyping failure. Virol. J. 2 (2005) 24
-
(2005)
Virol. J.
, vol.2
, pp. 24
-
-
Rahman, M.1
Sultana, R.2
Podder, G.3
Faruque, A.S.4
Matthijnssens, J.5
Zaman, K.6
Breiman, R.F.7
Sack, D.A.8
Van Ranst, M.9
Azim, T.10
-
35
-
-
11244302672
-
Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine
-
Santos N., and Hoshino Y. Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine. Rev. Med. Virol. 15 (2005) 29-56
-
(2005)
Rev. Med. Virol.
, vol.15
, pp. 29-56
-
-
Santos, N.1
Hoshino, Y.2
-
36
-
-
0031821128
-
Detection of rotavirus types G8 and G10 among Brazilian children with diarrhea
-
Santos N., Lima R.C., Pereira C.F., and Gouvea V. Detection of rotavirus types G8 and G10 among Brazilian children with diarrhea. J. Clin. Microbiol. 36 (1998) 2727-2729
-
(1998)
J. Clin. Microbiol.
, vol.36
, pp. 2727-2729
-
-
Santos, N.1
Lima, R.C.2
Pereira, C.F.3
Gouvea, V.4
-
37
-
-
0038452669
-
VP7 gene polymorphism of serotype G9 rotavirus strains and its impact on G genotype determination by PCR
-
Santos N., Volotao E.M., Soares C.C., Albuquerque M.C., da Silva F.M., Chizhikov V., and Hoshino Y. VP7 gene polymorphism of serotype G9 rotavirus strains and its impact on G genotype determination by PCR. Virus Res. 93 (2003) 127-138
-
(2003)
Virus Res.
, vol.93
, pp. 127-138
-
-
Santos, N.1
Volotao, E.M.2
Soares, C.C.3
Albuquerque, M.C.4
da Silva, F.M.5
Chizhikov, V.6
Hoshino, Y.7
-
38
-
-
0024376686
-
Minimal homology requirements for PCR primers
-
Sommer R., and Tautz D. Minimal homology requirements for PCR primers. Nucleic Acids Res. 17 (1989) 6749
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 6749
-
-
Sommer, R.1
Tautz, D.2
-
39
-
-
34248202280
-
Detection of human rotavirus G9P[8] strains circulating in Argentina: phylogenetic analysis of VP7 and NSP4 genes
-
Stupka J.A., Parra G.I., Gomez J., and Arbiza J. Detection of human rotavirus G9P[8] strains circulating in Argentina: phylogenetic analysis of VP7 and NSP4 genes. J. Med. Virol. 79 (2007) 838-842
-
(2007)
J. Med. Virol.
, vol.79
, pp. 838-842
-
-
Stupka, J.A.1
Parra, G.I.2
Gomez, J.3
Arbiza, J.4
-
40
-
-
0026673260
-
Identification of human and bovine rotavirus serotypes by polymerase chain reaction
-
Taniguchi K., Wakasugi F., Pongsuwanna Y., Urasawa T., Ukae S., Chiba S., and Urasawa S. Identification of human and bovine rotavirus serotypes by polymerase chain reaction. Epidemiol. Infect. 109 (1992) 303-312
-
(1992)
Epidemiol. Infect.
, vol.109
, pp. 303-312
-
-
Taniguchi, K.1
Wakasugi, F.2
Pongsuwanna, Y.3
Urasawa, T.4
Ukae, S.5
Chiba, S.6
Urasawa, S.7
|