Differential proteome analysis of hagfish dental and somatic skeletal muscles

Marine Biotechnology

Volumn 9, Issue 6, 2007, Pages 689-700

  Chiu, Kuo Hsun ^a   Huang, Hurng Wern ^a,b   Mok, Hin Kiu ^a  

^a NATIONAL SUN YAT SEN UNIVERSITY   (Taiwan)

^b KAOHSIUNG MEDICAL UNIVERSITY   (Taiwan)

Author keywords

Dental muscle; Hagfish; Proteomics; Two dimensional electrophoresis; White muscle

Indexed keywords

DENTAL MUSCLE; HAGFISH; PROTEOMICS; TWO-DIMENSIONAL ELECTROPHORESIS; WHITE MUSCLE;

DENTISTRY; ELECTROPHORESIS; GENE EXPRESSION; MUSCLE; PROTEINS;

FISH;

MUSCLE PROTEIN; PROTEOME;

ENZYME; FISH; MUSCLE; PROTEIN; PROTEOMICS;

ANIMAL; ANIMAL DISEASE; ARTICLE; COMPARATIVE STUDY; CYTOLOGY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; HAGFISH; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; PHYSIOLOGY; PROTEOMICS; REPRODUCIBILITY; SKELETAL MUSCLE; TWO DIMENSIONAL GEL ELECTROPHORESIS;

ANIMALS; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; HAGFISHES; MASS SPECTROMETRY; MUSCLE PROTEINS; MUSCLE, SKELETAL; PROTEOME; PROTEOMICS; REPRODUCIBILITY OF RESULTS;

HAGFISH; VERTEBRATA;

EID: 36749029438     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-007-9020-6     Document Type: Article

References (45)

1. Bessman SP, Geiger PJ (1981) Transport of energy in muscle: the phosphorylcreatine shuttle. Science 211, 448-452
2. Biron DG, Agnew P, Marche L, Renault L, Sidobre C, Michalakis Y (2005) Proteome of Aedes aegypti larvae in response to infection by the intracellular parasite Vavraia culicis. Int J Parasitol 35, 1385-1397
3. Bosworth CA, Chou CW, Cole RB, Rees BB (2005) Protein expression patterns in zebrafish skeletal muscle: initial characterization and the effects of hypoxic exposure. Proteomics 5, 1362-1371
4. Bouley J, Chambon C, Picard B (2003) Proteome analysis applied to the study of muscle development and sensorial qualities of bovine meat. Sci Aliments 23, 75-78
5. Bouley J, Chambon C, Picard B (2004) Mapping of bovine skeletal muscle proteins using two-dimensional gel electrophoresis and mass spectrometry. Proteomics 4, 1811-1824
6. Candiano G, Bruschi M, Musante L, Santucci L, Ghiggeri GM, Carnemolla B, Orecchia P, Zardi L, Righetti PG (2004) Blue silver: a very sensitive colloidal Coomassie G-250 staining for proteome analysis. Electrophoresis 25, 1327-1333
7. Capitanio D, Vigano A, Ricci E, Cerretelli P, Wait R, Gelfi C (2005) Comparison of protein expression in human deltoideus and vastus lateralis muscles using two-dimensional gel electrophoresis. Proteomics 5, 2577-2586
8. Childress JJ (1995) Are there physiological and biochemical adaptations of metabolism in deep-sea animals? Trends Ecol Evol 10, 30-36
9. Childress JJ, Somero GN (1979) Depth-related enzymic activities in muscle, brain and heart of deep-living pelagic marine teleosts. Mar Biol 52, 273-283
10. Dupont A, Corseaux D, Dekeyzer O, Drobecq H, Guihot AL, Susen S, Vincentelli A, Amouyel P, Jude B, Pinet F (2005) The proteome and secretome of human arterial smooth muscle cells. Proteomics 5, 585-596
11. Flood PR (1979) The vascular supply of three fibre types in the parietal trunk muscle of the Atlantic hagfish (Myxine glutinosa, L). A light microscopic quantitative analysis and an evaluation of various methods to express capillary density relative to fibre types. Microvasc Res 17, 55-70
12. Gage JD, Tyler PA (1991) Deep-Sea Biology: A Natural History of Organisms at the Deep-Sea Floor. (Cambridge, NY: Cambridge University Press)
13. Gelfi C, De Palma S, Cerretelli P, Begum S, Wait R (2003) Two-dimensional protein map of human vastus lateralis muscle. Electrophoresis 24, 286-295
14. Gelfi C, Vigano A, De Palma S, Ripamonti M, Begum S, Cerretelli P, Wait R (2006) 2-D protein maps of rat gastrocnemius and soleus muscles: A tool for muscle plasticity assessment. Proteomics 6, 321-340
15. Hemmer W, Skarli M, Perriard JC, Wallimann T (1993) Effect of okadaic acid on protein phosphorylation patterns of chicken myogenic cells with special reference to creatine kinase. FEBS Lett 327, 35-40
16. Herbert BR, Molloy MP, Gooley AA, Walsh BJ, Bryson WG, Williams KL (1998) Improved protein solubility in two-dimensional electrophoresis using tributyl phosphine as reducing agent. Electrophoresis 19, 845-851
17. Hoh JFY (2002) "Superfast" or masticatory myosin and the evolution of jaw-closing muscles of vertebrates. J Exp Biol 205, 2203-2210
18. Horikoshi K (1998) Barophiles: deep-sea microorganisms adapted to an extreme environment. Curr Opin Microbiol 1, 291-295
19. Korneliussen H, Nicolaysen K (1973) Ultrastructure of four types of striated muscle fibers in the Atlantic hagfish (Myxine glutinosa, L.). Z Zellforsch Mikrosk Anat 143, 273-290
20. Li ZB, Lehar M, Samlan R, Flint PW (2005) Proteomic analysis of rat laryngeal muscle following denervation. Proteomics 5, 4764-4776
21. Liem KF, Bemis WE Jr, Walker WF, Grande L (2001) Functional Anatomy of the Vertebrates: An Evolutionary Perspective. (Fort Worth, TX: Harcourt)
22. López JL, Marina A, Vázquez J, Alvarez G (2002) A proteomic approach to the study of the marine mussels Mytilus edulis and M. galloprovincialis. Mar Biol 141, 217-223
23. McMillan CB, Wisner RL (2004) Review of the hagfishes (Myxinidae, Myxiniformes) of the northwestern Pacific Ocean, with descriptions of three new species, Eptatretus fernholmi, Paramyxine moki, and P. walkeri. Zool Stud 43, 51-73
24. Merkulova T, Lucas M, Jabet C, Lamande N, Rouzeau JD, Gros F, Lazar M, Keller A (1997) Biochemical characterization of the mouse muscle-specific enolase: developmental changes in electrophoretic variants and selective binding to other proteins. Biochem J 323, 791-800
25. Nelson DL, Cox MM (2004) Lehninger Principles of Biochemistry, 4th ed (New York: WH Freeman)
26. Okumura N, Hashida-Okumura A, Kita K, Matsubae M, Matsubara T, Takao T, Nagai K (2005) Proteomic analysis of slow- and fast-twitch skeletal muscles. Proteomics 5, 2896-2906
27. Peter JB, Barnard RJ, Edgerton VR, Gillespie CA, Stempel KE (1972) Metabolic profiles of three fiber types of skeletal muscle in guinea pigs and rabbits. Biochemistry 11, 2627-2633
28. Pineiro C, Barros-Velazquez J, Vazquez J, Figueras A, Gallardo JM (2003) Proteomics as a tool for the investigation of seafood and other marine products. J Proteome Res 2, 127-135
29. Ross MH, Romrell LJ, Kaye GI (1995) Histology: A Text and Atlas, 3rd ed (Baltimore: Williams & Wilkins)
30. Rowlerson A, Mascarello F, Veggetti A, Carpene E (1983) The fiber-type composition of the first branchial arch muscles in Carnivora and Primates. J Muscle Res Cell Motil 4, 443-472
31. Sanchez JC, Chiappe D, Converset V, Hoogland C, Binz PA, Paesano S, Appel RD, Wang S, Sennitt M, Nolan A, Cawthorne MA, Hochstrasser DF (2001) The mouse SWISS-2D PAGE database: a tool for proteomics study of diabetes and obesity. Proteomics 1, 136-163
32. Sebert P (2002) Fish at high pressure: a hundred year history. Comp Biochem Physiol 131A, 575-585
33. Sebert P, Peragon J, Barroso JB, Simon B, Melendez-Hevia E (1998) High hydrostatic pressure (101 ATA) changes the metabolic design of yellow freshwater eel muscle. Comp Biochem Physiol 121B, 195-200
34. Simon B, Sebert P, Cannmoisan C, Barthelemy L (1992) Muscle energetics in yellow fresh-water eels (Anguilla-Anguilla, L) exposed to high hydrostatic pressure (101-ATA) for 30 days. Comp Biochem Physiol 102B, 205-208
35. Somero GN (1992) Adaptations to high hydrostatic pressure. Annu Rev Physiol 54, 557-577
36. Somero GN (2003) Protein adaptations to temperature and pressure: complementary roles of adaptive changes in amino acid sequence and internal milieu. Comp Biochem Physiol 136B, 577-591
37. Staron RS, Pette D (1986) Correlation between myofibrillar ATPase activity and myosin heavy chain composition in rabbit muscle fibers. Histochem Cell Biol 86, 19-23
38. Stevens L, Bastide B, Bozzo C, Mounier Y (2004) Hybrid fibres under slow-to-fast transformations: expression is of myosin heavy and light chains in rat soleus muscle. Pflugers Arch 448, 507-514
39. Sullivan KM, Somero GN (1980) Enzyme activities of fish skeletal muscle and brain as influenced by depth of occurrence and habits of feeding and locomotion. Mar Biol 60, 91-99
40. Sun HW, Hui CF, Wu JL (1998) Cloning, characterization, and expression in Escherichia coli of three creatine kinase muscle isoenzyme cDNAs from carp (Cyprinus carpio) striated muscle. J Biol Chem 273, 33774-33780
41. Theron M, Guerrero F, Sebert P (2000) Improvement in the efficiency of oxidative phosphorylation in the freshwater eel acclimated to 10.1 MPa hydrostatic pressure. J Exp Biol 203, 3019-3023
42. Treberg JR, Martin RA, Driedzic WR (2003) Muscle enzyme activities in a deep-sea squaloid shark, Centroscyllium fabricii, compared with its shallow-living relative, Squalus acanthias. J Exp Zool 300A, 133-139
43. Westermeier R, Naven T (2002) Proteomics in Practice: A Laboratory Manual of Proteome Analysis. (Weinheim, Germany: Wiley-VCH Verlag-GmbH)
44. Wilkins MR, Williams KL (1997) Cross-species protein identification using amino acid composition, peptide mass fingerprinting, isoelectric point and molecular mass: a theoretical evaluation. J Theor Biol 186, 7-15
45. Winnard P, Cashon RE, Sidell BD, Vayda ME (2003) Isolation, characterization and nucleotide sequence of the muscle isoforms of creatine kinase from the Antarctic teleost Chaenocephalus aceratus. Comp Biochem Physiol 134B, 651-667