Identification of random amplified polymorphic DNA (RAPD) marker for differentiating male from female and sporophytic thalli of Gracilaria changii (Rhodophyta)

Journal of Applied Phycology

Volumn 19, Issue 6, 2007, Pages 763-769

  Sim, M C ^a   Lim, P E ^b   Gan, S Y ^b   Phang, S M ^a  

^a UNIVERSITY OF MALAYA   (Malaysia)

^b INTERNATIONAL MEDICAL UNIVERSITY   (Malaysia)

Author keywords

Gracilaria changii; Molecular sex markers; Random amplified polymorphic DNA (RAPD)

Indexed keywords

GRACILARIA; GRACILARIA CHANGII; RHODOPHYTA;

EID: 36448935674     PISSN: 09218971     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10811-007-9224-1     Document Type: Conference Paper

References (32)

1. Billot C, Boury S, Benet H, Kloareg B (1999) Development of RAPD markers for parentage analysis in Laminaria digitata. Bot Mar 42:307-314
2. Bouza N, Caujapé-Castells J, González-Pérez MA, Sosa PA (2006) Genetic structure of natural populations in the red algae Gelidium canariense (Gelidiales, Rhodophyta) investigated by random amplified polymorphic DNA (RAPD) markers. J Phycol 42:304-311
3. Byrne K, Zuccarello GC, West J, Liao ML, Kraft GT (2002) Gracilaria species (Gracilariaceae, Rhodophyta) from southeastern Australia, including a new species, Gracilaria perplexa sp. Nov.: morphology, molecular relationships and agar content. Phycol Res 50:295-311
4. Deputy JC, Ming R, Ma H, Liu Z, Fitch MMM, Wang M, Manshardt R, Stiles JI (2002) Molecular markers for sex determination in papaya (Carica papaya L.). Theor Appl Genet 106:107-111
5. Dutcher JA, Kapraun DF (1994) Random amplified polymorphic DNA (RAPD) identification of genetic variation in three species of Porphyra (Bangiales, Rhodophyta). J Appl Phycol 6:267-273
6. Gan SY (1999) Molecular taxonomic studies of Gracilaria changii from various locations using the Random Amplified Polymorphic DNA (RAPD) technique. M Sc Thesis, University of Malaya, Kuala Lumpur
7. Gan SY, Qin S, Othman RY, Yu DZ, Phang SM (2003) Transient expression of lacZ in particle bombarded Gracilaria changii (Gracilariales, Rhodophyta). J Appl Phycol 15:351-353
8. González M, Rolando M, Candia A, Gómez P, Cisternas M (1996) Organellar DNA restriction fragment length polymorphism (RFLP) and nuclear random amplified polymorphic DNA (RAPD) analyses of morphotypes of Gracilaria (Gracilariales, Rhodophyta) from Chile. Hydrobiologia 326/327:229-234
9. Ho CL, Phang SM, Tikki P (1995a) Application of polymerase chain reaction (PCR) using random amplified polymorphic DNA (RAPD) primers in the molecular identification of selected Sargassum species (Phaeophyta, Fucales). Eur J Phycol 30:273-280
10. Ho CL, Phang SM, Tikki P (1995b) Molecular characterization of Sargassum polycystum and S. siliquosum (Phaeophyta) by polymerase chain reaction (PCR) using random amplified polymorphic DNA (RAPD) primers. J Appl Phycol 73:33-41
11. Holloway AK, Strand MR, William CB, Antolin MF (2000) Linkage analysis of sex determination in Bracon sp. near hebetor (Hymenoptera: Braconidae). Genetics 154:205-212
12. Huh MK, Lee BK, Lee HY (2006) Genetic diversity and phylogenetic relationships in five Porphyra species revealed by RAPD analysis. Protistology 4:245-250
13. Iturra P, Medrano JF, Bagley M, Lam N, Vergara N, Marin JC (1998) Identification of sex chromosome molecular markers using RAPDs and fluorescent in situ hybridization in rainbow trout. Genetica 101:209-213
14. Jiang C, Sink KC (1997) RAPD and SCAR markers linked to the sex expression locus M in asparagus. Euphytica 94:329-333
15. Lemos EGM, Silva CLSP, Zaidan HA (2002) Identification of sex in Carica papaya L. using RAPD markers. Euphytica 127:179-184
16. Lim PE, Phang SM (2004) Gracilaria species (Gracilariales, Rhodophyta) of Malaysia including two new records. Malays J Sci 23:71-80
17. Lim PE, Thong KL, Phang SM (2001) Molecular differentiation of two morphological variants of Gracilaria salicornia. J Appl Phycol 13:335-342
18. Liu ZJ, Li P, Argue BJ, Dunham RA (1999) Random amplified polymorphic DNA markers: usefulness for gene mapping and analysis of genetic variation of catfish. Aquaculture 174:59-68
19. Mandolino G, Carboni A, Forapani S, Faeti V, Ranalli P (1999) Identification of DNA markers linked to the male sex in dioecious hemp (Cannabis sativa L.). Theor Appl Genet 98:86-92
20. Mandolino G, Carboni A, Bagatta M, Moliterni VMC, Ranalli P (2002) Occurrence and frequency of putatively Y chromosome linked DNA markers in Cannabis sativa L. Euphytica 126:211-218
21. Martinez EA, Destombe C, Quillet MC, Valero M (1999) Identification of random amplified polymorphic DNA (RAPD) markers highly linked to sex determination in the red alga Gracilaria gracilis. Mol Ecol 8:1533-1538
22. McHugh DJ (2003) A guide to seaweed industry. FAO Fisheries Technical Paper 441. FAO, Rome
23. Mizukami Y, Kito H, Kunimoto M, Kobayashi M (1998) Effect of DNA preparation from laver (Porphyra yezoensis) thalli on reproducibility of RAPD (random amplified polymorphic DNA) patterns. J Appl Phycol 10:23-29
24. Park JW, Cho YC, Nam BH, Jin HY, Sohn CH, Hong YK (1998) RAPD identification of genetic variation in seaweeds Hizikia fusiformis (Fucales, Phaeophyta). J Mar Biotechnol 6:62-64
25. Patwary MU, MacKay RM, Van der Meer JP (1993) Revealing genetic markers in Gelidium vagum (Rhodophyta) through the random amplified polymorphic DNA (RAPD) technique. J Phycol 29:216-222
26. Phang SM, Lewmanomont K (2001) Gracilaria changii (B. M. Xia & I. A. Abbott) I. A. Abbott, C. F. Chang & B. M. Xia. In: Reine P, Trono GC Jr (eds) Plant resources of South-East Asia, no. 15(1). Cryptogams: algae. Backhuys, Leiden, pp 178-180
27. Phang SM, Shaharuddin S, Noraishah H, Sasekumar A (1996) Studies on Gracilaria changii (Gracilariales, Rhodophyta) from Malaysian mangroves. Hydrobiologia 326/327:347-352
28. Törjék O, Bucherna N, Kiss E, Homoki H (2002) Novel male-specific molecular markers (MADC5, MADC6) in hemp. Euphytica 127:209-218
29. Valatka S, Makinen A, Yli-Mattila T (2000) Analysis of genetic diversity of Furcellaria lumbricalis (Gigartinales, Rhdophyta) in Baltic Sea by RAPD-PCR technique. Phycologia 39:110-117
30. Wong CL, Gan SY, Phang SM (2004) Morphological and molecular characterization and differentiation of Sargassum baccularia and S. polycystum (Phaeophyta). J Appl Phycol 16:439-445
31. Xu WJ, Wang BW, Cui KM (2004) RAPD and SCAR markers linked to sex determination in Eucommia ulmoides Oliv. Euphytica 136:233-238
32. Yakubov B, Barazani O, Golan-Goldhirsh (2005) Combination of SCAR primers and touchdown-PCR for sex identification in Pistacia vera L. Sci Hort 103:473-478