A molecular fraction collecting tool for the ABI 310 automated sequencer

Journal of Molecular Diagnostics

Volumn 9, Issue 5, 2007, Pages 598-603

  Lin, Ming Tseh ^a   Rich, Roy G ^a   Shipley, Royce F ^b   Hafez, Michael J ^a   Tseng, Li Hui ^a,c   Murphy, Kathleen M ^a   Gocke, Christopher D ^a   Eshleman, James R ^a  

^a JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b JOHNS HOPKINS HOSPITAL   (United States)

^c NATIONAL TAIWAN UNIVERSITY HOSPITAL   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

FIBROBLAST GROWTH FACTOR RECEPTOR 1;

AGAR GEL ELECTROPHORESIS; ARTICLE; AUTOANALYZER; CAPILLARY ELECTROPHORESIS; DNA DETERMINATION; DNA ISOLATION; DNA PURIFICATION; DNA SEQUENCE; GENE AMPLIFICATION; GENE DUPLICATION; GENE MUTATION; GENETIC ANALYSIS; POLYACRYLAMIDE GEL ELECTROPHORESIS; WILD TYPE;

EID: 36349015373     PISSN: 15251578     EISSN: None     Source Type: Journal    
DOI: 10.2353/jmoldx.2007.070022     Document Type: Article

References (15)

1. Hunkapiller T, Kaiser RJ, Koop BF, Hood L: Large-scale and automated DNA sequence determination. Science 1991, 254:59-67
2. Heller C: Principles of DNA separation with capillary electrophoresis. Electrophoresis 2001, 22:629-643
3. Gödde R, Akkad DA, Arning L, Dekomien G, Herchenbaoh J, Kunstmann E, Meins M, Wieczorek S, Epplen JT, Hoffjan S: Electrophoresis of DNA in human genetic diagnostics: state-of-the-art, alternatives and future prospects. Electrophoresis 2006, 27:939-946
4. Smith HO: Recovery of DNA from gels. Methods Enzymol 1980, 65:371-380
5. Bjourson AJ, Cooper JE: Band-stab PCR: a simple technique for the purification of individual PCR products. Nucleic Acids Res 1992, 20:4675
6. Wende M, Dorbic T, Wittig B: Novel procedure of elution and concentration of nucleic acids with NACS Prepac minicolumns by electrophoresis. Nucleic Acids Res 1985, 13:9043
7. Murphy KM, Levis M, Hafez MJ, Geiger T, Cooper LC, Smith BD, Small D, Berg KD: Detection of FLT3 internal tandem duplication and D835 mutations by a multiplex polymerase chain reaction and capillary electrophoresis assay. J Mol Diagn 2003, 5:96-102
8. Berg KD, Glaser CL, Thompson RE, Hamilton SR, Griffin CA, Eshleman JR: Detection of microsatellite instability by fluorescence multiplex polymerase chain reaction. J Mol Diagn 2000, 2:20-28
9. Lee SC, Berg KD, Racke FK, Griffin CA, Eshleman JR: Pseudo-spikes are common in histologically benign lymphoid tissues. J Mol Diagn 2000, 2:145-152
10. Berka J, Ruiz-Martinez MC, Hammond R, Minarik M, Foret F, Sosic Z, Kleparnik K, Karger BL: Application of high-resolution capillary array electrophoresis with automated fraction collection for GeneCalling trade mark analysis of the yeast genomic DNA. Electrophoresis 2003, 24:639-647
11. Irie T, Oshida T, Hasegawa H, Matsuoka Y, Li T, Oya Y, Tanaka T, Tsujimoto G, Kambara H: Automated DNA fragment collection by capillary array gel electrophoresis in search of differentially expressed genes. Electrophoresis 2000, 21:367-374
12. Müller O, Foret F, Karger BL: Design of a high-precision fraction collector for capillary electrophoresis. Anal Chem 1995, 67:2974-2980
13. Oefner PJ, Huber CG, Umlauft F, Berti GN, Stimpfl E, Bonn GK: High-resolution liquid chromatography of fluorescent dye-labeled nucleic acids. Anal Biochem 1994, 223:39-46
14. Marino MA, Devaney JM, Smith JK, Girard JE: Sequencing using capillary electrophoresis of short tandem repeat alleles separated and purified by high performance liquid chromatography. Electrophoresis 1998, 19:108-118
15. zur Stadt U, Eckert C, Rischewski J, Michael K, Golta S, Muller M, Schneppenheim R, Kabisch H: Identification and characterisation of clonal incomplete T-cell-receptor Vdelta2-Ddelta3/Ddelta2-Ddelta3 rearrangements by denaturing high-performance liquid chromatography and subsequent fragment collection: implications for minimal residual disease monitoring in childhood acute lymphoblastic leukemia. J Chromatogr B Analyt Technol Biomed Life Sci 2003, 792:287-298