메뉴 건너뛰기




Volumn 21, Issue 22, 2007, Pages 2874-2879

Riboswitch-dependent gene regulation and its evolution in the plant kingdom

Author keywords

Alternative splicing; Higher eukaryotes; Metabolite sensing; Riboswitch; Thiamine pyrophosphate

Indexed keywords

RNA PRECURSOR;

EID: 36248989143     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.443907     Document Type: Article
Times cited : (148)

References (25)
  • 1
    • 4544335124 scopus 로고    scopus 로고
    • The SHINE clade of AP2 domain transcription factors activates wax biosynthesis, alters cuticle properties, and confers drought tolerance when overexpressed in Arabidopsis
    • Aharoni, A., Dixit, S., Jetter, R., Thoenes, E., van Arkel, G., and Pereira, A. 2004a. The SHINE clade of AP2 domain transcription factors activates wax biosynthesis, alters cuticle properties, and confers drought tolerance when overexpressed in Arabidopsis. Plant Cell 16: 2463-2480.
    • (2004) Plant Cell , vol.16 , pp. 2463-2480
    • Aharoni, A.1    Dixit, S.2    Jetter, R.3    Thoenes, E.4    van Arkel, G.5    Pereira, A.6
  • 3
    • 84979182874 scopus 로고
    • Chlorophyll-deficient mutants in tomato requiring vitamin B1. I. Genetics and physiology
    • Boynton, J.E. 1966. Chlorophyll-deficient mutants in tomato requiring vitamin B1. I. Genetics and physiology. Hereditas 56: 171-199.
    • (1966) Hereditas , vol.56 , pp. 171-199
    • Boynton, J.E.1
  • 4
    • 10044274340 scopus 로고    scopus 로고
    • Influence of RNA secondary structure on the pre-mRNA splicing process
    • Buratti, E. and Baralle, F.E. 2004. Influence of RNA secondary structure on the pre-mRNA splicing process. Mol. Cell. Biol. 24: 10505-10514.
    • (2004) Mol. Cell. Biol , vol.24 , pp. 10505-10514
    • Buratti, E.1    Baralle, F.E.2
  • 5
    • 34249278470 scopus 로고    scopus 로고
    • Control of alternative RNA splicing and gene expression by eukaryotic riboswitches
    • Cheah, M.T., Wachter, A., Sudarsan, N., and Breaker, R.R. 2007. Control of alternative RNA splicing and gene expression by eukaryotic riboswitches. Nature 447: 497-500.
    • (2007) Nature , vol.447 , pp. 497-500
    • Cheah, M.T.1    Wachter, A.2    Sudarsan, N.3    Breaker, R.R.4
  • 6
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • Clough, S.J. and Bent, A.F. 1998. Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16: 735-743.
    • (1998) Plant J , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 8
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure from small quantities of fresh leaf tissues
    • Doyle, J. and Doyle, J. 1987. A rapid DNA isolation procedure from small quantities of fresh leaf tissues. Phytochem. Bull. 19: 11-15.
    • (1987) Phytochem. Bull , vol.19 , pp. 11-15
    • Doyle, J.1    Doyle, J.2
  • 9
    • 0024346633 scopus 로고
    • Rapid insertional mutagenesis of DNA by polymerase chain reaction (PCR)
    • Kammann, M., Laufs, J., Schell, J., and Gronenborn, B. 1989. Rapid insertional mutagenesis of DNA by polymerase chain reaction (PCR). Nucleic Acids Res. 17: 5404.
    • (1989) Nucleic Acids Res , vol.17 , pp. 5404
    • Kammann, M.1    Laufs, J.2    Schell, J.3    Gronenborn, B.4
  • 10
    • 0346366823 scopus 로고    scopus 로고
    • Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5′-UTR
    • Kubodera, T., Watanabe, M., Yoshiuchi, K., Yamashita, N., Nishimura, A., Nakai, S., Gomi, K., and Hanamoto, H. 2003. Thiamine-regulated gene expression of Aspergillus oryzae thiA requires splicing of the intron containing a riboswitch-like domain in the 5′-UTR. FEBS Lett. 555: 516-520.
    • (2003) FEBS Lett , vol.555 , pp. 516-520
    • Kubodera, T.1    Watanabe, M.2    Yoshiuchi, K.3    Yamashita, N.4    Nishimura, A.5    Nakai, S.6    Gomi, K.7    Hanamoto, H.8
  • 12
    • 0842334528 scopus 로고    scopus 로고
    • Adenine riboswitches and gene activation by disruption of a transcription terminator
    • Mandal, M. and Breaker, R.R. 2004. Adenine riboswitches and gene activation by disruption of a transcription terminator. Nat. Struct. Mol. Biol. 11: 29-35.
    • (2004) Nat. Struct. Mol. Biol , vol.11 , pp. 29-35
    • Mandal, M.1    Breaker, R.R.2
  • 13
    • 13244282986 scopus 로고    scopus 로고
    • Role of mRNA transcript stability in modulation of expression of the gene encoding thrombin activable fibrinolysis inhibitor
    • Maret, D., Boffa, M.B., Brien, D.F., Nesheim, M.E., and Koschinsky, M.L. 2004. Role of mRNA transcript stability in modulation of expression of the gene encoding thrombin activable fibrinolysis inhibitor. J. Thromb. Haemost. 2: 1969-1979.
    • (2004) J. Thromb. Haemost , vol.2 , pp. 1969-1979
    • Maret, D.1    Boffa, M.B.2    Brien, D.F.3    Nesheim, M.E.4    Koschinsky, M.L.5
  • 15
    • 33745685059 scopus 로고    scopus 로고
    • Flipping riboswitches
    • Nudler, E. 2006. Flipping riboswitches. Cell 126: 19-22.
    • (2006) Cell , vol.126 , pp. 19-22
    • Nudler, E.1
  • 16
    • 0346687595 scopus 로고    scopus 로고
    • The riboswitch control of bacterial metabolism
    • Nudler, E. and Mironov, A.S. 2004. The riboswitch control of bacterial metabolism. Trends Biochem. Sci. 29: 11-17.
    • (2004) Trends Biochem. Sci , vol.29 , pp. 11-17
    • Nudler, E.1    Mironov, A.S.2
  • 17
    • 34250813107 scopus 로고    scopus 로고
    • Alternative splicing of pre-messenger RNAs in plants in the genomic era
    • Reddy, A.S.N. 2007. Alternative splicing of pre-messenger RNAs in plants in the genomic era. Annu. Rev. Plant Biol. 58: 267-294.
    • (2007) Annu. Rev. Plant Biol , vol.58 , pp. 267-294
    • Reddy, A.S.N.1
  • 18
    • 2242446202 scopus 로고    scopus 로고
    • Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms
    • Rodionov, D.A., Vitreschak, A.G., Mironov, A.A., and Gelfand, M.S. 2002. Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms. J. Biol. Chem. 277: 48949-48959.
    • (2002) J. Biol. Chem , vol.277 , pp. 48949-48959
    • Rodionov, D.A.1    Vitreschak, A.G.2    Mironov, A.A.3    Gelfand, M.S.4
  • 20
    • 33745635350 scopus 로고    scopus 로고
    • Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch
    • Serganov, A., Polonskaia, A., Phan, A.T., Breaker, R.R., and Patel, D.J. 2006. Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch. Nature 441: 1167-1171.
    • (2006) Nature , vol.441 , pp. 1167-1171
    • Serganov, A.1    Polonskaia, A.2    Phan, A.T.3    Breaker, R.R.4    Patel, D.J.5
  • 21
    • 0038136962 scopus 로고    scopus 로고
    • Metabolite-binding RNA domains are present in the genes of eukaryotes
    • Sudarsan, N., Barrick, J.E., and Breaker, R.R. 2003. Metabolite-binding RNA domains are present in the genes of eukaryotes. RNA 9: 644-647.
    • (2003) RNA , vol.9 , pp. 644-647
    • Sudarsan, N.1    Barrick, J.E.2    Breaker, R.R.3
  • 22
    • 28844492215 scopus 로고    scopus 로고
    • Thiamine pyrophosphate riboswitches are targets for the antimicrobial compound pyrithiamine
    • Sudarsan, N., Cohen-Chalamish, S., Nakamura, S., Emilsson, G.M., and Breaker, R.R. 2005. Thiamine pyrophosphate riboswitches are targets for the antimicrobial compound pyrithiamine. Chem. Biol. 12: 1325-1335.
    • (2005) Chem. Biol , vol.12 , pp. 1325-1335
    • Sudarsan, N.1    Cohen-Chalamish, S.2    Nakamura, S.3    Emilsson, G.M.4    Breaker, R.R.5
  • 23
    • 33744469562 scopus 로고    scopus 로고
    • Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand
    • Thore, S., Leibundgut, M., and Ban, N. 2006. Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand. Science 312: 1208-1211.
    • (2006) Science , vol.312 , pp. 1208-1211
    • Thore, S.1    Leibundgut, M.2    Ban, N.3
  • 25
    • 0037206833 scopus 로고    scopus 로고
    • Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression
    • Winkler, W., Nahvi, A., and Breaker, R.R. 2002. Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression. Nature 419: 952-956.
    • (2002) Nature , vol.419 , pp. 952-956
    • Winkler, W.1    Nahvi, A.2    Breaker, R.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.