Purification and characterization of a non-S-RNase and S-RNases from styles of Japanese pear (Pyrus pyrifolia)

Plant Physiology and Biochemistry

Volumn 45, Issue 12, 2007, Pages 878-886

  Norioka, Shigemi ^a   Oneyama, Chitose ^a   Takuma, Seiji ^a   Shinkawa, Toyohide ^a   Ishimizu, Takeshi ^a   Nakanishi, Tetsu ^b   Sakiyama, Fumio ^a  

^a OSAKA UNIVERSITY   (Japan)

^b KOBE UNIVERSITY   (Japan)

Author keywords

Japanese pear; Primary structure; Purification; Ribonuclease; Self incompatibility

Indexed keywords

AMINO ACID; RIBONUCLEASE;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; ENZYMOLOGY; GENETICS; ISOLATION AND PURIFICATION; KINETICS; METABOLISM; MOLECULAR GENETICS; MOLECULAR WEIGHT; PEAR; PH; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; AMINO ACIDS; HYDROGEN-ION CONCENTRATION; KINETICS; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; PYRUS; RIBONUCLEASES; SEQUENCE HOMOLOGY, AMINO ACID;

PYRUS; PYRUS PYRIFOLIA; PYRUS PYRIFOLIA VAR. CULTA;

EID: 36248987307     PISSN: 09819428     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plaphy.2007.09.008     Document Type: Article

References (35)

1. Baily J.M., Rusnak M., and Shively J.E. Compact protein sequencer for the C-terminal sequence analysis of peptides and proteins. Anal. Biochem. 212 (1993) 366-374
2. 8-allele) of Japanese pear (Pyrus pyrifolia Nakai). Plant Biotechnol. 19 (2002) 1-6
3. Clark R.E., Okuley J.J., Collins P.D., and Sims T.L. Sequence variability and developmental expression of S-alleles in self-incompatible and pseude-self-compatible petunia. Plant Cell 2 (1990) 815-826
4. Cornish E.C., Pettitt J.M., Bonig I., and Clarke A.E. Developmentally controlled expression of a gene associated with self-incompatibility in Nicotiana alata. Nature 326 (1987) 99-102
5. Crestfield A.M., Moore S., and Stein W.H. The preparation and enzymatic hydrolysis of reduced and S-carboxymethylated proteins. J. Biol. Chem. 238 (1963) 622-627
6. Dodds P.N., Clarke A.E., and Newbigin E. Molecular characterization of an S-like RNase of Nicotiana alata that is induced by phosphate starvation. Plant Mol. Biol. 31 (1996) 227-238
7. Fischer W.H., and Spiess J. Identification of a mammalian glutaminylcyclase converting glutaminyl into pyroglutamyl peptides. Proc. Natl. Acad. Sci. USA 84 (1987) 3628-3632
8. Huang S., Lee H.-S., Karunanandaa B., and Kao T.-H. Ribonuclease activity of Petunia inflata S proteins is essential for rejection of self-pollen. Plant Cell 6 (1994) 1021-1028
9. Igic B., and Kohn J.R. Evolutionary relationships among self-incompatibility RNases. Proc. Natl. Acad. Sci. U.S.A. 98 (2001) 13167-13171
10. Irie M. Structures and functions of ribonucleases. Yakugaku Zasshi 117 (1997) 561-582
11. 2. Methods Enzymol. 341 (2001) 42-55
12. Ishimizu T., Mitsukami Y., Shinkawa S., Natsuka S., Hase S., Miyagi M., Sakiyama F., and Norioka S. Presence of asparagine-linked N-acetylglucosamine and chitobiose in Pyrus pyrifolia S-RNases associated with gametophytic self-incompatibility. Eur. J. Biochem. 263 (1999) 624-634
13. Ishimizu T., Norioka S., Kanai M., Clarke A.E., and Sakiyama F. Location of cystein and cystine residues in S-ribonucleases associated with gametophytic self-incompatibility. Eur. J. Biochem. 242 (1996) 627-635
14. Ishimizu T., Sato Y., Saito T., Yoshimura Y., Norioka S., Nakanishi T., and Sakiyama F. Identification and partial amino acid sequences of seven S-RNases associated with self-incompatibility of Japanese pear, Pyrus pyrifolia Nakai. J. Biochem. 120 (1996) 326-334
15. Ishimizu T., Shinkawa T., Sakiyama F., and Norioka S. Primary structural features of rosaceous S-RNases associated with gametophytic self-incompatibility. Plant Mol. Biol. 37 (1998) 931-941
16. Iwama M., Ogawa Y., Yamagishi M., Itagaki T., Inokuchi N., Koyama T., Imai R., Ohgi K., Tsuji T., and Irie M. Amino acid sequence and characterization of a rice bran ribonuclease. Biol. Pharm. Bull. 24 (2001) 760-766
17. Jost W., Bak H., Glund K., Terpstra P., and Beintema J.J. Amino acid sequence of an extracellular, phosphate-starvation-induced ribonuclease from cultured tomato (Lycopersicon esculentum) cells. Eur. J. Biochem. 198 (1991) 1-6
18. Lee H.-S., Singh A., and Kao T.-H. RNase X2, a pistil-specific ribonclease from Petunia inflata, shares sequence similarity with solanaceous S proteins. Plant Mol. Biol. 20 (1992) 1131-1141
19. Löffler A., Glund K., and Irie M. Amino acid sequence of an intracellular, phosphate-starvation-induced ribonuclease from cultured tomato (Lycopersicon esculentum) cells. Eur. J. Biochem. 214 (1993) 627-633
20. Ma R.-C., and Oliveira M.M. The RNase PD2 gene of almond (Prunus dulcis) represents an evolutionarily distinct class of S-like RNase genes. Mol. Gen. Genet. 263 (2000) 925-933
21. Matsuura T., Sakai H., Unno M., Ida K., Sato M., Sakiyama F., and Norioka S. Crystal structure at 1.5-Å resolution of Pyrus pyrifolia pistil ribonuclease responsible for gametophytic self-incompatibility. J. Biol. Chem. 276 (2001) 45261-45269
22. McClure B. New views of S-RNase-based self-incompatibility. Curr. Opin. Plant Biol. 9 (2006) 639-646
23. McClure B.A., Haring V., Ebert P.R., Anderson M.A., Simpson R.J., Sakiyama F., and Clarke A.E. Style self-incompatibility gene products of Nicotiana alata are ribonucleases. Nature 342 (1989) 955-957
24. Norioka N., Norioka S., Ohnishi Y., Ishimizu T., Oneyama C., Nakanishi T., and Sakiyama F. Molecular cloning and nucleotide sequences of cDNAs encoding S-allele specific stylar RNases in a self-incompatible cultivar and its self-compatible mutant of Japanese pear, Pyrus pyrifolia Nakai. J. Biochem. 120 (1996) 335-345
25. Ohgi K., Horiuchi H., Watanabe H., Iwama M., Takagi M., and Irie M. Evidence that three histidine residues of a base non-specific and adenylic acid preferential ribonuclease from Rhizopus niveus are involved in the catalytic function. J. Biochem. 112 (1992) 132-138
26. Sassa H., Hirano H., and Ikehashi H. Self-incompatibility-related RNases in styles of Japanese pear. Plant Cell Physiol. 33 (1992) 811-814
27. Sassa H., Hirano H., Nishio T., and Koba T. Style-specific self-compatible mutation caused by deletion of the S-RNase gene in Japanese pear (Pyrus serotina). Plant J. 12 (1997) 223-227
28. 2/S ribonuclease superfamily. Mol. Gen. Genet. 250 (1996) 547-557
29. Simpson R.J., Neuberger M.R., and Liu T.-Y. Complete amino acid analysis of proteins from a single hydrolysate. J. Biol. Chem. 251 (1976) 1936-1940
30. Singh A., Ai Y., and Kao T.-H. Characterization of ribonuclease activity of three S-allele associated proteins of Petunia inflata. Plant Physiol. 96 (1991) 61-68
31. 9-allele in Japanese pear. Euphytica 135 (2004) 157-167
32. Tanaka N., Arai J., Inokuchi N., Koyama T., Ohgi K., Irie M., and Nakamura K.T. Crystal structure of a plant ribonuclease, RNase LE. J. Mol. Biol. 298 (2000) 859-873
33. Tsunasawa S., Kondo J., and Sakiyama F. Isocratic separation of PTH-amino acids at picomole level by reverse-phase HPLC in the presence of sodium dodecylsulfate. J. Biochem. 97 (1985) 701-704
34. VanNerum I., Certral A.C., Oliveira M.M., Keulemans J., and Broothaerts W. PD1, an S-like RNase gene from a self-incompatible cultivar of almond. Plant Cell Reports 19 (2000) 1109-1114
35. Yamane H., Tao R., Mori H., and Sugiura A. Identification of a non-S RNase, a possible ancestral form of S-RNases, in Prunus. Mol. Gen. Genomics 269 (2003) 90-100