-
1
-
-
0018419825
-
Methanogens: Reevaluation of a unique biological group
-
Balch, W. E., G. E. Fox, L. J. agrum, C. R. Woese, and R. S. Wolfe. 1979. Methanogens: reevaluation of a unique biological group. Microbiol. Rev. 43:260-296.
-
(1979)
Microbiol. Rev
, vol.43
, pp. 260-296
-
-
Balch, W.E.1
Fox, G.E.2
agrum, L.J.3
Woese, C.R.4
Wolfe, R.S.5
-
2
-
-
0033774937
-
PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA
-
Bernhard, A. E., and K. G. Field. 2000. PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA. Appl. Environ. Microbiol. 66:4571-4574.
-
(2000)
Appl. Environ. Microbiol
, vol.66
, pp. 4571-4574
-
-
Bernhard, A.E.1
Field, K.G.2
-
3
-
-
20444422471
-
Host distributions of uncultivated fecal Bacteroidales bacteria reveal genetic markers for fecal source identification
-
Dick, L. R., A. E. Bernhard, T. J. Brodeur, J. W. Santo Domingo, J. M. Simpson, S. P. Walters, and K. G. Field. 2005. Host distributions of uncultivated fecal Bacteroidales bacteria reveal genetic markers for fecal source identification. Appl. Environ. Microbiol. 71:3184-3191.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 3184-3191
-
-
Dick, L.R.1
Bernhard, A.E.2
Brodeur, T.J.3
Santo Domingo, J.W.4
Simpson, J.M.5
Walters, S.P.6
Field, K.G.7
-
4
-
-
35948965409
-
-
Translate tool
-
ExPASy Proteomics Server. 1999. Translate tool. http://expasy.org/tools/dna.html.
-
(1999)
ExPASy Proteomics Server
-
-
-
5
-
-
27644532467
-
Methyl-coenzyme M reductase gene: Unique functional markers for methanogenic and anaerobic methane-oxidizing Archaea
-
Friedrich, M. W. 2005. Methyl-coenzyme M reductase gene: unique functional markers for methanogenic and anaerobic methane-oxidizing Archaea. Methods Enzymol. 397:428-442.
-
(2005)
Methods Enzymol
, vol.397
, pp. 428-442
-
-
Friedrich, M.W.1
-
6
-
-
2442562584
-
Practical considerations in design of internal amplification controls for diagnostic PCR assays
-
Hoorfar, J., B. Malorny, A. Abdulmawjood, N. Cook, M. Wagner, and P. Fach. 2004. Practical considerations in design of internal amplification controls for diagnostic PCR assays. J. Clin. Microbiol. 42:1863-1868.
-
(2004)
J. Clin. Microbiol
, vol.42
, pp. 1863-1868
-
-
Hoorfar, J.1
Malorny, B.2
Abdulmawjood, A.3
Cook, N.4
Wagner, M.5
Fach, P.6
-
7
-
-
33646946516
-
Water quality and the grazing animal
-
Hubbard, R. K., G. L. Newton, and G. M. Hill. 2004. Water quality and the grazing animal. J. Anim. Sci. 82(Suppl. E):E255-E263.
-
(2004)
J. Anim. Sci
, vol.82
, Issue.SUPPL. E
-
-
Hubbard, R.K.1
Newton, G.L.2
Hill, G.M.3
-
8
-
-
0036328284
-
A biomarker for the identification of cattle fecal pollution in water using the LTIIa toxin gene from enterotoxigenic Escherichia coli
-
Khatib, L. A., Y. L. Tsai, and B. H. Olson. 2002. A biomarker for the identification of cattle fecal pollution in water using the LTIIa toxin gene from enterotoxigenic Escherichia coli. Appl. Microbiol. Biotechnol. 59:97-104.
-
(2002)
Appl. Microbiol. Biotechnol
, vol.59
, pp. 97-104
-
-
Khatib, L.A.1
Tsai, Y.L.2
Olson, B.H.3
-
9
-
-
0842345377
-
Methanocalculus chunghsingensis sp. nov., isolated from an estuary and a marine fishpond in Taiwan
-
Lai, M. C., C. C. Lin, P. H. Yu, Y. F. Huang, and S. C. Chen. 2004. Methanocalculus chunghsingensis sp. nov., isolated from an estuary and a marine fishpond in Taiwan. Int. J. Syst. Evol. Microbiol. 54:183-189.
-
(2004)
Int. J. Syst. Evol. Microbiol
, vol.54
, pp. 183-189
-
-
Lai, M.C.1
Lin, C.C.2
Yu, P.H.3
Huang, Y.F.4
Chen, S.C.5
-
10
-
-
0030860126
-
Microbial community structure in gastrointestinal tracts of domesticated animals: Comparative analyses using rRNA-targeted oligonucleotide probes
-
Lin, C., L. Raskin, and D. A. Stahl. 1997. Microbial community structure in gastrointestinal tracts of domesticated animals: comparative analyses using rRNA-targeted oligonucleotide probes. FEMS Microbiol. Ecol. 22:281-294.
-
(1997)
FEMS Microbiol. Ecol
, vol.22
, pp. 281-294
-
-
Lin, C.1
Raskin, L.2
Stahl, D.A.3
-
11
-
-
0030805150
-
Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA
-
Øvreås, L., L. Forney, F. L. Daae, and V. Torsvik. 1997. Distribution of bacterioplankton in meromictic Lake Saelenvannet, as determined by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA. Appl. Environ. Microbiol. 63:3367-3373.
-
(1997)
Appl. Environ. Microbiol
, vol.63
, pp. 3367-3373
-
-
Øvreås, L.1
Forney, L.2
Daae, F.L.3
Torsvik, V.4
-
12
-
-
33745130390
-
Competitive metagenomic DNA hybridization identifies host-specific microbial genetic markers in cow fecal samples
-
Shanks, O. C., J. W. Santo Domingo, R. Lamendella, C. A. Kelty, and J. E. Graham. 2006. Competitive metagenomic DNA hybridization identifies host-specific microbial genetic markers in cow fecal samples. Appl. Environ. Microbiol. 72:4054-4060.
-
(2006)
Appl. Environ. Microbiol
, vol.72
, pp. 4054-4060
-
-
Shanks, O.C.1
Santo Domingo, J.W.2
Lamendella, R.3
Kelty, C.A.4
Graham, J.E.5
-
13
-
-
4544357886
-
16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs
-
Skillman, L. C., P. N. Evans, G. E. Naylor, B. Morvan, G. N. Jarvis, and K. N. Joblin. 2004. 16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs. Anaerobe 10:277-285.
-
(2004)
Anaerobe
, vol.10
, pp. 277-285
-
-
Skillman, L.C.1
Evans, P.N.2
Naylor, G.E.3
Morvan, B.4
Jarvis, G.N.5
Joblin, K.N.6
-
14
-
-
0001656490
-
Isolation and characterization of Methanobacterium ruminantium n. sp
-
Smith, P. H., and R. E. Hungate. 1958. Isolation and characterization of Methanobacterium ruminantium n. sp. J. Bacteriol. 75:713-718.
-
(1958)
J. Bacteriol
, vol.75
, pp. 713-718
-
-
Smith, P.H.1
Hungate, R.E.2
-
15
-
-
0035849668
-
Phylogenetic analysis of archaeal 16S rRNA libraries from the rumen suggests the existence of a novel group of archaea not associated with known methanogens
-
Tajima, K., T. Nagamine, H. Matsui, M. Nakamura, and R. I. Aminov. 2001. Phylogenetic analysis of archaeal 16S rRNA libraries from the rumen suggests the existence of a novel group of archaea not associated with known methanogens. FEMS Microbiol. Lett. 200:67-72.
-
(2001)
FEMS Microbiol. Lett
, vol.200
, pp. 67-72
-
-
Tajima, K.1
Nagamine, T.2
Matsui, H.3
Nakamura, M.4
Aminov, R.I.5
-
16
-
-
0032964297
-
Blast 2 sequences - a new tool for comparing protein and nucleotide sequences
-
Tatusova, T. A., and T. L. Madden. 1999. Blast 2 sequences - a new tool for comparing protein and nucleotide sequences. FEMS Microbiol. Lett. 174:247-250.
-
(1999)
FEMS Microbiol. Lett
, vol.174
, pp. 247-250
-
-
Tatusova, T.A.1
Madden, T.L.2
-
17
-
-
33745455754
-
Detection of the nifH gene of Methanobrevibacter smithii: A potential tool to identify sewage pollution in recreational waters
-
Ufnar, J. A., S. Wang, J. M. Christiansen, H. Yampara-Iquise, C. A. Carson, and R. D. Ellender. 2006. Detection of the nifH gene of Methanobrevibacter smithii: a potential tool to identify sewage pollution in recreational waters. J. Appl. Microbiol. 101:44-52.
-
(2006)
J. Appl. Microbiol
, vol.101
, pp. 44-52
-
-
Ufnar, J.A.1
Wang, S.2
Christiansen, J.M.3
Yampara-Iquise, H.4
Carson, C.A.5
Ellender, R.D.6
-
18
-
-
34548204320
-
Development of a swine-specific fecal pollution marker based on host differences in methanogen mcrA genes
-
Ufnar, J. A., D. F. Ufnar, S. Y. Wang, and R. D. Ellender. 2007. Development of a swine-specific fecal pollution marker based on host differences in methanogen mcrA genes. Appl. Environ. Microbiol. 73:5209-5217.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 5209-5217
-
-
Ufnar, J.A.1
Ufnar, D.F.2
Wang, S.Y.3
Ellender, R.D.4
-
19
-
-
35948998652
-
-
Census of agriculture
-
USDA. 2002. Census of agriculture. http://www.agcensus.usda.gov/.
-
(2002)
-
-
-
20
-
-
35948982367
-
-
USEPA. 1986. Ambient water quality criteria for bacteria - 1986. http://www.epa.gov/waterscience/beaches/files/1986crit.pdf.
-
USEPA. 1986. Ambient water quality criteria for bacteria - 1986. http://www.epa.gov/waterscience/beaches/files/1986crit.pdf.
-
-
-
-
21
-
-
3142580313
-
Phylogenetic analysis of methanogens from the bovine rumen
-
Whitford, M. F., R. M. Teather, and R. J. Forster. 2001. Phylogenetic analysis of methanogens from the bovine rumen. BMC Microbiol. 1:5. http://www.biomedcentral.com/1471-2180/1/5.
-
(2001)
BMC Microbiol
, vol.1
, pp. 5
-
-
Whitford, M.F.1
Teather, R.M.2
Forster, R.J.3
-
22
-
-
0036226686
-
The potential impact of flooding on confined animal feeding operations in eastern North Carolina
-
Wing, S., S. Freedman, and L. Band. 2002. The potential impact of flooding on confined animal feeding operations in eastern North Carolina. Environ. Health Perspect. 110:387-391.
-
(2002)
Environ. Health Perspect
, vol.110
, pp. 387-391
-
-
Wing, S.1
Freedman, S.2
Band, L.3
-
23
-
-
1642408693
-
Molecular diversity of rumen methanogens from sheep in Western Australia
-
Wright, A. D. G., A. J. Williams, B. Winder, C. T. Christophersen, S. L. Rodgers, and K. D. Smith. 2004. Molecular diversity of rumen methanogens from sheep in Western Australia. Appl. Environ. Microbiol. 70:1263-1270.
-
(2004)
Appl. Environ. Microbiol
, vol.70
, pp. 1263-1270
-
-
Wright, A.D.G.1
Williams, A.J.2
Winder, B.3
Christophersen, C.T.4
Rodgers, S.L.5
Smith, K.D.6
|