Induction and preliminary characterization of a novel halophage SNJ1 from lysogenic Natrinema sp. F5

Canadian Journal of Microbiology

Volumn 53, Issue 9, 2007, Pages 1106-1110

  Mei, Yunjun ^a   Chen, Jin ^a   Sun, Dongchang ^a   Chen, Dong ^a   Yang, Yang ^b   Shen, Ping ^a   Chen, Xiangdong ^a  

^a WUHAN UNIVERSITY   (China)

^b INSTITUTE OF HYDROBIOLOGY   (China)

Author keywords

Haloarchaea; Halophage; Mitomycin C; Natrinema sp. strain F5; Natrinema sp. strain J7

Indexed keywords

ADSORPTION; CHARACTERIZATION; MORPHOLOGY; PROTEINS; SODIUM CHLORIDE;

HALOARCHAEA; HALOPHAGE; MITOMYCIN C;

BACTERIA;

MITOMYCIN C; SODIUM CHLORIDE;

ADSORPTION; HALOPHYTE; MORPHOLOGY; PROKARYOTE; SALINITY; SODIUM CHLORIDE; TAXONOMY;

ADSORPTION; ARTICLE; BACTERIAL STRAIN; BACTERIOPHAGE; CONCENTRATION RESPONSE; HALOPHAGE SNJ1; LYSOGENIZATION; MICROMORPHOLOGY; NONHUMAN; PLAQUE FORMING CELL; PRIORITY JOURNAL; SALINITY; VIRUS CULTURE;

ARCHAEAL VIRUSES; HALOBACTERIACEAE; LYSOGENY; MITOMYCIN; PLAQUE ASSAY; SIPHOVIRIDAE; SODIUM CHLORIDE; VIRUS ACTIVATION;

HALOBACTERIA; NATRINEMA; SIPHOVIRIDAE;

EID: 35948955875     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/W07-072     Document Type: Article

References (33)

1. Abedon, S.T., Herschier, T.D., and Stopar, D. 2001. Bacteriophage latent period evolution as a response to resource availability. Appl. Environ. Microbiol. 67: 4233-4241. doi:10.1128/AEM.67.9.4233-4241.2001.
2. Ackermann, H.-W. 2007. Phages examined in the electron microscope. Arch. Virol. 152: 227-243. doi:10.1007/s00705-006-0849-1.
3. Bamford, D.H., Ravantti, JJ., Rönnholm, G., Laurinavičius, S., Kukkaro, P., Dyall-Smith, M., et al. 2005. Constituents of SH1, a novel lipid-containing virus infecting the halophilic Euryarchaeon Haloarcula hispanica. J. Virol. 79: 9097-9107. doi: 10.1128/JVI.79.14.9097-9107. 2005.
4. Bath, C., and Dyall-Smith, M.L. 1998. His1, an archaeal virus of the Fuselloviridae family that infects Haloarcula hispanica. J. Virol. 72: 9392-9395.
5. Bath, C., Cukalac, T., Porter, K., and Dyall-Smith, M.L. 2006. His1 and His2 are distantly related, spindle-shaped haloviruses belonging to the novel virus group, Salterprovirus. Virology, 350: 228-239. doi:10.1016/j.virol.2006.02.005.
6. Calendar, R. 2004. The bacteriophages. 2nd ed. Oxford University Press, UK.
7. Daniels, L.L., and Wais, A. 1990. Ecophysiology of bacteriophage S5100 infecting Halobacterium cutirubrum. Appl. Environ. Microbiol. 56: 3605-3608.
8. Dyall-Smith, M., Tang, S.-L., and Bath, C. 2003. Haloarchaeal viruses: How diverse are they? Res. Microbiol. 154: 309-313. doi:10.1016/S0923- 2508(03)00076-7.
9. Gropp, F., Palm, P., and Zillig, W. 1989. Expression and regulation of Halobacterium halobium phage φH genes. Can. J. Microbiol. 35: 182-188.
10. Gropp, F., Grampp, B., Stolt, P., Palm, P., and Zilig, W. 1992. The immunity-conferring plasmid pφHL from the Halobacterium salinarium phage φH: nucleotide sequence and transcription. Virology, 190: 45-54. doi:10.1016/0042-6822(92)91191-V.
11. Holmes, M.L., and Dyall-Smith, M.L. 1990. A plasmid vector with a selectable marker for halophilic archaebacteria. J. Bacteriol. 172: 756-761.
12. Klein, R., Baranyi, U., Rössler, N., Greineder, B., Scholz, H., and Witte, A. 2002. Natrialba magadii virus φCH1: first complete nucleotide sequence and functional organization of a virus infecting a haloalkaliphilic archaeon. Mol. Microbiol. 45: 851-863. doi:10.1046/j.1365-2958.2002.03064.x.
13. Nuttall, S.D, and Dyall-Smith, M.L. 1993. HF1 and HF2: Novel bacteriophages of halophilic archaea. Virology, 197: 678-684. doi:10.1006/viro.1993.1643.
14. Pauling, C. 1982. Bacteriophages of Halobacterium halobium: isolation from fermented fish sauce and primary characterization. Can. J. Microbiol. 28: 916-921.
15. Porter, K., Kukkaro, P., Bamford, J.K.H., Bath, C., Kivelä, H.M., Dyall-Smith, M.L., and Bamford, D.H. 2005. SH1: a novel, spherical halovirus isolated from an Australian hypersaline lake. Virology, 335: 22-33. doi:10.1016/j.virol.2005.01.043.
16. Reiter, W.D., Zillig, W., and Palm, P. 1988. Archaebacterial viruses. Adv. Virus Res. 34: 143-188.
17. Schnabel, H., Schramm, E., Schnabel, R., and Zillig, W. 1982a. Structural variability in the genome of phage φH of Halobacterium halobium. Mol. Gen. Genet. 188: 370-37. doi:10.1007/BF00330036.
18. Schnabel, H., Zillig, W., Pfäffle, M., Schnabel, R., Michel, H., and Delius, H. 1982b. Halobacterium halobium phage φH. EMBO J. 1: 87-92.
19. Shen, P., and Chen, YJ. 1994. Plasmid from Halobacterium halobium and its restriction map. Chin. J. Genet. 21: 409-416.
20. Sillankorva, S., Oliveira, R., Vieira, M.J., Sutherland, I., and Azeredo, J. 2004. Pseudomonas fluorescens infection by bacteriophage φS1: the influence of temperature, host growth and media. FEMS Microbiol. Lett. 241: 13-20. doi:10.1016/j.femsle.2004.06.058.
21. Stolt, P., and Zillig, W. 1992. In vivo studies on the effects of immunity genes on early lytic transcription in the Halobacterium salinarium phage φH. Mol. Gen. Genet. 235: 197-204. doi: 10.1007/BF00279361.
22. Stolt, P., and Zillig, W. 1993a. In vivo and in vitro analysis of transcription of the L region from the Halobacterium salinarium phage φH: definition of a repressor-enhancing gene. Virology, 195: 649-658. doi:10.1006/viro.1993.1416.
23. Stolt, P., and Zillig, W. 1993b. Antisense RNA mediates transcriptional processing in an archaebacterium, indicating a novel kind of RNAse activity. Mol. Microbiol. 7: 875-882. doi: 10.1111/j.1365-2958. 1993.tb01178.x.
24. Stolt, P., and Zillig, W. 1993c. Structure specific ds/ss-RNAse activity in the extreme halophile Halobacterium salinarium. Nucleic Acids Res. 21: 5595-5599. doi: 10.1093/nar/21.24.5595.
25. Stolt, P., and Zillig, W. 1994a. Transcription of the halophage φH repressor gene is abolished by transcription from an inversely oriented lytic promoter. FEBS Lett. 344: 125-128. doi:10.1016/0014-5793(94)00347- 5.
26. Stolt, P., and Zillig, W. 1994b. Gene regulation in halophage φH-more than promoters. Syst. Appl. Microbiol. 16: 591-596.
27. Tang, S.L., Nuttall, S., Ngui, K., Fisher, C., Lopez, P., and Dyall-Smith, M. 2002. HF2: a double-stranded DNA tailed halobacterium virus with a mosaic genome. Mol. Microbiol. 44: 283-296. doi:10.1046/j.1365-2958. 2002.02890.x.
28. Tang, S.-L., Nuttall, S., and Dyall-Smith, M. 2004. Haloviruses HF1 and HF2: evidence for a recent and large recombination event. J. Bacteriol. 186: 2810-2817. doi:10.1128/JB.186.9.2810-2817.2004.
29. Torsvik, T., and Dundas, I.D. 1974. Bacteriophage of Halobacterium salinarium. Nature (London), 248: 680-681. doi: 10.1038/248680a0.
30. Torsvik, T., and Dundas, I.D. 1980. Persisting phage infection in Halobacterium salinarium str. 1. J. Gen. Virol. 47: 29-36.
31. Wais, A.C., Kon, M., MacDonald, R.E., and Stollar, B.D. 1975. Salt-dependent bacteriophage infecting Halobacterium cutirubrum and Halobacterium halobium. Nature (London), 256: 314-315. doi:10.1038/256314a0.
32. You, L., Suthers, P.F., and Yin, J. 2002. Effects of Escherichia coli physiology on growth of phage T7 in vivo and in silico. J. Bacteriol. 184: 1888-1894. doi:10.1128/JB.184.7.1888-1894.2002.
33. Yu, M.X., Slater, M.R., and Ackermann, H.-W. 2006. Isolation and characterization of Thermus bacteriophages. Arch. Virol. 151: 663-679. doi:10.1007/s00705-005-0667-x.