Burkholderia bryophila sp. nov. and Burkholderia megapolitana sp. nov., moss-associated species with antifungal and plant-growth-promoting properties

International Journal of Systematic and Evolutionary Microbiology

Volumn 57, Issue 10, 2007, Pages 2228-2235

  Vandamme, Peter ^a   Opelt, Katja ^b,c   Knöchel, Nadine ^b   Berg, Christian ^d   Schönmann, Susan ^e   De Brandt, Evie ^a   Eberl, Leo ^e   Falsen, Enevold ^f   Berg, Gabriele ^b,c  

^a GHENT UNIVERSITY   (Belgium)

^b UNIVERSITY OF ROSTOCK   (Germany)

^c GRAZ UNIVERSITY OF TECHNOLOGY   (Austria)

^d UNIVERSITY OF GRAZ   (Austria)

^e UNIVERSITY OF ZURICH   (Switzerland)

^f UNIVERSITY OF GOTHENBURG   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; GROWTH PROMOTOR;

AGRICULTURE; ANTIFUNGAL ACTIVITY; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATION; BALTIC SEA; BURKHOLDERIA; BURKHOLDERIA BRYOPHILA; BURKHOLDERIA MEGAPOLITANA; CHEMICAL ANALYSIS; CONTROLLED STUDY; DNA DNA HYBRIDIZATION; GAMETOPHYTE; GERMANY; GRASSLAND; MOSS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT GROWTH; PLANT NUTRIENT; PRIORITY JOURNAL; SEASHORE; SOIL; SPHAGNUM; TAXONOMY;

ANTIBIOSIS; ANTIFUNGAL AGENTS; BRYOPHYTA; BURKHOLDERIA; DNA, BACTERIAL; DNA, RIBOSOMAL; GENES, RRNA; GERMANY; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; PLANT GROWTH REGULATORS; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID;

AULACOMNIUM PALUSTRE; BRYOPHYTA; BURKHOLDERIA; SPHAGNUM RUBELLUM;

EID: 35649005948     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.65142-0     Document Type: Article

References (29)

1. Belova, S. E., Pankratov, T. A. & Dedysh, S. N. (2006). Bacteria of the genus Burkholderia as a typical component of the microbial community of Sphagnum peat bogs. Microbiology (English translation of Mikrobiologiia) 75, 90-96.
2. Brown, C. M. & Dilworth, M. J. (1975). Ammonia assimilation by Rhizobium cultures and bacteroids. J Gen Microbiol 86, 39-48.
3. Chen, W.-M., James, E. K, Coenye, T., Chou, J.-H., Barrios, E., de Faria, S. M., Elliott, G. N, Sheu, S.-Y., Sprent J. I. & Vandamme, P. (2006). Burkholderia mimosarum sp. nov., isolated from root nodules of Mimosa spp. from Taiwan and South America. Int J Syst Evol Microbiol 56, 1847-1851.
4. Chernin, L, Ismailov, Z., Haran, S. & Chet I. (1995). Chitinolytic Enterobacter agglomerans antagonistic to fungal plant pathogens. Appl Environ Microbiol 61, 1720-1726.
5. Coenye, T., Falsen, E., Vancanneyt M., Hoste, B., Govan, J. R. W., Kersters, K. & Vandamme, P. (1999). Classification of some Alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov. Int J Syst Bacteriol 49, 405-413.
6. Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
7. 2-fixing isolates from rice in Vietnam. Int J Syst Bacteriol 45, 274-289.
8. Govan, J. R. W., Hughes, J. E. & Vandamme, P. (1996). Burkholderia cepacia: Medical, taxonomic and ecological issues. J Med Microbiol 45, 395-407.
9. Holmes, A., Govan, J. & Goldstein, R. (1998). Agricultural use of Burkholderia (Pseudomonas) cepacia: A threat to human health? Emerg Infect Dis 4, 221-227.
10. Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G + C content of deoxyribonucleic aid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
11. Opelt, K. & Berg, G. (2004). Diversity and antagonistic potential of bacteria associated with bryophytes from nutrient-poor habitats of the Baltic Sea Coast. Appl Environ Microbiol 70, 6569-6579.
12. Parke, J. L. & Gurian-Sherman, D. (2001). Diversity of the Burkholderia cepacia complex and implications for risk assessment of biological control strains. Annu Rev Phytopathol 39, 225-258.
13. Perin, L., Martínez-Aguilar, L, Paredes-Valdez, G., Baldani, J. I., Estrada-de los Santos, P., Reis, V. M. & Caballero-Mellado, J. (2006). Burkholderia silvatlantica sp. nov., a diazotrophic bacterium associated with sugar cane and maize. Int J Syst Evol Microbiol 56, 1931-1937.
14. Pitcher, D. G., Saunders, N. A. & Owen, R. J. (1989). Rapid extraction of bacterial genomic DNA with guanidiurn thiocyanate. Lett Appl Microbiol 8, 151-156.
15. Pot B., Vandamme, P. & Kersters, K (1994). Analysis of electrophoretic whole-organism protein fingerprints. In Chemical Methods in Prokaryotic Systematics, pp. 493-521. Edited by M. Goodfellow & A. G. O'Donnell. Chichester: Wiley.
16. Precker, A. (2000). The nature reserve "Ribnitzer Großes Moor" - restitution and tourism in a complex mire ecosystem of northern Germany. Telma 30, 43-75.
17. Reis, V. M., Estrada-de los Santos, P., Tenorio-Salgado, S., Vogel, J., Stoffels, M., Guyon, S., Mavingui, P., Baldani, V. L. D., Schmid, M. & other authors (2004). Burkholderia tropica sp. nov., a novel nitrogen-fixing, plant-associated bacterium. Int J Syst Evol Microbiol 54, 2155-2162.
18. Richardson, J., Stead, D. E, Elphinstone, J. G. & Coutts, R. H. (2002). Diversity of Burkholderia isolates from woodland rhizosphere environments. J Appl Microbiol 93, 616-630.
19. Salles, J. F., Samyn, E. Vandamme, P., van Veen, J. A. & Van Elsas, J. D. (2006). Changes in agricultural management drive the diversity of Burkholderia species isolated from soil on PCAT medium. Soil Biol Biochem 38, 661-673.
20. Sarwar, M. & Kremer, R. J. (1995). Determination of bacterially derived auxins using a microplate method. Lett Appl Microbiol 20, 282-285.
21. Schwyn, B. & Neilands, J. B. (1987). Universal chemical assay for the detection and determination of siderophores. Anal Biochem 160, 47-56.
22. Sessitsch, A., Coenye, T., Sturz, A. V., Vandamme, P., Ait Barka, E., Salles, J. F., Van Elsas, J. D., Faure, D., Reiter, B. & other authors (2005). Burkholderia phytofirmans sp. nov., a novel plant-associated bacterium with plant-beneficial properties. Int J Syst Evol Microbiol 55, 1187-1192.
23. Steidle, A, Sigl K., Schuhegger, R., Ihring, A., Schmid, M., Gantner, S., Stoffels, M., Riedel, K, Givskov, M. & other authors (2001). Visualization of N-acylhomoserine lactone-mediated cell-cell communication between bacteria colonizing the tomato rhizosphere. Appl Environ Microbiol 67, 5761-5770.
24. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
25. Vandamme, P., Gillis, M., Vancanneyt, M., Hoste, B., Kersters, K. & Falsen, E. (1993). Moraxella lincolnii sp. nov., isolated from the human respiratory tract, and reevaluation of the taxonomic position of Moraxella osloensis. Int J Syst Bacteriol 43, 474-481.
26. Vandamme, P., Goris, J., Chen, W. M., de Vos, P. & Willems, A. (2002). Burkholderia tuberum sp. nov. and Burkholderia phymatum sp. nov., nodulate the roots of tropical legumes. Syst Appl Microbiol 25, 507-512.
27. Vandamme, P., Govan, J. R. W. & LiPuma, J. J. (2007). Diversity and role of Burkholderia spp. In Burkholderia: Molecular Microbiology and Genomics, pp. 1-28. Edited by T. Coenye & P. Vandamme. Wymondham, UK: Horizon Bioscience.
28. Van Oevelen, S, De Wachter, R., Vandamme, P., Robbrecht, E. & Prinsen, E. (2002). Identification of the bacterial endosymbionts in leaf galls of Psychotria (Rubiaceae, angiosperms) and proposal of 'Candidatus Burkholderia kirkii' sp. nov. Int J Syst Evol Microbiol 52, 2023-2027.
29. Van Oevelen, S., De Wachter, R., Vandamme, P., Robbrecht, E. & Prinsen, E. (2004). 'Candidatus Burkholderia calva' and ' Candidatus Burkholderia nigropunctata' as leaf gall endosymbionts of African Psychotria. Int J Syst Evol Microbiol 54, 2237-2239.