Altererythrobacter epoxidivorans gen. nov., sp. nov., an epoxide hydrolase-active, mesophilic marine bacterium isolated form cold-seep sediment, and reclassification of Erythrobacter luteolus Yoon et al. 2005 as Altererythrobacter luteolus comb. nov

International Journal of Systematic and Evolutionary Microbiology

Volumn 57, Issue 10, 2007, Pages 2207-2211

  Kwon, Kae Kyoung ^a   Woo, Jung Hee ^a   Yang, Sung Hyun ^a   Kang, Ji Hyun ^a   Kang, Sung Kang ^a   Kim, Sang Jin ^a   Sato, Takako ^b   Kato, Chiaki ^b  

^a Korea Research Institute of Ships and Ocean Engineering   (South Korea)

^b JAPAN AGENCY FOR MARINE EARTH SCIENCE AND TECHNOLOGY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOCHLOROPHYLL A; CALCIUM CHLORIDE; CYCLOPROPANE; CYTOSINE; DNA; EPOXIDE HYDROLASE; FATTY ACID DERIVATIVE; GUANINE; MAGNESIUM CHLORIDE; RNA 16S; SODIUM CHLORIDE; UBIQUINONE;

ALTERERYTHROBACTER EPOXIDIVORANS; ALTERERYTHROBACTER LUTEOLUS; ARTICLE; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; CLASSIFICATION; COLD SEEP SPECIES; CONTROLLED STUDY; DNA CONTENT; GENE SEQUENCE; GENETIC SIMILARITY; MARINE BACTERIUM; MESOPHILIC BACTERIUM; NEW GENUS; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PH MEASUREMENT; PHYLOGENY; PHYLUM; PRIORITY JOURNAL; SEDIMENT; SPECIES DIFFERENCE; SPHINGOMONADACEAE; TAXONOMY; TEMPERATURE MEASUREMENT;

ALPHAPROTEOBACTERIA; BACTERIOCHLOROPHYLL A; BASE COMPOSITION; CALCIUM CHLORIDE; DNA, BACTERIAL; DNA, RIBOSOMAL; EPOXIDE HYDROLASES; FATTY ACIDS; GENES, RRNA; GEOLOGIC SEDIMENTS; HYDROGEN-ION CONCENTRATION; MAGNESIUM CHLORIDE; MOLECULAR SEQUENCE DATA; PHYLOGENY; QUINONES; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SODIUM CHLORIDE; TEMPERATURE;

BACTERIA (MICROORGANISMS); ERYTHROBACTER; ERYTHROBACTER LUTEOLUS; ERYTHROBACTERACEAE; PORPHYROBACTER; SPHINGOMONADACEAE;

EID: 35648989973     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64863-0     Document Type: Article

References (19)

1. Collins, M. D. (1985). Isoprenoid quinone analysis in bacterial classification and identification. In Chemical Methods in Bacterial Systematics, pp. 267-287. Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press.
2. Danner, E. B. M., Vybiral, D., Koblížek, M., Kämpfer, P., Busse, H.-J. & Velimirov, B. (2002). Erythrobacter citreus sp. nov., a yellow-pigmented bacterium that lacks bacteriochlorophyll a, isolated from the western Mediterranean Sea. Int J Syst Evol Microbiol 52, 1655-1661.
3. Hanada, S., Kawase, Y., Hiraishi, A., Takaichi, S., Matsuura, K., Shimada, K. & Nagashima, K (1997). Porphyrobacter tepidarius sp. nov., a moderately thermophilic aerobic photosynthetic bacterium isolated from a hot spring. Int J Syst Bacteriol 47, 408-413.
4. VP. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part C, pp. 275-279. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
5. Hiraishi, A., Yonemitsu, Y., Matsushita, M., Shin, Y. K., Kuraishi, H. & Kawahara, K. (2002). Characterization of Porphyrobacter sanguineus sp. nov., an aerobic bacteriochlorophyll-containing bacterium capable of degrading biphenyl and dibenzofuran. Arch Microbiol 178, 45-52.
6. Kwon, K. K., Lee, H.-S., Yang, S. H. & Kim, S.-J. (2005). Kordiimonas gwangyangensis gen. nov., sp. nov., a marine bacterium isolated from marine sediments that forms a distinct phyletic lineage (Kordiimonadales ord. nov.) in the 'Alphaproteobacteria'. Int J Syst Evol Microbiol 55, 2033-2037.
7. Lee, K.-B., Liu, C.-T., Anzai, Y., Kim, H., Aono, T. & Oyaizu, H. (2005). The hierarchical system of the 'Alphaproteobacteria': description of Hyphomonadaceae fam. nov., Xanthobacteraceae fam. nov. and Erythrobacteraceae fam. nov. Int J Syst Evol Microbiol 55, 1907-1919.
8. VP. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part C, pp. 267-268. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
9. VP emend. Hiraishi, Kuraishi and Kawahara. 2000a, 1117. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part C, pp. 258-263. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
10. Sohn, J. H., Kwon, K. K, Kang, J.-H., Jung, H.-B. & Kim, S.-J. (2004). Novosphingobium pentaromativorans sp. nov., a high-molecular-mass polycyclic aromatic hydrocarbon-degrading bacterium isolated from estuarine sediment. Int J Syst Evol Microbiol 54, 1483-1487.
11. Stackebrandt, E. & Liesack, W. (1993). Nucleic acids and classification. In Handbook of New Bacterial Systematics, pp. 158-160. Edited by M. Goodfellow & A. G. O'Donnell. London: Academic Press.
12. Woo, J. H., Hwang, Y. O., Kang, S. G., Lee, H. S., Cho, J. C. & Kim, S.-J. (2007). Cloning and characterization of three epoxide hydrolases from a marine bacterium, Erythrobacter litoralis HTCC2594. Appl Microbiol Biotechnol 76, 365-375.
13. Yoon, J.-H., Kim, H., Kim, I.-G., Kang, K. H. & Park, Y.-H. (2003). Erythrobacter flavus sp. nov., a slight halophile from the East Sea in Korea. Int J Syst Evol Microbiol 53, 1169-1174.
14. Yoon, J.-H., Lee, M.-H. & Oh, T.-K. (2004). Porphyrobacter donghaensis sp. nov., isolated from sea water of the East Sea in Korea. Int J Syst Evol Microbiol 54, 2231-2235.
15. Yoon, J.-H., Kang, K. H., Yeo, S.-H. & Oh, T.-K. (2005). Erythrobacter luteolus sp. nov., isolated from a tidal flat of the Yellow Sea in Korea. Int J Syst Evol Microbiol 55, 1167-1170.
16. Yoon, J.-H., Kang, S.-J., Lee, M.-H., Oh, H. W. & Oh, T.-K. (2006). Porphyrobacter dokdonensis sp. nov., isolated from sea water. Int J Syst Evol Microbiol 56, 1079-1083.
17. Yurkov, V. V. (2005a). Genus III. "Citromicrobium" Yurkov, Krieger, Stackebrandt and Beatty 1999, 4523. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part C, pp. 263-266. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
18. VP. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 2, part C, pp. 268-273. Edited by D. J. Brenner, N. R. Krieg, J. T. Staley & G. M. Garrity. New York: Springer.
19. Yurkov, V. V., Krieger, S., Stackebrandt, E. & Beatty, J. T. (1999). Citromicrobium bathyomarinum, a novel aerobic bacterium isolated from deep-sea hydrothermal vent plume waters that contains photosynthetic pigment-protein complexes. J Bacteriol 181, 4517-4525.